FFCP PHASE1:Hg19::chr2:55561666..55561683,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25523 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-180bp_to_ENST00000468534_5end | |||
|cluster_id=chr2:55561666..55561683,- | |||
|description=CAGE_peak_2_at_CCDC88A_5end | |||
|id=chr2:55561666..55561683,- | |||
|ontology_enrichment_celltype=CL:0002194!2.92e-11!63;CL:0000576!2.92e-11!63;CL:0000040!2.92e-11!63;CL:0000559!2.92e-11!63;CL:0002009!2.70e-10!65;CL:0000839!5.49e-10!70;CL:0000763!5.43e-09!112;CL:0000049!5.43e-09!112;CL:0000860!1.18e-08!45;CL:0000557!1.69e-08!71;CL:0002057!5.53e-08!42;CL:0000766!1.26e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.51e-08;39!CL:0000234;7.51e-08;39!CL:0000860;2.69e-07;33!CL:0002057;2.69e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.92e-08,48;CL:0000234,3.92e-08,48;CL:0002194,2.80e-07,59;CL:0000576,2.80e-07,59;CL:0000040,2.80e-07,59;CL:0000559,2.80e-07,59;CL:0002009,6.90e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.70e-09!239;DOID:162!3.21e-09!235;DOID:2531!3.12e-08!51;DOID:0060083!3.12e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.82e-13!82;UBERON:0005743!8.21e-12!86;UBERON:0000073!1.91e-11!94;UBERON:0001016!1.91e-11!94;UBERON:0001049!2.63e-11!57;UBERON:0005068!2.63e-11!57;UBERON:0006241!2.63e-11!57;UBERON:0007135!2.63e-11!57;UBERON:0000955!1.04e-10!69;UBERON:0006238!1.04e-10!69;UBERON:0002020!9.20e-10!34;UBERON:0003528!9.20e-10!34;UBERON:0002616!1.61e-09!59;UBERON:0002780!2.94e-09!41;UBERON:0001890!2.94e-09!41;UBERON:0006240!2.94e-09!41;UBERON:0002346!4.87e-09!90;UBERON:0003080!1.05e-08!42;UBERON:0002791!2.01e-08!33;UBERON:0001893!7.74e-08!34;UBERON:0003075!9.00e-08!86;UBERON:0007284!9.00e-08!86;UBERON:0001869!1.72e-07!32;UBERON:0001474!5.37e-07!86;UBERON:0002371!9.29e-07!80;UBERON:0000956!9.35e-07!25;UBERON:0000203!9.35e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.26e-15;34!UBERON:0002020;6.26e-15;34!UBERON:0002791;9.95e-14;32!UBERON:0000073;5.04e-13;53!UBERON:0002616;5.04e-13;53!UBERON:0001869;3.78e-12;32!UBERON:0002619;4.16e-12;22!UBERON:0000956;6.44e-12;25!UBERON:0000203;6.44e-12;25!UBERON:0001893;7.20e-12;34!UBERON:0001950;2.12e-11;20!UBERON:0002780;2.91e-11;41!UBERON:0001890;2.91e-11;41!UBERON:0000955;1.66e-08;68!UBERON:0001017;2.32e-08;75!UBERON:0001016;4.02e-08;83!UBERON:0002420;7.24e-08;9!UBERON:0007245;7.24e-08;9!UBERON:0010009;7.24e-08;9!UBERON:0010011;7.24e-08;9!UBERON:0000454;7.24e-08;9!UBERON:0000125;8.73e-08;9!UBERON:0002308;8.73e-08;9!UBERON:0001871;3.92e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.12e-21,56;UBERON:0005068,1.12e-21,56;UBERON:0006241,1.12e-21,56;UBERON:0007135,1.12e-21,56;UBERON:0000073,9.19e-20,53;UBERON:0002616,9.19e-20,53;UBERON:0001017,7.99e-19,81;UBERON:0003528,1.45e-18,34;UBERON:0002020,1.45e-18,34;UBERON:0002346,1.21e-17,86;UBERON:0000955,4.79e-17,68;UBERON:0006238,4.79e-17,68;UBERON:0003075,2.07e-16,82;UBERON:0007284,2.07e-16,82;UBERON:0002780,4.71e-16,41;UBERON:0001890,4.71e-16,41;UBERON:0003080,4.71e-16,41;UBERON:0006240,4.71e-16,41;UBERON:0001016,5.90e-16,89;UBERON:0002791,6.05e-16,32;UBERON:0001893,1.03e-14,34;UBERON:0001869,5.95e-14,32;UBERON:0010371,1.07e-12,104;UBERON:0002619,1.90e-12,22;UBERON:0000956,2.31e-12,25;UBERON:0000203,2.31e-12,25;UBERON:0003056,5.02e-12,61;UBERON:0001950,9.93e-12,20;UBERON:0004121,4.74e-10,171;UBERON:0000924,4.74e-10,171;UBERON:0006601,4.74e-10,171;UBERON:0002420,4.88e-08,9;UBERON:0007245,4.88e-08,9;UBERON:0010009,4.88e-08,9;UBERON:0010011,4.88e-08,9;UBERON:0000454,4.88e-08,9;UBERON:0000125,6.16e-08,9;UBERON:0002308,6.16e-08,9;UBERON:0010314,1.42e-07,132;UBERON:0001871,2.44e-07,6;UBERON:0003076,7.20e-07,15;UBERON:0003057,7.20e-07,15 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,1.77936752594749,0.502170558379211,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,1.47187681102573,2.27470771979874,0,0.553995408531877,0.802177789880567,1.51907609501096,0.223915474239924,0,0,1.89017710413434,0.377875943688809,0.970336244751265,1.16214518452842,1.6446715520873,0.309706370895104,2.01384674625505,1.5369642391746,0.236482229888585,2.41321976515633,0.645484683583826,0,2.82363509313907,0.272906150057846,0,0.612167784741805,0.320929027076094,1.27867425159808,0.329851300186716,1.59570926097305,0.426224750532694,8.41606792022894,1.13477044938228,0,3.51748131359441,5.21482918420201,0.217188844705117,2.42159801053347,0.736555271975129,0,0.211255286311942,0.425208599930087,0.209658645508376,0.898629049171961,0.300353785683013,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0.670700859703636,0,0,0.50133791063589,1.15877215168659,0,0,0.378139268656271,1.10864698731282,1.22968699970376,0.130979075497713,0,0,0.97364218096405,0.174129737299267,1.46253756570752,1.66943437013739,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0,0.709336764396714,0.560677600142307,0,0,0,0,0,0,0.576175924479999,0,0.312160076830321,0,0.896692083310806,0.117434498643765,0,0,0,1.35117749042945,0.103325781175765,0,1.48360157567134,0,0,0.336672227908132,0.375355559615893,0,0,0.30648779579902,0,0.226864366320042,0,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0,0.339121184620975,0.193260853163297,0,0.286804595389004,0.487894824518382,0.132529768321485,0.232387885739037,1.14027160516907,0.504641701751257,1.45990943630332,0,0.643240938192885,0,1.39310378409594,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0.982827216677626,0,1.7658523976586,0,0,0,0,0.201057944823262,0.185176890317059,0,0,2.88662684050547,0.34779121492523,0,0,0.462985512576611,0,0,0,0.738651018262192,0.234004265139238,1.48631162288728,0,0.335964256397719,0,0.179117045405697,0.581267877027924,0,0,0.176096868026452,0.207328115540772,0,0,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0.1466765716419,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0.355391948742546,1.58390374586686,0.301439377059586,0,0.599837947092342,0,2.00902836572851,4.21667878966063,0.239624855491583,0,0,0,0.205476322550383,0.358121926479791,0.224170287987055,0.394061520403854,0.215627574859517,0.513372145118994,0.508189248444927,0,1.54657762555539,0.502548796003046,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0.535286966391485,0.157702415033935,0.35142424497814,0,0,0,1.32845119707087,0,0.434418072340414,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0.482561763430822,0,1.69630663182921,0.177561725313127,0.328508624055237,0,0.116210378459959,0.120859449591622,0.200506470303285,1.19705285616665,0.459257792658427,0.546273504020151,0.393373244878272,0,0.462092022626489,0,0,0.211103257785751,0,0,1.51141141271498,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0.256450125116389,0,0,0.309123034943167,1.19040304263846,0.742585499285292,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.966782203814463,0.870100163485371,0.767039646744908,0,0.165284915360978,0,0.382838137483752,0.50578890427775,0,0,0,0,0,0,0,0,0.744316738719335,0,0.190630193923825,0,0,0,0,0.359744915166629,0.54907405947211,0.235624804691373,0,0,0,0,0.731140468893853,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0.743212700502875,0.865615277858669,0.924843963529383,2.71024663638998,2.3949524571938,0,1.05836791361941,0.649243880549111,1.68478306868075,1.36940807419915,1.41011906195721,0,0.677167111206413,0.321176150207399,1.81619736471943,0,0.687010689511529,0.921722292925374,0.671028323677248,0.333698283423817,1.17232857241224,0,0,0.540911356951966,0.33307196799782,0,0,0.146508179271894,0.36408156524854,0,0,0,0,0,1.9882952955326,3.51673541026282,0.111308705022906,0.824019371133798,1.26675244876796,0,0.552567831062295,1.0077309914171,0.306806047506464,0.246169610922139,0,0.179736702294654,0.179021174675609,0,0.295930216910801,0,0,0,1.57705766875147,1.99613798001194,0,0,0,0.227586896570999,0,0,1.37897349296586,1.74962768029953,2.60437492399938,0.885741385813839,3.49729672013683,1.52581736317083,0.995213339381022,1.18219047581419,1.09692698576986,0.10893846351899,0,0.384751292518985,0,0,0.179515288819544,0.434589487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| |||
|short_description=p2@CCDC88A | |||
}} |
Latest revision as of 17:25, 17 September 2015
Short description: | p2@CCDC88A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC88A_5end |
Coexpression cluster: | NA |
Association with transcript: | -180bp_to_ENST00000468534_5end |
EntrezGene: | CCDC88A |
HGNC: | 25523 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.92e-08 | 48 |
phagocyte | 3.92e-08 | 48 |
monopoietic cell | 2.80e-07 | 59 |
monocyte | 2.80e-07 | 59 |
monoblast | 2.80e-07 | 59 |
promonocyte | 2.80e-07 | 59 |
macrophage dendritic cell progenitor | 6.90e-07 | 61 |