FFCP PHASE1:Hg19::chr8:26365361..26365372,-: Difference between revisions
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|id=chr8:26365361..26365372,-
|short_description=p5@PNMA2
|description=CAGE_peak_5_at_PNMA2_5end
|association_with_transcript=254bp_to_AF083114_5end
|EntrezGene=10...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10687 | |EntrezGene=10687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9159 | |HGNC=9159 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL42 | |UniProt=Q9UL42 | ||
|association_with_transcript=254bp_to_AF083114_5end | |||
|cluster_id=chr8:26365361..26365372,- | |||
|description=CAGE_peak_5_at_PNMA2_5end | |||
|id=chr8:26365361..26365372,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p5@PNMA2 | |||
}} | }} |
Latest revision as of 17:25, 17 September 2015
Short description: | p5@PNMA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PNMA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 254bp_to_AF083114_5end |
EntrezGene: | PNMA2 |
HGNC: | 9159 |
UniProt: | Q9UL42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 2.74e-50 | 2 |
Ammon's horn | 4.52e-50 | 2 |
lobe parts of cerebral cortex | 4.52e-50 | 2 |
hippocampal formation | 4.52e-50 | 2 |
limbic lobe | 4.52e-50 | 2 |
limbic system | 5.15e-21 | 5 |
regional part of cerebral cortex | 2.02e-18 | 22 |
gyrus | 7.67e-18 | 6 |
cerebral cortex | 1.86e-16 | 25 |
pallium | 1.86e-16 | 25 |
temporal lobe | 1.65e-15 | 6 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |