FFCP PHASE1:Hg19::chr3:197476196..197476224,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9711 | |EntrezGene=9711 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28991 | |HGNC=28991 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000472149_5end | |association_with_transcript=0bp_to_ENST00000472149_5end | ||
|cluster_id=chr3:197476196..197476224,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_6_at_KIAA0226_5end | |description=CAGE_peak_6_at_KIAA0226_5end | ||
|id=chr3:197476196..197476224,- | |id=chr3:197476196..197476224,- | ||
|ontology_enrichment_celltype=CL:0000738!5.51e-09!140;CL:0000624!5.80e-09!6;CL:0000838!1.58e-08!52;CL:0000542!3.12e-08!53;CL:0000051!3.12e-08!53;CL:0000451!2.38e-07!10;CL:0000791!2.97e-07!18;CL:0000789!2.97e-07!18;CL:0002420!2.97e-07!18;CL:0002419!2.97e-07!18;CL:0000790!2.97e-07!18;CL:0000084!4.83e-07!25;CL:0000827!4.83e-07!25;CL:0000453!6.00e-07!5 | |ontology_enrichment_celltype=CL:0000738!5.51e-09!140;CL:0000624!5.80e-09!6;CL:0000838!1.58e-08!52;CL:0000542!3.12e-08!53;CL:0000051!3.12e-08!53;CL:0000451!2.38e-07!10;CL:0000791!2.97e-07!18;CL:0000789!2.97e-07!18;CL:0002420!2.97e-07!18;CL:0002419!2.97e-07!18;CL:0000790!2.97e-07!18;CL:0000084!4.83e-07!25;CL:0000827!4.83e-07!25;CL:0000453!6.00e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000624;4.97e-15;6!CL:0000791;3.90e-14;18!CL:0000789;3.90e-14;18!CL:0002419;3.90e-14;18!CL:0000784;6.23e-12;3!CL:0000451;6.39e-11;10!CL:0000226;8.74e-11;3!CL:0000842;8.74e-11;3!CL:0000623;4.93e-10;3!CL:0000084;1.12e-09;25!CL:0000542;3.25e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.95e-15,6;CL:0000791,4.95e-14,18;CL:0000789,4.95e-14,18;CL:0002420,4.95e-14,18;CL:0002419,4.95e-14,18;CL:0000790,4.95e-14,18;CL:0000838,8.21e-13,52;CL:0000542,1.70e-12,53;CL:0000051,1.70e-12,53;CL:0000784,6.16e-12,3;CL:0000738,4.11e-11,136;CL:0000451,4.68e-11,10;CL:0000226,6.19e-11,3;CL:0000842,6.19e-11,3;CL:0000623,2.11e-10,3;CL:0000825,2.11e-10,3;CL:0000084,1.32e-09,25;CL:0000827,1.32e-09,25;CL:0000037,8.47e-08,168;CL:0000988,4.28e-07,177;CL:0002087,8.56e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;3.90e-14;18!CL:0000051;3.25e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.19e-27!115;UBERON:0001049!5.91e-18!57;UBERON:0005068!5.91e-18!57;UBERON:0006241!5.91e-18!57;UBERON:0007135!5.91e-18!57;UBERON:0002346!1.40e-16!90;UBERON:0002616!8.47e-16!59;UBERON:0002780!9.22e-15!41;UBERON:0001890!9.22e-15!41;UBERON:0006240!9.22e-15!41;UBERON:0003075!2.29e-14!86;UBERON:0007284!2.29e-14!86;UBERON:0003080!3.28e-14!42;UBERON:0000955!1.94e-13!69;UBERON:0006238!1.94e-13!69;UBERON:0001017!1.97e-13!82;UBERON:0005743!5.60e-13!86;UBERON:0001950!1.16e-12!20;UBERON:0002020!3.37e-12!34;UBERON:0003528!3.37e-12!34;UBERON:0001893!7.09e-12!34;UBERON:0000073!3.06e-11!94;UBERON:0001016!3.06e-11!94;UBERON:0002619!4.15e-11!22;UBERON:0002791!4.55e-11!33;UBERON:0001869!8.25e-11!32;UBERON:0000956!3.01e-09!25;UBERON:0000203!3.01e-09!25;UBERON:0000153!3.54e-08!129;UBERON:0007811!3.54e-08!129;UBERON:0000200!4.50e-08!6;UBERON:0003056!5.21e-08!61;UBERON:0000033!6.59e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!3.19e-27!115;UBERON:0001049!5.91e-18!57;UBERON:0005068!5.91e-18!57;UBERON:0006241!5.91e-18!57;UBERON:0007135!5.91e-18!57;UBERON:0002346!1.40e-16!90;UBERON:0002616!8.47e-16!59;UBERON:0002780!9.22e-15!41;UBERON:0001890!9.22e-15!41;UBERON:0006240!9.22e-15!41;UBERON:0003075!2.29e-14!86;UBERON:0007284!2.29e-14!86;UBERON:0003080!3.28e-14!42;UBERON:0000955!1.94e-13!69;UBERON:0006238!1.94e-13!69;UBERON:0001017!1.97e-13!82;UBERON:0005743!5.60e-13!86;UBERON:0001950!1.16e-12!20;UBERON:0002020!3.37e-12!34;UBERON:0003528!3.37e-12!34;UBERON:0001893!7.09e-12!34;UBERON:0000073!3.06e-11!94;UBERON:0001016!3.06e-11!94;UBERON:0002619!4.15e-11!22;UBERON:0002791!4.55e-11!33;UBERON:0001869!8.25e-11!32;UBERON:0000956!3.01e-09!25;UBERON:0000203!3.01e-09!25;UBERON:0000153!3.54e-08!129;UBERON:0007811!3.54e-08!129;UBERON:0000200!4.50e-08!6;UBERON:0003056!5.21e-08!61;UBERON:0000033!6.59e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000200;2.37e-18;6!UBERON:0001950;6.28e-16;20!UBERON:0002619;2.42e-14;22!UBERON:0001869;9.48e-14;32!UBERON:0001893;7.78e-13;34!UBERON:0000956;2.00e-12;25!UBERON:0000203;2.00e-12;25!UBERON:0002791;2.23e-12;32!UBERON:0003528;3.43e-12;34!UBERON:0002020;3.43e-12;34!UBERON:0002780;1.38e-10;41!UBERON:0001890;1.38e-10;41!UBERON:0001870;4.93e-10;3!UBERON:0000073;2.18e-09;53!UBERON:0002616;2.18e-09;53!UBERON:0002771;3.08e-07;2!UBERON:0002702;3.08e-07;2!UBERON:0000955;8.01e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,4.36e-18,6;UBERON:0000073,2.64e-16,53;UBERON:0002616,2.64e-16,53;UBERON:0001950,8.77e-16,20;UBERON:0001869,2.34e-15,32;UBERON:0001049,3.33e-15,56;UBERON:0005068,3.33e-15,56;UBERON:0006241,3.33e-15,56;UBERON:0007135,3.33e-15,56;UBERON:0002780,3.77e-15,41;UBERON:0001890,3.77e-15,41;UBERON:0003080,3.77e-15,41;UBERON:0006240,3.77e-15,41;UBERON:0003528,1.94e-14,34;UBERON:0002020,1.94e-14,34;UBERON:0001893,2.69e-14,34;UBERON:0002619,3.26e-14,22;UBERON:0002791,3.38e-13,32;UBERON:0000956,2.60e-12,25;UBERON:0000203,2.60e-12,25;UBERON:0000955,1.54e-11,68;UBERON:0006238,1.54e-11,68;UBERON:0001870,5.04e-10,3;UBERON:0007023,6.00e-10,114;UBERON:0003056,4.30e-09,61;UBERON:0001017,4.74e-09,81;UBERON:0003075,4.74e-09,82;UBERON:0007284,4.74e-09,82;UBERON:0002346,1.93e-08,86;UBERON:0001016,9.36e-08,89;UBERON:0002771,3.09e-07,2;UBERON:0002702,3.19e-07,2 | |||
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| ||
|short_description=p6@KIAA0226 | |short_description=p6@KIAA0226 | ||
}} | }} |
Latest revision as of 17:21, 17 September 2015
Short description: | p6@KIAA0226 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KIAA0226_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 0bp_to_ENST00000472149_5end |
EntrezGene: | KIAA0226 |
HGNC: | 28991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.95e-15 | 6 |
mature alpha-beta T cell | 4.95e-14 | 18 |
alpha-beta T cell | 4.95e-14 | 18 |
immature T cell | 4.95e-14 | 18 |
mature T cell | 4.95e-14 | 18 |
immature alpha-beta T cell | 4.95e-14 | 18 |
lymphoid lineage restricted progenitor cell | 8.21e-13 | 52 |
lymphocyte | 1.70e-12 | 53 |
common lymphoid progenitor | 1.70e-12 | 53 |
plasmacytoid dendritic cell | 6.16e-12 | 3 |
leukocyte | 4.11e-11 | 136 |
dendritic cell | 4.68e-11 | 10 |
single nucleate cell | 6.19e-11 | 3 |
mononuclear cell | 6.19e-11 | 3 |
natural killer cell | 2.11e-10 | 3 |
pro-NK cell | 2.11e-10 | 3 |
T cell | 1.32e-09 | 25 |
pro-T cell | 1.32e-09 | 25 |
hematopoietic stem cell | 8.47e-08 | 168 |
hematopoietic cell | 4.28e-07 | 177 |
nongranular leukocyte | 8.56e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
gyrus | 4.36e-18 | 6 |
regional part of nervous system | 2.64e-16 | 53 |
regional part of brain | 2.64e-16 | 53 |
neocortex | 8.77e-16 | 20 |
cerebral hemisphere | 2.34e-15 | 32 |
neural tube | 3.33e-15 | 56 |
neural rod | 3.33e-15 | 56 |
future spinal cord | 3.33e-15 | 56 |
neural keel | 3.33e-15 | 56 |
regional part of forebrain | 3.77e-15 | 41 |
forebrain | 3.77e-15 | 41 |
anterior neural tube | 3.77e-15 | 41 |
future forebrain | 3.77e-15 | 41 |
brain grey matter | 1.94e-14 | 34 |
gray matter | 1.94e-14 | 34 |
telencephalon | 2.69e-14 | 34 |
regional part of cerebral cortex | 3.26e-14 | 22 |
regional part of telencephalon | 3.38e-13 | 32 |
cerebral cortex | 2.60e-12 | 25 |
pallium | 2.60e-12 | 25 |
brain | 1.54e-11 | 68 |
future brain | 1.54e-11 | 68 |
frontal cortex | 5.04e-10 | 3 |
adult organism | 6.00e-10 | 114 |
pre-chordal neural plate | 4.30e-09 | 61 |
central nervous system | 4.74e-09 | 81 |
neural plate | 4.74e-09 | 82 |
presumptive neural plate | 4.74e-09 | 82 |
neurectoderm | 1.93e-08 | 86 |
nervous system | 9.36e-08 | 89 |
middle temporal gyrus | 3.09e-07 | 2 |
middle frontal gyrus | 3.19e-07 | 2 |