FFCP PHASE1:Hg19::chr4:39512064..39512077,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:39512064..39512077,-
|short_description=p11@UGDH
|description=CAGE_peak_11_at_UGDH_5end
|association_with_transcript=-68bp_to_AF049126_5end
|EntrezGene=73...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7358 | |EntrezGene=7358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12525 | |HGNC=12525 | ||
|TSSclassifier=strong | |||
|UniProt=O60701 | |UniProt=O60701 | ||
|association_with_transcript=-68bp_to_AF049126_5end | |||
|cluster_id=chr4:39512064..39512077,- | |||
|description=CAGE_peak_11_at_UGDH_5end | |||
|id=chr4:39512064..39512077,- | |||
|ontology_enrichment_celltype=CL:0000055!3.91e-08!180;CL:0000057!9.08e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002570;5.37e-09;8!CL:0000511;1.05e-08;1!CL:0002625;1.05e-08;1!CL:0000216;1.05e-08;1!CL:0002591;1.05e-08;1!CL:0002379;1.05e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,4.89e-09,1;CL:0000511,6.16e-09,1;CL:0002625,6.16e-09,1;CL:0000216,6.16e-09,1;CL:0002570,6.17e-09,8;CL:0002591,1.42e-08,1;CL:0000136,2.91e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;1.05e-08;1!DOID:3565;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,4.89e-09,1;DOID:3565,4.89e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.05e-08;1!UBERON:0001343;1.05e-08;1!UBERON:0004910;1.05e-08;1!UBERON:0004813;1.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.16e-09,1;UBERON:0001343,6.16e-09,1;UBERON:0004910,6.16e-09,1;UBERON:0005154,6.16e-09,1;UBERON:0005295,6.16e-09,1;UBERON:0004813,6.16e-09,1;UBERON:0005297,6.16e-09,1;UBERON:0005294,6.16e-09,1;UBERON:0010141,6.16e-09,1;UBERON:0005891,6.16e-09,1 | |||
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| ||
|short_description=p11@UGDH | |||
}} | }} |
Latest revision as of 17:16, 17 September 2015
Short description: | p11@UGDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_UGDH_5end |
Coexpression cluster: | NA |
Association with transcript: | -68bp_to_AF049126_5end |
EntrezGene: | UGDH |
HGNC: | 12525 |
UniProt: | O60701 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 4.89e-09 | 1 |
androgen binding protein secreting cell | 6.16e-09 | 1 |
seminiferous tubule epithelial cell | 6.16e-09 | 1 |
Sertoli cell | 6.16e-09 | 1 |
mesenchymal stem cell of adipose | 6.17e-09 | 8 |
smooth muscle cell of the pulmonary artery | 1.42e-08 | 1 |
fat cell | 2.91e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.16e-09 | 1 |
seminiferous tubule of testis | 6.16e-09 | 1 |
epithelium of male gonad | 6.16e-09 | 1 |
epithelial cord | 6.16e-09 | 1 |
sex cord | 6.16e-09 | 1 |
seminiferous tubule epithelium | 6.16e-09 | 1 |
testis sex cord | 6.16e-09 | 1 |
genital ridge | 6.16e-09 | 1 |
primitive sex cord of indifferent gonad | 6.16e-09 | 1 |
coelomic epithelium | 6.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.89e-09 | 1 |
meningioma | 4.89e-09 | 1 |