FFCP PHASE1:Hg19::chr2:55277692..55277703,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57142 | |EntrezGene=57142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14085 | |HGNC=14085 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQC3 | |UniProt=Q9NQC3 | ||
|association_with_transcript=-12bp_to_ENST00000317610,ENST00000337526,ENST00000357732_5end | |association_with_transcript=-12bp_to_ENST00000317610,ENST00000337526,ENST00000357732_5end | ||
|cluster_id=chr2:55277692..55277703,- | |||
|description=CAGE_peak_8_at_RTN4_5end | |description=CAGE_peak_8_at_RTN4_5end | ||
|id=chr2:55277692..55277703,- | |id=chr2:55277692..55277703,- | ||
|ontology_enrichment_celltype=CL:0000133!4.17e-10!59;CL:0002319!3.46e-08!25 | |ontology_enrichment_celltype=CL:0000133!4.17e-10!59;CL:0002319!3.46e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.72e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,4.48e-10,59;CL:0002319,3.41e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.02e-07;82 | |||
|ontology_enrichment_disease=DOID:3095!1.20e-09!22;DOID:2994!1.20e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.18e-10;22!DOID:2994;9.18e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.18e-09,22;DOID:2994,1.18e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.88e-35!94;UBERON:0001016!1.88e-35!94;UBERON:0005743!4.04e-33!86;UBERON:0001017!3.62e-31!82;UBERON:0002346!4.23e-26!90;UBERON:0001049!2.51e-25!57;UBERON:0005068!2.51e-25!57;UBERON:0006241!2.51e-25!57;UBERON:0007135!2.51e-25!57;UBERON:0000955!6.86e-25!69;UBERON:0006238!6.86e-25!69;UBERON:0003075!1.02e-24!86;UBERON:0007284!1.02e-24!86;UBERON:0002616!1.59e-23!59;UBERON:0000924!4.20e-20!173;UBERON:0006601!4.20e-20!173;UBERON:0003056!1.26e-19!61;UBERON:0004121!6.90e-19!169;UBERON:0003080!3.25e-18!42;UBERON:0002780!7.55e-18!41;UBERON:0001890!7.55e-18!41;UBERON:0006240!7.55e-18!41;UBERON:0000153!9.71e-16!129;UBERON:0007811!9.71e-16!129;UBERON:0000033!1.36e-15!123;UBERON:0002020!3.18e-15!34;UBERON:0003528!3.18e-15!34;UBERON:0001893!6.77e-15!34;UBERON:0002791!1.92e-14!33;UBERON:0007023!2.10e-14!115;UBERON:0001869!5.34e-14!32;UBERON:0000956!9.79e-11!25;UBERON:0000203!9.79e-11!25;UBERON:0002619!1.76e-09!22;UBERON:0001950!4.67e-09!20;UBERON:0003076!2.57e-08!15;UBERON:0003057!2.57e-08!15;UBERON:0004732!2.63e-07!13;UBERON:0004733!9.04e-07!12;UBERON:0002028!9.04e-07!12;UBERON:0007277!9.04e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.81e-13;53!UBERON:0002616;1.81e-13;53!UBERON:0003528;4.26e-13;34!UBERON:0002020;4.26e-13;34!UBERON:0002780;5.19e-13;41!UBERON:0001890;5.19e-13;41!UBERON:0001893;6.75e-13;34!UBERON:0002791;8.29e-13;32!UBERON:0001869;8.54e-13;32!UBERON:0000955;4.51e-11;68!UBERON:0001016;5.23e-11;83!UBERON:0000956;1.30e-10;25!UBERON:0000203;1.30e-10;25!UBERON:0001017;2.71e-10;75!UBERON:0002619;2.36e-09;22!UBERON:0001950;5.78e-09;20!UBERON:0004732;2.21e-07;13!UBERON:0004733;7.63e-07;12!UBERON:0002028;7.63e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.21e-33,89;UBERON:0001017,8.47e-31,81;UBERON:0002346,1.20e-25,86;UBERON:0001049,5.69e-25,56;UBERON:0005068,5.69e-25,56;UBERON:0006241,5.69e-25,56;UBERON:0007135,5.69e-25,56;UBERON:0000955,1.58e-24,68;UBERON:0006238,1.58e-24,68;UBERON:0003075,2.85e-24,82;UBERON:0007284,2.85e-24,82;UBERON:0000073,2.42e-23,53;UBERON:0002616,2.42e-23,53;UBERON:0003056,8.41e-20,61;UBERON:0004121,7.55e-19,171;UBERON:0000924,7.55e-19,171;UBERON:0006601,7.55e-19,171;UBERON:0002780,7.27e-18,41;UBERON:0001890,7.27e-18,41;UBERON:0003080,7.27e-18,41;UBERON:0006240,7.27e-18,41;UBERON:0011216,2.47e-16,223;UBERON:0010371,2.51e-15,104;UBERON:0003528,3.08e-15,34;UBERON:0002020,3.08e-15,34;UBERON:0001893,6.56e-15,34;UBERON:0007023,4.90e-14,114;UBERON:0002791,4.93e-14,32;UBERON:0001869,5.19e-14,32;UBERON:0010314,1.24e-13,132;UBERON:0000956,9.58e-11,25;UBERON:0000203,9.58e-11,25;UBERON:0002619,1.73e-09,22;UBERON:0001950,4.59e-09,20;UBERON:0003076,2.53e-08,15;UBERON:0003057,2.53e-08,15;UBERON:0004732,2.59e-07,13;UBERON:0004733,8.93e-07,12;UBERON:0002028,8.93e-07,12;UBERON:0007277,8.93e-07,12 | |||
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| ||
|short_description=p8@RTN4 | |short_description=p8@RTN4 | ||
}} | }} |
Latest revision as of 17:08, 17 September 2015
Short description: | p8@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000317610, ENST00000337526, ENST00000357732_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | Q9NQC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 4.48e-10 | 59 |
neural cell | 3.41e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.18e-09 | 22 |
germ cell cancer | 1.18e-09 | 22 |