FFCP PHASE1:Hg19::chr13:50018402..50018469,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83852 | |EntrezGene=83852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20263 | |HGNC=20263 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T68 | |UniProt=Q96T68 | ||
|association_with_transcript=0bp_to_ENST00000354234,NM_031915,uc001vcy.3,uc001vcz.2,uc010adg.2,uc010adh.2_5end | |association_with_transcript=0bp_to_ENST00000354234,NM_031915,uc001vcy.3,uc001vcz.2,uc010adg.2,uc010adh.2_5end | ||
|cluster_id=chr13:50018402..50018469,+ | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_1_at_SETDB2_5end | |description=CAGE_peak_1_at_SETDB2_5end | ||
|id=chr13:50018402..50018469,+ | |id=chr13:50018402..50018469,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.15e-55!172;CL:0000566!2.15e-55!172;CL:0002032!4.81e-53!165;CL:0000837!4.81e-53!165;CL:0000988!1.75e-51!182;CL:0000738!3.55e-47!140;CL:0002031!2.38e-43!124;CL:0002087!4.30e-42!119;CL:0000763!1.28e-38!112;CL:0000049!1.28e-38!112;CL:0000766!3.66e-31!76;CL:0000557!4.94e-31!71;CL:0000839!5.85e-30!70;CL:0002009!3.35e-29!65;CL:0002194!8.97e-29!63;CL:0000576!8.97e-29!63;CL:0000040!8.97e-29!63;CL:0000559!8.97e-29!63;CL:0002057!2.73e-25!42;CL:0000860!8.10e-23!45;CL:0000219!8.17e-23!390;CL:0000134!7.40e-22!358;CL:0002320!3.35e-20!365;CL:0000838!9.79e-13!52;CL:0000542!1.86e-12!53;CL:0000051!1.86e-12!53;CL:0000034!2.64e-10!444;CL:0000048!6.49e-10!430;CL:0000723!2.72e-09!436;CL:0000945!4.20e-09!24;CL:0000826!4.20e-09!24;CL:0000236!1.70e-07!14;CL:0002393!5.95e-07!9;CL:0002397!5.95e-07!9 | |ontology_enrichment_celltype=CL:0000037!2.15e-55!172;CL:0000566!2.15e-55!172;CL:0002032!4.81e-53!165;CL:0000837!4.81e-53!165;CL:0000988!1.75e-51!182;CL:0000738!3.55e-47!140;CL:0002031!2.38e-43!124;CL:0002087!4.30e-42!119;CL:0000763!1.28e-38!112;CL:0000049!1.28e-38!112;CL:0000766!3.66e-31!76;CL:0000557!4.94e-31!71;CL:0000839!5.85e-30!70;CL:0002009!3.35e-29!65;CL:0002194!8.97e-29!63;CL:0000576!8.97e-29!63;CL:0000040!8.97e-29!63;CL:0000559!8.97e-29!63;CL:0002057!2.73e-25!42;CL:0000860!8.10e-23!45;CL:0000219!8.17e-23!390;CL:0000134!7.40e-22!358;CL:0002320!3.35e-20!365;CL:0000838!9.79e-13!52;CL:0000542!1.86e-12!53;CL:0000051!1.86e-12!53;CL:0000034!2.64e-10!444;CL:0000048!6.49e-10!430;CL:0000723!2.72e-09!436;CL:0000945!4.20e-09!24;CL:0000826!4.20e-09!24;CL:0000236!1.70e-07!14;CL:0002393!5.95e-07!9;CL:0002397!5.95e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000576;7.32e-19;48!CL:0000473;1.40e-18;39!CL:0000234;1.40e-18;39!CL:0000860;2.05e-18;33!CL:0002057;2.05e-18;33!CL:0000766;5.51e-15;69!CL:0002087;8.73e-13;104!CL:0000763;1.32e-12;100!CL:0000738;8.48e-11;136!CL:0000988;1.70e-09;177!CL:0000945;4.33e-09;24!CL:0000542;6.40e-08;53!CL:0000236;2.40e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.77e-58,168;CL:0002032,4.02e-56,161;CL:0000837,4.02e-56,161;CL:0000988,2.44e-55,177;CL:0000738,3.11e-50,136;CL:0002031,1.74e-46,120;CL:0002087,2.96e-45,115;CL:0000763,7.71e-42,108;CL:0000049,7.71e-42,108;CL:0000557,9.87e-35,67;CL:0000766,1.10e-34,72;CL:0000839,1.34e-33,66;CL:0002009,5.56e-33,61;CL:0002194,1.33e-32,59;CL:0000576,1.33e-32,59;CL:0000040,1.33e-32,59;CL:0000559,1.33e-32,59;CL:0000473,4.24e-29,48;CL:0000234,4.24e-29,48;CL:0000860,2.25e-25,42;CL:0002057,2.25e-25,42;CL:0000219,9.78e-24,386;CL:0000134,7.21e-23,354;CL:0002320,3.83e-21,361;CL:0000838,8.94e-13,52;CL:0000542,1.70e-12,53;CL:0000051,1.70e-12,53;CL:0000034,8.65e-11,441;CL:0000048,2.16e-10,427;CL:0000723,9.48e-10,433;CL:0000945,3.95e-09,24;CL:0000826,3.95e-09,24;CL:0000236,1.62e-07,14;CL:0002393,5.70e-07,9;CL:0002397,5.70e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.48e-19;42!CL:0000049;4.51e-12;108!CL:0000051;6.40e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!2.51e-08!51;DOID:0060083!2.51e-08!51;DOID:8692!1.30e-07!31;DOID:1240!5.37e-07!39 | |ontology_enrichment_disease=DOID:2531!2.51e-08!51;DOID:0060083!2.51e-08!51;DOID:8692!1.30e-07!31;DOID:1240!5.37e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.21e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.03e-08,51;DOID:0060083,2.03e-08,51;DOID:8692,1.02e-07,31;DOID:1240,4.37e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.10e-30!102;UBERON:0003061!7.10e-30!102;UBERON:0002371!2.34e-26!80;UBERON:0002193!7.61e-26!112;UBERON:0001474!2.84e-24!86;UBERON:0004765!1.07e-20!101;UBERON:0001434!1.07e-20!101;UBERON:0002405!1.78e-18!115;UBERON:0002384!1.80e-18!375 | |ontology_enrichment_uberon=UBERON:0002390!7.10e-30!102;UBERON:0003061!7.10e-30!102;UBERON:0002371!2.34e-26!80;UBERON:0002193!7.61e-26!112;UBERON:0001474!2.84e-24!86;UBERON:0004765!1.07e-20!101;UBERON:0001434!1.07e-20!101;UBERON:0002405!1.78e-18!115;UBERON:0002384!1.80e-18!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.75e-33,98;UBERON:0003061,9.75e-33,98;UBERON:0002371,1.82e-29,76;UBERON:0002193,4.01e-28,108;UBERON:0001474,5.33e-27,82;UBERON:0002405,3.54e-26,93;UBERON:0004765,4.42e-22,90;UBERON:0001434,2.22e-21,100;UBERON:0002384,2.19e-19,371 | |||
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| ||
|short_description=p1@SETDB2 | |short_description=p1@SETDB2 | ||
}} | }} |
Latest revision as of 16:57, 17 September 2015
Short description: | p1@SETDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SETDB2_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 0bp_to_ENST00000354234, NM_031915, uc001vcy.3, uc001vcz.2, uc010adg.2, uc010adh.2_5end |
EntrezGene: | SETDB2 |
HGNC: | 20263 |
UniProt: | Q96T68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.75e-33 | 98 |
blood island | 9.75e-33 | 98 |
bone marrow | 1.82e-29 | 76 |
hemolymphoid system | 4.01e-28 | 108 |
bone element | 5.33e-27 | 82 |
immune system | 3.54e-26 | 93 |
skeletal element | 4.42e-22 | 90 |
skeletal system | 2.22e-21 | 100 |
connective tissue | 2.19e-19 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.03e-08 | 51 |
immune system cancer | 2.03e-08 | 51 |
myeloid leukemia | 1.02e-07 | 31 |
leukemia | 4.37e-07 | 39 |