FFCP PHASE1:Hg19::chr11:33758004..33758013,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:33758004..33758013,- to FFCP PHASE1:Hg19::chr11:33758004..33758013,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=966 | |EntrezGene=966 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1689 | |HGNC=1689 | ||
|TSSclassifier=strong | |||
|UniProt=P13987,Q6FHM9 | |UniProt=P13987,Q6FHM9 | ||
|association_with_transcript=11bp_to_NM_000611,NM_203329,NM_203330,NM_203331,uc001mut.3,uc001muu.3,uc001muv.3,uc001mux.3,uc009yka.2_5end | |||
|cluster_id=chr11:33758004..33758013,- | |||
|description=CAGE_peak_3_at_CD59_5end | |||
|id=chr11:33758004..33758013,- | |||
|ontology_enrichment_celltype=CL:0000222!3.35e-09!119;CL:0000115!1.78e-07!35;CL:0002078!2.42e-07!44;CL:0000359!9.42e-07!32 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.57e-09,121;CL:0000115,1.80e-07,36;CL:0002078,2.30e-07,45;CL:0000359,8.11e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!5.52e-15!286;UBERON:0004111!6.08e-12!241;UBERON:0000119!8.78e-12!312;UBERON:0000483!1.12e-11!309;UBERON:0004872!3.91e-11!84;UBERON:0000055!5.06e-11!69;UBERON:0000481!2.19e-10!347;UBERON:0000025!3.87e-10!194;UBERON:0000468!1.35e-09!659;UBERON:0001981!1.49e-09!60;UBERON:0007500!1.49e-09!60;UBERON:0004537!1.49e-09!60;UBERON:0006965!1.49e-09!60;UBERON:0000480!1.53e-09!626;UBERON:0000467!1.79e-09!625;UBERON:0002049!1.89e-09!79;UBERON:0007798!1.89e-09!79;UBERON:0000914!4.91e-09!83;UBERON:0002329!4.91e-09!83;UBERON:0003077!4.91e-09!83;UBERON:0003059!4.91e-09!83;UBERON:0007282!4.91e-09!83;UBERON:0009618!4.91e-09!83;UBERON:0007285!4.91e-09!83;UBERON:0000475!3.88e-08!365;UBERON:0002050!6.19e-08!605;UBERON:0005423!6.19e-08!605;UBERON:0000923!7.24e-08!604;UBERON:0005291!7.24e-08!604;UBERON:0006598!7.24e-08!604;UBERON:0002532!7.24e-08!604;UBERON:0001637!8.47e-08!42;UBERON:0003509!8.47e-08!42;UBERON:0004572!8.47e-08!42;UBERON:0000064!9.90e-08!219;UBERON:0000922!1.51e-07!612;UBERON:0001049!1.73e-07!57;UBERON:0005068!1.73e-07!57;UBERON:0006241!1.73e-07!57;UBERON:0007135!1.73e-07!57;UBERON:0007023!2.00e-07!115;UBERON:0004290!2.82e-07!70;UBERON:0000486!3.00e-07!82;UBERON:0002616!3.01e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.01e-11,240;UBERON:0004872,2.62e-11,83;UBERON:0000055,3.25e-11,68;UBERON:0000119,7.87e-11,309;UBERON:0000483,9.98e-11,306;UBERON:0010314,4.29e-10,132;UBERON:0000025,4.62e-10,192;UBERON:0007500,1.28e-09,59;UBERON:0001981,1.28e-09,59;UBERON:0004537,1.28e-09,59;UBERON:0006965,1.28e-09,59;UBERON:0002049,1.45e-09,78;UBERON:0007798,1.45e-09,78;UBERON:0001637,7.07e-08,42;UBERON:0003509,7.07e-08,42;UBERON:0004572,7.07e-08,42;UBERON:0003077,1.07e-07,72;UBERON:0007285,1.07e-07,72;UBERON:0001049,1.53e-07,56;UBERON:0005068,1.53e-07,56;UBERON:0006241,1.53e-07,56;UBERON:0007135,1.53e-07,56;UBERON:0007503,1.56e-07,78;UBERON:0000486,1.61e-07,83;UBERON:0002329,1.61e-07,71;UBERON:0003059,1.61e-07,71;UBERON:0007282,1.61e-07,71;UBERON:0004290,1.61e-07,71;UBERON:0009618,1.61e-07,71;UBERON:0007524,1.91e-07,73;UBERON:0007023,2.43e-07,114;UBERON:0000073,3.21e-07,53;UBERON:0002616,3.21e-07,53 | |||
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| ||
|short_description=p3@CD59 | |||
}} | }} |
Latest revision as of 16:57, 17 September 2015
Short description: | p3@CD59 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD59_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_NM_000611, NM_203329, NM_203330, NM_203331, uc001mut.3, uc001muu.3, uc001muv.3, uc001mux.3, uc009yka.2_5end |
EntrezGene: | CD59 |
HGNC: | 1689 |
UniProt: | P13987Q6FHM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.57e-09 | 121 |
endothelial cell | 1.80e-07 | 36 |
meso-epithelial cell | 2.30e-07 | 45 |
vascular associated smooth muscle cell | 8.11e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.01e-11 | 240 |
splanchnic layer of lateral plate mesoderm | 2.62e-11 | 83 |
vessel | 3.25e-11 | 68 |
cell layer | 7.87e-11 | 309 |
epithelium | 9.98e-11 | 306 |
structure with developmental contribution from neural crest | 4.29e-10 | 132 |
tube | 4.62e-10 | 192 |
epithelial tube open at both ends | 1.28e-09 | 59 |
blood vessel | 1.28e-09 | 59 |
blood vasculature | 1.28e-09 | 59 |
vascular cord | 1.28e-09 | 59 |
vasculature | 1.45e-09 | 78 |
vascular system | 1.45e-09 | 78 |
artery | 7.07e-08 | 42 |
arterial blood vessel | 7.07e-08 | 42 |
arterial system | 7.07e-08 | 42 |
paraxial mesoderm | 1.07e-07 | 72 |
presumptive paraxial mesoderm | 1.07e-07 | 72 |
neural tube | 1.53e-07 | 56 |
neural rod | 1.53e-07 | 56 |
future spinal cord | 1.53e-07 | 56 |
neural keel | 1.53e-07 | 56 |
epithelial vesicle | 1.56e-07 | 78 |
multilaminar epithelium | 1.61e-07 | 83 |
somite | 1.61e-07 | 71 |
presomitic mesoderm | 1.61e-07 | 71 |
presumptive segmental plate | 1.61e-07 | 71 |
dermomyotome | 1.61e-07 | 71 |
trunk paraxial mesoderm | 1.61e-07 | 71 |
dense mesenchyme tissue | 1.91e-07 | 73 |
adult organism | 2.43e-07 | 114 |
regional part of nervous system | 3.21e-07 | 53 |
regional part of brain | 3.21e-07 | 53 |