FFCP PHASE1:Hg19::chr10:25011894..25011936,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:25011894..25011936,-
|short_description=p9@ARHGAP21
|description=CAGE_peak_9_at_ARHGAP21_5end
|association_with_transcript=-205bp_to_ENST00000463892_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57584 | |EntrezGene=57584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23725 | |HGNC=23725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-205bp_to_ENST00000463892_5end | |||
|cluster_id=chr10:25011894..25011936,- | |||
|description=CAGE_peak_9_at_ARHGAP21_5end | |||
|id=chr10:25011894..25011936,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.84e-12!82;UBERON:0000073!2.14e-11!94;UBERON:0001016!2.14e-11!94;UBERON:0001049!3.32e-11!57;UBERON:0005068!3.32e-11!57;UBERON:0006241!3.32e-11!57;UBERON:0007135!3.32e-11!57;UBERON:0001893!6.59e-11!34;UBERON:0005743!7.00e-11!86;UBERON:0002791!1.42e-10!33;UBERON:0002020!1.81e-10!34;UBERON:0003528!1.81e-10!34;UBERON:0001869!6.28e-10!32;UBERON:0000955!9.77e-10!69;UBERON:0006238!9.77e-10!69;UBERON:0002780!1.40e-09!41;UBERON:0001890!1.40e-09!41;UBERON:0006240!1.40e-09!41;UBERON:0002616!1.41e-09!59;UBERON:0003075!2.24e-09!86;UBERON:0007284!2.24e-09!86;UBERON:0002346!5.01e-09!90;UBERON:0003080!5.76e-09!42;UBERON:0000956!3.76e-08!25;UBERON:0000203!3.76e-08!25;UBERON:0004121!1.53e-07!169;UBERON:0000924!2.08e-07!173;UBERON:0006601!2.08e-07!173;UBERON:0002619!9.77e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.15e-11;53!UBERON:0002616;7.15e-11;53!UBERON:0000956;1.39e-10;25!UBERON:0000203;1.39e-10;25!UBERON:0002780;7.11e-10;41!UBERON:0001890;7.11e-10;41!UBERON:0002791;2.80e-09;32!UBERON:0001893;6.63e-09;34!UBERON:0003528;1.05e-08;34!UBERON:0002020;1.05e-08;34!UBERON:0002619;3.25e-08;22!UBERON:0001869;4.64e-08;32!UBERON:0001017;8.00e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.75e-15,89;UBERON:0001017,7.09e-15,81;UBERON:0001049,4.39e-14,56;UBERON:0005068,4.39e-14,56;UBERON:0006241,4.39e-14,56;UBERON:0007135,4.39e-14,56;UBERON:0000073,1.10e-13,53;UBERON:0002616,1.10e-13,53;UBERON:0002780,4.32e-12,41;UBERON:0001890,4.32e-12,41;UBERON:0003080,4.32e-12,41;UBERON:0006240,4.32e-12,41;UBERON:0001893,8.91e-12,34;UBERON:0000956,4.30e-11,25;UBERON:0000203,4.30e-11,25;UBERON:0002791,4.71e-11,32;UBERON:0000955,1.71e-10,68;UBERON:0006238,1.71e-10,68;UBERON:0003528,3.19e-10,34;UBERON:0002020,3.19e-10,34;UBERON:0003075,7.97e-10,82;UBERON:0007284,7.97e-10,82;UBERON:0001869,1.64e-09,32;UBERON:0002346,4.24e-09,86;UBERON:0002619,1.11e-08,22;UBERON:0003056,7.32e-08,61;UBERON:0004121,9.07e-07,171;UBERON:0000924,9.07e-07,171;UBERON:0006601,9.07e-07,171 | |||
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|phase1_expression=0,0.856402095563933,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0.994192127183747,0,0.602694528023977,0,0,0.738726348460727,0,0.940364164434263,2.28988789704845,2.46373965131192,0.627713197974014,1.22261449196722,0.903106483949403,1.10195093839151,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,1.10799081706375,0.601633342410425,0.434021741431704,1.11957737119962,0.32389366601898,0.257575567634187,0.726991193897824,0,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0.224723484445085,0,0.320929027076094,0,0.659702600373432,0.199463657621632,0,0,0,1.24564449799115,0.251248665256743,0,0,0,0,0,0,0,0.628975936525128,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0.382273228125229,0,1.12101712596307,0.263384084775077,0.393419540227666,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.589211814949674,0,0.270803863765016,0,0.130059347559878,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.759059076058509,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0.670700859703636,0.12786256184353,0,1.00267582127178,0.724232594804119,0.795285947051099,0,0.756278537312543,0.443458794925128,0.351339142772504,0.458426764241994,0,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0,0,0.838998872419812,0.550236083880135,0.417989933073621,1.55050055501597,0.35576626268671,3.3472061276467,0,2.28081631715554,0.976248230192678,0.367663080345869,0.81014194788176,0.714397826272638,0.44905874525234,0.450445921933289,0,0.949265659568129,1.09921046358244,0,0,0,0,0.12663051166458,0.529636723252875,1.14734648299525,0.354668382198357,0.560677600142307,0,0,1.55605517699883,0.538842688278752,0.653847612453835,0,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.587172493218824,0.323745888736263,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,1.23633464639278,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0.438977620880838,0.919463387397059,0.901428353439581,0.226864366320042,0.538168907066586,0,0,0.600182192168805,0.721367704669072,1.28820270022815,0,0.168776332241266,0.0974370051611986,1.7670364197088,0,0.646584227275248,1.06502877754984,0.302256294682921,0,0.57978255948989,0.272746120590835,0,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0.482022059766964,0.110293972732394,0.435758888184812,0.237270619111097,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0,1.47008711385542,0,0,0,0.441463099414651,1.10689594688802,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.579652024875384,0,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,11.3312544716067,0.792435906119034,1.03664057770386,0.576479813667846,0.75745460055828,0,0,0,0,0.308482478109971,0,0.571652865261156,0.224262168690721,0.43596006883328,0,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0,0,1.62786481617433,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0,0,0.394061520403854,0,0.128343036279748,3.81141936333695,6.50699269288109,0,1.84267891867784,2.55175500661265,0,0,0.414415513436035,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.521301686808497,0.391602314925481,0,0.206768026122887,0.862856803274467,0.640365346820666,0.303127571446259,0,0,0.248107807818777,1.07423381301644,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0.362578348774867,0,0,0.34444334449382,0.728364672026868,0.131124414959424,0.451199612907412,0.15403067420883,0.784349769176855,0,0.316654886678627,2.27466768141793,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,0,0.676695028044854,0,0.15350367472613,0.413509717453592,0.537101224341368,0.145016693914229,0.0852266274161009,0.534192213880424,0.165284915360978,0.576570202095319,1.27612712494584,0,0.464845549297286,1.25924938732256,0,0.616067160352178,0,0,0,0.286249773483982,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0,0.54907405947211,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,0,0.409499734223957,0.424216295861138,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,1.41904425628239,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,1.29694662238543,0.540031437238115,1.5862503525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| ||
|short_description=p9@ARHGAP21 | |||
}} | }} |
Latest revision as of 16:56, 17 September 2015
Short description: | p9@ARHGAP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ARHGAP21_5end |
Coexpression cluster: | NA |
Association with transcript: | -205bp_to_ENST00000463892_5end |
EntrezGene: | ARHGAP21 |
HGNC: | 23725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.75e-15 | 89 |
central nervous system | 7.09e-15 | 81 |
neural tube | 4.39e-14 | 56 |
neural rod | 4.39e-14 | 56 |
future spinal cord | 4.39e-14 | 56 |
neural keel | 4.39e-14 | 56 |
regional part of nervous system | 1.10e-13 | 53 |
regional part of brain | 1.10e-13 | 53 |
regional part of forebrain | 4.32e-12 | 41 |
forebrain | 4.32e-12 | 41 |
anterior neural tube | 4.32e-12 | 41 |
future forebrain | 4.32e-12 | 41 |
telencephalon | 8.91e-12 | 34 |
cerebral cortex | 4.30e-11 | 25 |
pallium | 4.30e-11 | 25 |
regional part of telencephalon | 4.71e-11 | 32 |
brain | 1.71e-10 | 68 |
future brain | 1.71e-10 | 68 |
brain grey matter | 3.19e-10 | 34 |
gray matter | 3.19e-10 | 34 |
neural plate | 7.97e-10 | 82 |
presumptive neural plate | 7.97e-10 | 82 |
cerebral hemisphere | 1.64e-09 | 32 |
neurectoderm | 4.24e-09 | 86 |
regional part of cerebral cortex | 1.11e-08 | 22 |
pre-chordal neural plate | 7.32e-08 | 61 |
ectoderm-derived structure | 9.07e-07 | 171 |
ectoderm | 9.07e-07 | 171 |
presumptive ectoderm | 9.07e-07 | 171 |