FFCP PHASE1:Hg19::chr15:43477484..43477495,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23582 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1587 | |||
|TSSclassifier=strong | |||
|UniProt=O95273 | |||
|association_with_transcript=18bp_to_NM_012142,NR_027513,NR_027514,uc001zqu.2,uc001zqv.2,uc001zqw.2,uc001zqx.2,uc010bdb.2,uc010bdc.2,uc010bdd.2,uc010udl.1_5end | |||
|cluster_id=chr15:43477484..43477495,+ | |||
|description=CAGE_peak_7_at_CCNDBP1_5end | |||
|id=chr15:43477484..43477495,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.50e-13!94;UBERON:0001016!1.50e-13!94;UBERON:0005743!8.21e-12!86;UBERON:0001049!6.36e-11!57;UBERON:0005068!6.36e-11!57;UBERON:0006241!6.36e-11!57;UBERON:0007135!6.36e-11!57;UBERON:0002616!7.37e-11!59;UBERON:0001017!9.43e-11!82;UBERON:0007023!1.43e-10!115;UBERON:0000955!4.23e-10!69;UBERON:0006238!4.23e-10!69;UBERON:0002346!4.45e-10!90;UBERON:0000153!2.20e-09!129;UBERON:0007811!2.20e-09!129;UBERON:0003075!6.56e-09!86;UBERON:0007284!6.56e-09!86;UBERON:0000033!1.73e-08!123;UBERON:0000924!2.00e-08!173;UBERON:0006601!2.00e-08!173;UBERON:0001869!2.36e-08!32;UBERON:0001893!5.63e-08!34;UBERON:0002020!1.49e-07!34;UBERON:0003528!1.49e-07!34;UBERON:0004121!1.59e-07!169;UBERON:0002791!2.01e-07!33;UBERON:0000956!3.89e-07!25;UBERON:0000203!3.89e-07!25;UBERON:0002780!7.34e-07!41;UBERON:0001890!7.34e-07!41;UBERON:0006240!7.34e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.35e-08;34!UBERON:0001869;2.40e-08;32!UBERON:0001950;5.20e-08;20!UBERON:0011159;1.89e-07;5!UBERON:0002791;2.75e-07;32!UBERON:0002619;3.14e-07;22!UBERON:0003528;7.40e-07;34!UBERON:0002020;7.40e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.00e-11,81;UBERON:0001016,1.39e-10,89;UBERON:0001869,4.54e-10,32;UBERON:0007023,5.93e-10,114;UBERON:0000073,2.13e-09,53;UBERON:0002616,2.13e-09,53;UBERON:0001893,2.21e-09,34;UBERON:0000955,4.64e-09,68;UBERON:0006238,4.64e-09,68;UBERON:0001049,9.32e-09,56;UBERON:0005068,9.32e-09,56;UBERON:0006241,9.32e-09,56;UBERON:0007135,9.32e-09,56;UBERON:0005253,1.25e-08,2;UBERON:0001950,2.55e-08,20;UBERON:0002791,4.25e-08,32;UBERON:0002346,1.06e-07,86;UBERON:0011159,1.18e-07,5;UBERON:0003528,1.53e-07,34;UBERON:0002020,1.53e-07,34;UBERON:0002619,1.65e-07,22;UBERON:0002780,1.70e-07,41;UBERON:0001890,1.70e-07,41;UBERON:0003080,1.70e-07,41;UBERON:0006240,1.70e-07,41;UBERON:0003075,4.67e-07,82;UBERON:0007284,4.67e-07,82 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.37129905888014,0,0.672325146451775,0.602694528023977,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0.572471974262113,0.547497700291537,0.376627918784408,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0,0,0,0.30120591877825,0,0,0,1.46800219667424,0,0,0.217010870715852,0,0.32389366601898,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.382273228125229,1.32171328579026,0,0.263384084775077,0.393419540227666,0.393010762749165,0.205601498999509,0,1.30368906653436,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0.593146252648242,0.267540828089713,0,0,0.766440987203842,1.71813722741315,0.253019692019503,0.95569624297229,0,0,0.301150238155546,0.895906278080929,0,0,0,0.201606743224732,0,0,0,0,0.383587685530591,0,0.50133791063589,0.869079113764942,0,0.486634870302636,0.661743720148475,0.443458794925128,0.790513071238134,0.523916301990851,0,0,0,0,0,0.715471872916026,1.14398982156026,2.22874500797739,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.17859945656816,0.44905874525234,0.337834441449967,1.53316637465883,0.949265659568129,0,0,0,0,0,0,0.264818361626438,0,0,0,1.06748995729705,0.74000264525148,0,0.67355336034844,0.490385709340376,0.605429710579726,0,0.234321431833797,0,0,0.597794722207204,0.117434498643765,0,0.140450806702248,0.204154171254893,0.61417158655884,0.103325781175765,0,0.494533858557114,0,0,0,0.375355559615893,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0,0.206105058476878,0.257640540045629,0,0.337552664482532,0.487185025805993,0.252433774244115,0.368199594569197,0.161646056818812,0.355009592516614,0.201504196455281,0.339121184620975,0.386521706326594,0.545492241181669,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,1.03993478527958,0,0.579652024875384,0.234817388471643,0.577465791044295,0,0.190254152234598,0,0,0,0.234004265139238,0,1.87467667973554,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0,0.264145302039678,0,0,0,0.063497894292169,1.14596527667483,0,0,0.308482478109971,0,0.571652865261156,0.224262168690721,0.43596006883328,0.36669142910475,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0.479249710983165,0,0,0,0.410952645100767,0.358121926479791,0.112085143993527,0,0,0.256686072559497,1.27047312111232,0,0.773288812777695,1.00509759200609,0,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,0.415941723061614,0.178428988797162,0,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0,0.434418072340414,0.587403472388222,1.02943027143257,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0.248107807818777,0,0.561320188866147,0.384417447767103,0,0.321707842287215,1.48418066444991,0.154209693802656,0.355123450626254,0.410635780069046,0.519254429183621,0.232420756919918,0,0.40101294060657,0,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,1.56869953835371,0,0.211103257785751,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0.656029291399411,0.650756789328606,0,0.27470839445503,0.082509499920588,0,0,0,0.870036464629098,0.308097234229289,0.15350367472613,0,0.214840489736547,0.870100163485371,0.170453254832202,0.445160178233687,0.165284915360978,0.192190067365106,0,0.30347334256665,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.18532421910392,1.00187420719394,0.744316738719335,1.2655176988749,0.190630193923825,0.255897791311334,0,0.636406495851874,0.78494864019923,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,0,1.31178950409327,0.202910376962704,0,0.281695602532241,0.286822704408103,0.392996164052485,0.35667105148125,0.354761064070598,0.422215270595328,0.658589785919804,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0,0,1.52234282769651,1.52927441428475,0,0,0.411362273086194,1.29694662238543,1.08006287447623,0.79312517629427,0.427296284509893,0,0,0,0.144269212976445,0.284567373393656,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0.293016358543788,1.21360521749513,0.111443384277478,0,0,0.2969646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| |||
|short_description=p7@CCNDBP1 | |||
}} |
Latest revision as of 16:52, 17 September 2015
Short description: | p7@CCNDBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CCNDBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_NM_012142, NR_027513, NR_027514, uc001zqu.2, uc001zqv.2, uc001zqw.2, uc001zqx.2, uc010bdb.2, uc010bdc.2, uc010bdd.2, uc010udl.1_5end |
EntrezGene: | CCNDBP1 |
HGNC: | 1587 |
UniProt: | O95273 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.00e-11 | 81 |
nervous system | 1.39e-10 | 89 |
cerebral hemisphere | 4.54e-10 | 32 |
adult organism | 5.93e-10 | 114 |
regional part of nervous system | 2.13e-09 | 53 |
regional part of brain | 2.13e-09 | 53 |
telencephalon | 2.21e-09 | 34 |
brain | 4.64e-09 | 68 |
future brain | 4.64e-09 | 68 |
neural tube | 9.32e-09 | 56 |
neural rod | 9.32e-09 | 56 |
future spinal cord | 9.32e-09 | 56 |
neural keel | 9.32e-09 | 56 |
head mesenchyme | 1.25e-08 | 2 |
neocortex | 2.55e-08 | 20 |
regional part of telencephalon | 4.25e-08 | 32 |
neurectoderm | 1.06e-07 | 86 |
primary subdivision of cranial skeletal system | 1.18e-07 | 5 |
brain grey matter | 1.53e-07 | 34 |
gray matter | 1.53e-07 | 34 |
regional part of cerebral cortex | 1.65e-07 | 22 |
regional part of forebrain | 1.70e-07 | 41 |
forebrain | 1.70e-07 | 41 |
anterior neural tube | 1.70e-07 | 41 |
future forebrain | 1.70e-07 | 41 |
neural plate | 4.67e-07 | 82 |
presumptive neural plate | 4.67e-07 | 82 |