FFCP PHASE1:Hg19::chr12:1703711..1703733,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:1703711..1703733,-
|short_description=p1@FBXL14
|description=CAGE_peak_1_at_FBXL14_5end
|association_with_transcript=-380bp_to_ENST00000339235,NM_152441,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=144699 | |EntrezGene=144699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28624 | |HGNC=28624 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N1E6 | |UniProt=Q8N1E6 | ||
|association_with_transcript=-380bp_to_ENST00000339235,NM_152441,uc001qjh.2_5end | |||
|cluster_id=chr12:1703711..1703733,- | |||
|description=CAGE_peak_1_at_FBXL14_5end | |||
|id=chr12:1703711..1703733,- | |||
|ontology_enrichment_celltype=CL:0000738!1.97e-14!140;CL:0002087!4.53e-13!119;CL:0002031!1.31e-11!124;CL:0000838!6.66e-11!52;CL:0000542!1.09e-10!53;CL:0000051!1.09e-10!53;CL:0000037!2.51e-10!172;CL:0000566!2.51e-10!172;CL:0000791!6.25e-10!18;CL:0000789!6.25e-10!18;CL:0002420!6.25e-10!18;CL:0002419!6.25e-10!18;CL:0000790!6.25e-10!18;CL:0000988!4.13e-09!182;CL:0002032!8.83e-09!165;CL:0000837!8.83e-09!165;CL:0000084!4.01e-08!25;CL:0000827!4.01e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.91e-11;18!CL:0000789;7.91e-11;18!CL:0002419;7.91e-11;18!CL:0000084;3.77e-09;25!CL:0000860;1.87e-07;33!CL:0002057;1.87e-07;33!CL:0000542;2.66e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.73e-16,136;CL:0002087,1.38e-14,115;CL:0002031,3.57e-13,120;CL:0000838,1.90e-11,52;CL:0000037,2.28e-11,168;CL:0000542,3.21e-11,53;CL:0000051,3.21e-11,53;CL:0000791,1.26e-10,18;CL:0000789,1.26e-10,18;CL:0002420,1.26e-10,18;CL:0002419,1.26e-10,18;CL:0000790,1.26e-10,18;CL:0000988,2.55e-10,177;CL:0002032,1.16e-09,161;CL:0000837,1.16e-09,161;CL:0000084,4.68e-09,25;CL:0000827,4.68e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000790;7.91e-11;18!CL:0000051;2.66e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.31e-10!115;UBERON:0001049!6.42e-09!57;UBERON:0005068!6.42e-09!57;UBERON:0006241!6.42e-09!57;UBERON:0007135!6.42e-09!57;UBERON:0002020!9.06e-09!34;UBERON:0003528!9.06e-09!34;UBERON:0001893!1.13e-08!34;UBERON:0002791!2.12e-08!33;UBERON:0000073!4.34e-08!94;UBERON:0001016!4.34e-08!94;UBERON:0002780!4.49e-08!41;UBERON:0001890!4.49e-08!41;UBERON:0006240!4.49e-08!41;UBERON:0001869!7.53e-08!32;UBERON:0003080!1.07e-07!42;UBERON:0002390!1.47e-07!102;UBERON:0003061!1.47e-07!102;UBERON:0001017!1.59e-07!82;UBERON:0005743!2.77e-07!86;UBERON:0003075!4.32e-07!86;UBERON:0007284!4.32e-07!86;UBERON:0002619!9.89e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.25e-07;34!UBERON:0002020;5.25e-07;34!UBERON:0001893;5.51e-07;34!UBERON:0002791;6.82e-07;32!UBERON:0001869;8.41e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.11e-09,114;UBERON:0001049,1.97e-09,56;UBERON:0005068,1.97e-09,56;UBERON:0006241,1.97e-09,56;UBERON:0007135,1.97e-09,56;UBERON:0003528,8.29e-09,34;UBERON:0002020,8.29e-09,34;UBERON:0001893,1.04e-08,34;UBERON:0001016,1.28e-08,89;UBERON:0000073,1.55e-08,53;UBERON:0002616,1.55e-08,53;UBERON:0002780,3.81e-08,41;UBERON:0001890,3.81e-08,41;UBERON:0003080,3.81e-08,41;UBERON:0006240,3.81e-08,41;UBERON:0002390,3.99e-08,98;UBERON:0003061,3.99e-08,98;UBERON:0002791,5.78e-08,32;UBERON:0001017,6.00e-08,81;UBERON:0001869,7.79e-08,32;UBERON:0003075,1.49e-07,82;UBERON:0007284,1.49e-07,82;UBERON:0002619,3.65e-07,22;UBERON:0002346,4.93e-07,86;UBERON:0002193,8.65e-07,108 | |||
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| ||
|short_description=p1@FBXL14 | |||
}} | }} |
Latest revision as of 16:46, 17 September 2015
Short description: | p1@FBXL14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FBXL14_5end |
Coexpression cluster: | NA |
Association with transcript: | -380bp_to_ENST00000339235, NM_152441, uc001qjh.2_5end |
EntrezGene: | FBXL14 |
HGNC: | 28624 |
UniProt: | Q8N1E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.73e-16 | 136 |
nongranular leukocyte | 1.38e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.57e-13 | 120 |
lymphoid lineage restricted progenitor cell | 1.90e-11 | 52 |
hematopoietic stem cell | 2.28e-11 | 168 |
lymphocyte | 3.21e-11 | 53 |
common lymphoid progenitor | 3.21e-11 | 53 |
mature alpha-beta T cell | 1.26e-10 | 18 |
alpha-beta T cell | 1.26e-10 | 18 |
immature T cell | 1.26e-10 | 18 |
mature T cell | 1.26e-10 | 18 |
immature alpha-beta T cell | 1.26e-10 | 18 |
hematopoietic cell | 2.55e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.16e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-09 | 161 |
T cell | 4.68e-09 | 25 |
pro-T cell | 4.68e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.11e-09 | 114 |
neural tube | 1.97e-09 | 56 |
neural rod | 1.97e-09 | 56 |
future spinal cord | 1.97e-09 | 56 |
neural keel | 1.97e-09 | 56 |
brain grey matter | 8.29e-09 | 34 |
gray matter | 8.29e-09 | 34 |
telencephalon | 1.04e-08 | 34 |
nervous system | 1.28e-08 | 89 |
regional part of nervous system | 1.55e-08 | 53 |
regional part of brain | 1.55e-08 | 53 |
regional part of forebrain | 3.81e-08 | 41 |
forebrain | 3.81e-08 | 41 |
anterior neural tube | 3.81e-08 | 41 |
future forebrain | 3.81e-08 | 41 |
hematopoietic system | 3.99e-08 | 98 |
blood island | 3.99e-08 | 98 |
regional part of telencephalon | 5.78e-08 | 32 |
central nervous system | 6.00e-08 | 81 |
cerebral hemisphere | 7.79e-08 | 32 |
neural plate | 1.49e-07 | 82 |
presumptive neural plate | 1.49e-07 | 82 |
regional part of cerebral cortex | 3.65e-07 | 22 |
neurectoderm | 4.93e-07 | 86 |
hemolymphoid system | 8.65e-07 | 108 |