FFCP PHASE1:Hg19::chr17:74722673..74722718,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:74722673..74722718,-
|short_description=p2@JMJD6
|description=CAGE_peak_2_at_JMJD6_5end
|association_with_transcript=-1bp_to_ENST00000397625_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23210 | |EntrezGene=23210 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19355 | |HGNC=19355 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000397625_5end | |||
|cluster_id=chr17:74722673..74722718,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_JMJD6_5end | |||
|id=chr17:74722673..74722718,- | |||
|ontology_enrichment_celltype=CL:0002057!8.71e-25!42;CL:0000860!1.55e-23!45;CL:0000738!6.05e-19!140;CL:0000766!3.26e-17!76;CL:0000557!4.80e-14!71;CL:0000839!2.67e-13!70;CL:0002031!3.25e-13!124;CL:0002009!5.02e-13!65;CL:0002087!3.83e-12!119;CL:0002194!4.12e-12!63;CL:0000576!4.12e-12!63;CL:0000040!4.12e-12!63;CL:0000559!4.12e-12!63;CL:0000037!8.74e-12!172;CL:0000566!8.74e-12!172;CL:0000988!4.58e-10!182;CL:0002032!6.91e-10!165;CL:0000837!6.91e-10!165;CL:0000134!1.31e-09!358;CL:0000763!2.57e-09!112;CL:0000049!2.57e-09!112;CL:0000048!9.86e-09!430;CL:0002320!1.35e-08!365;CL:0000723!1.66e-08!436;CL:0000034!1.12e-07!444;CL:0000219!1.63e-07!390;CL:0000094!6.26e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.15e-19;33!CL:0002057;7.15e-19;33!CL:0000473;2.40e-12;39!CL:0000234;2.40e-12;39!CL:0000576;5.21e-12;48!CL:0000766;6.36e-10;69!CL:0000094;4.57e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.67e-25,42;CL:0002057,8.67e-25,42;CL:0000473,5.66e-20,48;CL:0000234,5.66e-20,48;CL:0000738,4.74e-19,136;CL:0000766,1.35e-17,72;CL:0000557,2.37e-14,67;CL:0000839,1.38e-13,66;CL:0002009,2.43e-13,61;CL:0002031,2.85e-13,120;CL:0002194,2.10e-12,59;CL:0000576,2.10e-12,59;CL:0000040,2.10e-12,59;CL:0000559,2.10e-12,59;CL:0002087,3.41e-12,115;CL:0000037,9.17e-12,168;CL:0000988,5.24e-10,177;CL:0002032,7.40e-10,161;CL:0000837,7.40e-10,161;CL:0000134,1.39e-09,354;CL:0000763,2.42e-09,108;CL:0000049,2.42e-09,108;CL:0000048,7.91e-09,427;CL:0000723,1.34e-08,433;CL:0002320,1.47e-08,361;CL:0000034,9.22e-08,441;CL:0000219,1.77e-07,386;CL:0000094,6.26e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.03e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.82e-13!80;UBERON:0001474!4.10e-12!86;UBERON:0002390!1.26e-11!102;UBERON:0003061!1.26e-11!102;UBERON:0002193!1.07e-09!112;UBERON:0004765!1.46e-09!101;UBERON:0001434!1.46e-09!101;UBERON:0002405!6.62e-09!115;UBERON:0002384!1.26e-07!375;UBERON:0002204!3.87e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.44e-13,76;UBERON:0001474,2.64e-12,82;UBERON:0002390,9.97e-12,98;UBERON:0003061,9.97e-12,98;UBERON:0002405,2.38e-10,93;UBERON:0002193,1.02e-09,108;UBERON:0004765,1.94e-09,90;UBERON:0001434,1.08e-08,100;UBERON:0003081,1.03e-07,203;UBERON:0002384,1.35e-07,371 | |||
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| ||
|short_description=p2@JMJD6 | |||
}} | }} |
Latest revision as of 16:44, 17 September 2015
Short description: | p2@JMJD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JMJD6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -1bp_to_ENST00000397625_5end |
EntrezGene: | JMJD6 |
HGNC: | 19355 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.67e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.67e-25 | 42 |
defensive cell | 5.66e-20 | 48 |
phagocyte | 5.66e-20 | 48 |
leukocyte | 4.74e-19 | 136 |
myeloid leukocyte | 1.35e-17 | 72 |
granulocyte monocyte progenitor cell | 2.37e-14 | 67 |
myeloid lineage restricted progenitor cell | 1.38e-13 | 66 |
macrophage dendritic cell progenitor | 2.43e-13 | 61 |
hematopoietic lineage restricted progenitor cell | 2.85e-13 | 120 |
monopoietic cell | 2.10e-12 | 59 |
monocyte | 2.10e-12 | 59 |
monoblast | 2.10e-12 | 59 |
promonocyte | 2.10e-12 | 59 |
nongranular leukocyte | 3.41e-12 | 115 |
hematopoietic stem cell | 9.17e-12 | 168 |
hematopoietic cell | 5.24e-10 | 177 |
hematopoietic oligopotent progenitor cell | 7.40e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.40e-10 | 161 |
mesenchymal cell | 1.39e-09 | 354 |
myeloid cell | 2.42e-09 | 108 |
common myeloid progenitor | 2.42e-09 | 108 |
multi fate stem cell | 7.91e-09 | 427 |
somatic stem cell | 1.34e-08 | 433 |
connective tissue cell | 1.47e-08 | 361 |
stem cell | 9.22e-08 | 441 |
motile cell | 1.77e-07 | 386 |
granulocyte | 6.26e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.44e-13 | 76 |
bone element | 2.64e-12 | 82 |
hematopoietic system | 9.97e-12 | 98 |
blood island | 9.97e-12 | 98 |
immune system | 2.38e-10 | 93 |
hemolymphoid system | 1.02e-09 | 108 |
skeletal element | 1.94e-09 | 90 |
skeletal system | 1.08e-08 | 100 |
lateral plate mesoderm | 1.03e-07 | 203 |
connective tissue | 1.35e-07 | 371 |