FFCP PHASE1:Hg19::chr7:20371023..20371030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3696 | |EntrezGene=3696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6163 | |HGNC=6163 | ||
|TSSclassifier=strong | |||
|UniProt=P26012 | |UniProt=P26012 | ||
|association_with_transcript=277bp_to_ENST00000222573_5end | |association_with_transcript=277bp_to_ENST00000222573_5end | ||
|cluster_id=chr7:20371023..20371030,+ | |||
|coexpression_cluster_id=C4672 | |coexpression_cluster_id=C4672 | ||
|description=CAGE_peak_25_at_ITGB8_5end | |description=CAGE_peak_25_at_ITGB8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.70e-36;2!CL:0000860;5.56e-13;33!CL:0002057;5.56e-13;33!CL:0000473;1.10e-08;39!CL:0000234;1.10e-08;39 | |ontology_enrichment_celltype_v019=CL:0000047;1.70e-36;2!CL:0000860;5.56e-13;33!CL:0002057;5.56e-13;33!CL:0000473;1.10e-08;39!CL:0000234;1.10e-08;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.49e-11,42;CL:0002057,6.49e-11,42;CL:0000047,6.63e-10,8;CL:0000473,1.48e-09,48;CL:0000234,1.48e-09,48;CL:0002194,1.19e-07,59;CL:0000576,1.19e-07,59;CL:0000040,1.19e-07,59;CL:0000559,1.19e-07,59;CL:0002009,2.11e-07,61;CL:0000839,7.54e-07,66;CL:0000557,9.51e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;6.36e-09;42!UBERON:0003056;2.88e-07;3 | |ontology_enrichment_development_v019=CL:0002057;6.36e-09;42!UBERON:0003056;2.88e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;1.89e-10;2 | |ontology_enrichment_disease_v019=DOID:4468;1.89e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,2.07e-10,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;2.88e-07;3!UBERON:0005290;2.88e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001896;2.88e-07;3!UBERON:0005290;2.88e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.63e-07,3;UBERON:0005290,2.63e-07,3;UBERON:0010096,2.63e-07,3 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.85870796139317,0.410623275218653,0.251085279189606,0.305653622991805,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0.689491361473237,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,3.77272010217159,2.26954089876456,1.86846674698672,0,0,0,3.02699751316684,1.10483290796269,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,2.25095607382472,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0.283550194484773,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0.144119953416961,0,0.253991577168676,0,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,1.30139853857622,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0.114814448164607,0,0,0.451199612907412,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0,0.424216295861138,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.278847488557207,0.230850775511391,0.569710279235006,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,2.12202650606892,0,0,0,0.176915129006678,0,0.593042257361244,0.123563938946503,0.313265848516366,0.134802265961354,0,0,0.182454789215666,0.586993856796269,0,0.394584402849391,0,0.61214552326098,0.063186579628488,0,0.103688191397247,0,0,0,0,0.569219092059585,0,0.173559738335131,0,0,0,0.343972064943233,0.0967563312890851,0.219267951258557,0,0,0.0882561266915003,0.225980740780532,0,0,0,0.195551382734803,0.400794101257669,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0,0.160753148465019,0,0,0.899895566206002,0,0.182248669974074,0,0.157611414598396,0.262272940674991,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0,1.72022758707021,0.221858103073705,0.0620964029413835,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.429642228169954,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,0,0,0.471878893390961,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0.135075169236789,0,0,0.0634158101939068,0,0,0.496211178389294,0.527613733078862,0,0,0,0,0,0.532214220975833,0,0,0.271878931907327,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,1.00067161847319,0,0.348724276104376,0.173858272302579,0.801711364730253,0,0.3414369541879,0,0,0,0.0852134047591577,0,0.9164274741762,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0.233939463462106,0.397901550322736,0,0.22589216407792,0,0.603851374266694,0,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0.297046400327086,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.430018749454354,0,0.135982980381829,0,0,0.371995018166751,0,0,0,0,0,0,0.26721740526556,0,0,0.227336094654718,0,0,0.103432995861895,0,0.476128862927481,0.0645889098360061,0,0.224263725161227,0,0,0.217716747896961,0,0.0673520530145875,0,0,0.325613074443898,0,0,0.269475606319761,0,0,0,0,0,0 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| ||
|short_description=p25@ITGB8 | |short_description=p25@ITGB8 | ||
}} | }} |
Latest revision as of 16:42, 17 September 2015
Short description: | p25@ITGB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_ITGB8_5end |
Coexpression cluster: | C4672_Fibroblast_CD14_clear_retina_immature_CD34_endometrial |
Association with transcript: | 277bp_to_ENST00000222573_5end |
EntrezGene: | ITGB8 |
HGNC: | 6163 |
UniProt: | P26012 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.49e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.49e-11 | 42 |
neuronal stem cell | 6.63e-10 | 8 |
defensive cell | 1.48e-09 | 48 |
phagocyte | 1.48e-09 | 48 |
monopoietic cell | 1.19e-07 | 59 |
monocyte | 1.19e-07 | 59 |
monoblast | 1.19e-07 | 59 |
promonocyte | 1.19e-07 | 59 |
macrophage dendritic cell progenitor | 2.11e-07 | 61 |
myeloid lineage restricted progenitor cell | 7.54e-07 | 66 |
granulocyte monocyte progenitor cell | 9.51e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.63e-07 | 3 |
myelencephalon | 2.63e-07 | 3 |
future myelencephalon | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.07e-10 | 2 |