FFCP PHASE1:Hg19::chr7:20371003..20371017,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:20371003..20371017,+
|short_description=p13@ITGB8
|description=CAGE_peak_13_at_ITGB8_5end
|association_with_transcript=257bp_to_ENST00000222573_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3696 | |EntrezGene=3696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6163 | |HGNC=6163 | ||
|TSSclassifier=strong | |||
|UniProt=P26012 | |UniProt=P26012 | ||
|association_with_transcript=257bp_to_ENST00000222573_5end | |||
|cluster_id=chr7:20371003..20371017,+ | |||
|coexpression_cluster_id=C4672 | |||
|description=CAGE_peak_13_at_ITGB8_5end | |||
|id=chr7:20371003..20371017,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.60e-12;33!CL:0002057;6.60e-12;33!CL:1000306;1.04e-08;4!CL:0002547;1.04e-08;4!CL:0000473;1.91e-08;39!CL:0000234;1.91e-08;39!CL:0000576;1.64e-07;48!CL:0002595;8.26e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.30e-15,42;CL:0002057,1.30e-15,42;CL:0000473,3.36e-13,48;CL:0000234,3.36e-13,48;CL:0000557,5.72e-11,67;CL:0002009,7.08e-11,61;CL:0002194,7.62e-10,59;CL:0000576,7.62e-10,59;CL:0000040,7.62e-10,59;CL:0000559,7.62e-10,59;CL:0000839,9.32e-10,66;CL:1000306,8.56e-09,4;CL:0002547,8.56e-09,4;CL:0000766,1.19e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!2.86e-08!625;UBERON:0000480!3.74e-08!626;UBERON:0000062!9.23e-08!511;UBERON:0002050!1.26e-07!605;UBERON:0005423!1.26e-07!605;UBERON:0000922!1.39e-07!612;UBERON:0000923!2.09e-07!604;UBERON:0005291!2.09e-07!604;UBERON:0006598!2.09e-07!604;UBERON:0002532!2.09e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.04e-08;4!UBERON:0000415;1.04e-08;4!UBERON:0007240;1.04e-08;4!UBERON:0005742;1.04e-08;4!UBERON:0005734;1.04e-08;4!UBERON:0004664;1.04e-08;4!UBERON:0004663;1.04e-08;4!UBERON:0003834;8.26e-07;5!UBERON:0001533;8.26e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.25e-09,76;UBERON:0002405,8.25e-09,93;UBERON:0000415,8.56e-09,4;UBERON:0007240,8.56e-09,4;UBERON:0005742,8.56e-09,4;UBERON:0005734,8.56e-09,4;UBERON:0004664,8.56e-09,4;UBERON:0004663,8.56e-09,4;UBERON:0001474,2.91e-08,82;UBERON:0003081,6.37e-08,203;UBERON:0002193,6.50e-08,108;UBERON:0002390,3.28e-07,98;UBERON:0003061,3.28e-07,98;UBERON:0004765,3.37e-07,90;UBERON:0002204,9.68e-07,167 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.246242116153576,0.204000691244253,0.940364164434263,1.71741592278634,0.684372125364421,1.00434111675842,0.534893840235659,1.55991119954897,1.25937250101887,0,0.383829398097213,0,0,0.30120591877825,0,0,0,0,2.76997704265939,2.20598892217156,1.73608696572681,0,0,0.257575567634187,0,0,0,0.929716147622738,0,0,0.28769239232215,0.256160706529101,0,8.96338769915208,1.93645405075148,1.35426486594342,0.376484679085209,0,0,5.50951006267625,1.28371610830437,3.19668562899521,0,0,0,13.930043454172,7.37600792098482,4.9825779919646,0,0,0,11.502590550034,5.52416453981347,8.22802207346299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,2.24203425192614,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.443458794925128,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64619665163954,27.5411096091495,5.44989579422746,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0.505754070234305,0.482022059766964,0.110293972732394,0,0.474541238222193,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0.658501712451753,0,0.502644862058154,0.462942225792648,0,0,0,0.695582429850461,0,1.01056513432752,0.462985512576611,1.71228737011138,0,0,0,0.468008530278475,0,0,0.503946384596579,0.850650583454319,0.895585227028483,0.581267877027924,0.766765358330422,1.97065295158377,0.088048434013226,0.207328115540772,0,0,0.380987365753014,0.381988425558278,0,0,0.925447434329912,1.50171528921959,1.71495859578347,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,3.19913571782583,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0.76228387266739,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0.460385919864187,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0.131124414959424,0.902399225814824,2.38747545023686,0,1.46139224653261,1.37217117560738,0,0,0,0,0,0,1.01950509218015,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0,0,0,3.21367859688319,0,0,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0,0.464845549297286,0,0,0.616067160352178,0,0,0.55597265731176,0.429374660225974,0,0,0,0,0,0,0,0,0,0.353437207037059,0.404364963146632,0,0,0,4.14312932373184,0,0,0.282810863907425,1.13008116620243,1.10273068709225,0.66343897524122,2.19225442626881,0,1.31178950409327,2.63783490051515,0,0,0,0,1.426684205925,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.667852230137435,0,0,0.398495976502139,0.552567831062295,0.503865495708552,0.715880777515084,0.492339221844278,0,0.269605053441981,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0,0,0.278847488557207,0.307801034015188,1.48124672601102,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,12.0792278037769,0,0,0,0.265372693510018,0,1.48260564340311,0.370691816839509,0.626531697032732,0.202203398942031,0.802577647298789,0.234264445725339,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,3.69992409838731,0,0.867798691675654,0.195984794828755,0.174118413160805,0.34945333648406,0.343972064943233,0.290268993867255,0.219267951258557,0.492692742319255,0.0969890164884194,0.441280633457501,0.451961481561065,0,0.19871461170299,0.189932387867636,0,0.240476460754601,0.640358984218058,0.39961921916426,0.288180834308212,0,0,0,0,0.235694034616795,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0.275078873194468,0,2.69968669861801,0,0.182248669974074,0.335434687599266,0.945668487590378,0.314727528809989,0,0.179287339332845,0.575745591958336,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0,0,0,0.500763722825999,1.14681839138014,0.554645257684261,0.18628920882415,0,0.624902039810533,0,2.85465333544967,0,0,0,0,0,0,0.189403005275089,0.25156790175257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| ||
|short_description=p13@ITGB8 | |||
}} | }} |
Latest revision as of 16:42, 17 September 2015
Short description: | p13@ITGB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ITGB8_5end |
Coexpression cluster: | C4672_Fibroblast_CD14_clear_retina_immature_CD34_endometrial |
Association with transcript: | 257bp_to_ENST00000222573_5end |
EntrezGene: | ITGB8 |
HGNC: | 6163 |
UniProt: | P26012 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.30e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.30e-15 | 42 |
defensive cell | 3.36e-13 | 48 |
phagocyte | 3.36e-13 | 48 |
granulocyte monocyte progenitor cell | 5.72e-11 | 67 |
macrophage dendritic cell progenitor | 7.08e-11 | 61 |
monopoietic cell | 7.62e-10 | 59 |
monocyte | 7.62e-10 | 59 |
monoblast | 7.62e-10 | 59 |
promonocyte | 7.62e-10 | 59 |
myeloid lineage restricted progenitor cell | 9.32e-10 | 66 |
fibroblast of tunica adventitia of artery | 8.56e-09 | 4 |
fibroblast of the aortic adventitia | 8.56e-09 | 4 |
myeloid leukocyte | 1.19e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.25e-09 | 76 |
immune system | 8.25e-09 | 93 |
artery wall | 8.56e-09 | 4 |
tunica adventitia of artery | 8.56e-09 | 4 |
adventitia | 8.56e-09 | 4 |
tunica adventitia of blood vessel | 8.56e-09 | 4 |
aorta tunica adventitia | 8.56e-09 | 4 |
aorta wall | 8.56e-09 | 4 |
bone element | 2.91e-08 | 82 |
lateral plate mesoderm | 6.37e-08 | 203 |
hemolymphoid system | 6.50e-08 | 108 |
hematopoietic system | 3.28e-07 | 98 |
blood island | 3.28e-07 | 98 |
skeletal element | 3.37e-07 | 90 |
musculoskeletal system | 9.68e-07 | 167 |