FFCP PHASE1:Hg19::chr2:55214659..55214692,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:55214659..55214692,-
|short_description=p12@RTN4
|description=CAGE_peak_12_at_RTN4_5end
|association_with_transcript=76bp_to_ENST00000486085_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57142 | |EntrezGene=57142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14085 | |HGNC=14085 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=76bp_to_ENST00000486085_5end | |||
|cluster_id=chr2:55214659..55214692,- | |||
|description=CAGE_peak_12_at_RTN4_5end | |||
|id=chr2:55214659..55214692,- | |||
|ontology_enrichment_celltype=CL:0000055!2.99e-10!180;CL:0000222!2.16e-08!119;CL:0000057!4.23e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.29e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.50e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.39e-10!83;UBERON:0002329!8.39e-10!83;UBERON:0003077!8.39e-10!83;UBERON:0003059!8.39e-10!83;UBERON:0007282!8.39e-10!83;UBERON:0009618!8.39e-10!83;UBERON:0007285!8.39e-10!83;UBERON:0000468!3.27e-08!659;UBERON:0004290!7.05e-08!70;UBERON:0000486!7.33e-08!82;UBERON:0005256!9.00e-08!143;UBERON:0000467!2.77e-07!625;UBERON:0000480!4.61e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,7.07e-09,73;UBERON:0003077,2.44e-08,72;UBERON:0007285,2.44e-08,72;UBERON:0000926,3.05e-08,315;UBERON:0004120,3.05e-08,315;UBERON:0006603,3.05e-08,315;UBERON:0002329,4.56e-08,71;UBERON:0003059,4.56e-08,71;UBERON:0007282,4.56e-08,71;UBERON:0004290,4.56e-08,71;UBERON:0009618,4.56e-08,71;UBERON:0007503,5.73e-08,78;UBERON:0000486,6.58e-08,83 | |||
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| ||
|short_description=p12@RTN4 | |||
}} | }} |
Latest revision as of 16:35, 17 September 2015
Short description: | p12@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_ENST00000486085_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.29e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 7.07e-09 | 73 |
paraxial mesoderm | 2.44e-08 | 72 |
presumptive paraxial mesoderm | 2.44e-08 | 72 |
mesoderm | 3.05e-08 | 315 |
mesoderm-derived structure | 3.05e-08 | 315 |
presumptive mesoderm | 3.05e-08 | 315 |
somite | 4.56e-08 | 71 |
presomitic mesoderm | 4.56e-08 | 71 |
presumptive segmental plate | 4.56e-08 | 71 |
dermomyotome | 4.56e-08 | 71 |
trunk paraxial mesoderm | 4.56e-08 | 71 |
epithelial vesicle | 5.73e-08 | 78 |
multilaminar epithelium | 6.58e-08 | 83 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.50e-07 | 14 |