FFCP PHASE1:Hg19::chr10:24544308..24544313,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56243 | |EntrezGene=56243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25428 | |HGNC=25428 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1Q3 | |UniProt=F5H1Q3 | ||
|association_with_transcript=51bp_to_ENST00000430453,uc010qda.1_5end | |association_with_transcript=51bp_to_ENST00000430453,uc010qda.1_5end | ||
|cluster_id=chr10:24544308..24544313,+ | |||
|coexpression_cluster_id=C3008 | |coexpression_cluster_id=C3008 | ||
|description=CAGE_peak_18_at_KIAA1217_5end | |description=CAGE_peak_18_at_KIAA1217_5end | ||
|id=chr10:24544308..24544313,+ | |id=chr10:24544308..24544313,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.23e-26!254;CL:0002076!1.88e-16!43;CL:0000223!9.63e-12!59;CL:0000039!3.66e-11!7;CL:0000586!3.66e-11!7;CL:0002368!2.42e-10!13;CL:0002251!3.62e-09!21;CL:0000622!3.27e-08!5;CL:0002159!3.48e-08!13;CL:0000150!2.39e-07!9 | |ontology_enrichment_celltype=CL:0000066!3.23e-26!254;CL:0002076!1.88e-16!43;CL:0000223!9.63e-12!59;CL:0000039!3.66e-11!7;CL:0000586!3.66e-11!7;CL:0002368!2.42e-10!13;CL:0002251!3.62e-09!21;CL:0000622!3.27e-08!5;CL:0002159!3.48e-08!13;CL:0000150!2.39e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.47e-21;7!CL:0000586;3.47e-21;7!CL:0002577;1.45e-13;3!CL:0002076;2.39e-13;42!CL:0002621;5.19e-13;3!CL:0000349;6.63e-13;19!CL:0002368;5.65e-11;13!CL:0002536;9.10e-10;2!CL:0002251;2.16e-09;20!CL:0000575;5.54e-09;2!CL:0000622;1.14e-08;5!CL:0000154;2.77e-07;6!CL:0002159;4.56e-07;14!CL:0002623;5.05e-07;3!CL:0002605;9.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.70e-21,7;CL:0000586,3.70e-21,7;CL:0002076,3.50e-16,42;CL:0002577,2.13e-13,3;CL:0000349,6.35e-13,19;CL:0002621,7.73e-13,3;CL:0000066,4.89e-12,253;CL:0002368,5.94e-11,13;CL:0000223,7.31e-11,58;CL:0002536,7.05e-10,2;CL:0000575,2.05e-09,2;CL:0002251,2.17e-09,20;CL:0000622,1.01e-08,5;CL:0000154,2.50e-07,6;CL:0002159,2.71e-07,14;CL:0002623,5.29e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.03e-07!14 | |ontology_enrichment_disease=DOID:1749!3.03e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.77e-14!72;UBERON:0005631!5.91e-14!14;UBERON:0000158!5.91e-14!14;UBERON:0004119!2.69e-13!169;UBERON:0000925!2.69e-13!169;UBERON:0006595!2.69e-13!169;UBERON:0000464!8.39e-12!104;UBERON:0000161!2.76e-11!35;UBERON:0000166!7.14e-11!21;UBERON:0003124!1.47e-10!7;UBERON:0000065!8.54e-10!53;UBERON:0001444!1.11e-09!48;UBERON:0000466!6.54e-09!126;UBERON:0000064!1.58e-08!219;UBERON:0000165!1.60e-08!28;UBERON:0000930!1.60e-08!28;UBERON:0004923!2.66e-08!57;UBERON:0000077!4.88e-08!130;UBERON:0001007!7.98e-08!155;UBERON:0001555!7.98e-08!155;UBERON:0007026!7.98e-08!155;UBERON:0005178!9.55e-08!34;UBERON:0002224!9.55e-08!34;UBERON:0005181!2.13e-07!35;UBERON:0003100!2.85e-07!41;UBERON:0000072!6.69e-07!46;UBERON:0001987!7.23e-07!4;UBERON:0004340!7.23e-07!4;UBERON:0003729!8.43e-07!5;UBERON:0000478!9.96e-07!24 | |ontology_enrichment_uberon=UBERON:0001004!1.77e-14!72;UBERON:0005631!5.91e-14!14;UBERON:0000158!5.91e-14!14;UBERON:0004119!2.69e-13!169;UBERON:0000925!2.69e-13!169;UBERON:0006595!2.69e-13!169;UBERON:0000464!8.39e-12!104;UBERON:0000161!2.76e-11!35;UBERON:0000166!7.14e-11!21;UBERON:0003124!1.47e-10!7;UBERON:0000065!8.54e-10!53;UBERON:0001444!1.11e-09!48;UBERON:0000466!6.54e-09!126;UBERON:0000064!1.58e-08!219;UBERON:0000165!1.60e-08!28;UBERON:0000930!1.60e-08!28;UBERON:0004923!2.66e-08!57;UBERON:0000077!4.88e-08!130;UBERON:0001007!7.98e-08!155;UBERON:0001555!7.98e-08!155;UBERON:0007026!7.98e-08!155;UBERON:0005178!9.55e-08!34;UBERON:0002224!9.55e-08!34;UBERON:0005181!2.13e-07!35;UBERON:0003100!2.85e-07!41;UBERON:0000072!6.69e-07!46;UBERON:0001987!7.23e-07!4;UBERON:0004340!7.23e-07!4;UBERON:0003729!8.43e-07!5;UBERON:0000478!9.96e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.19e-13;3!UBERON:0001987;2.76e-10;4!UBERON:0005631;3.41e-10;10!UBERON:0000158;3.41e-10;10!UBERON:0000478;6.07e-10;24!UBERON:0000165;2.16e-08;28!UBERON:0000161;1.85e-07;19!UBERON:0000166;1.85e-07;19!UBERON:0000344;9.58e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.19e-18,14;UBERON:0000158,5.19e-18,14;UBERON:0003124,8.15e-15,7;UBERON:0001949,7.73e-13,3;UBERON:0001987,3.67e-10,4;UBERON:0004340,3.67e-10,4;UBERON:0000478,5.87e-10,24;UBERON:0001004,2.78e-09,74;UBERON:0004923,3.84e-09,66;UBERON:0000166,1.59e-08,22;UBERON:0000033,2.97e-08,56;UBERON:0004119,3.51e-08,160;UBERON:0000925,3.51e-08,160;UBERON:0006595,3.51e-08,160;UBERON:0000165,4.34e-08,29;UBERON:0000930,4.34e-08,29;UBERON:0000153,3.18e-07,62;UBERON:0007811,3.18e-07,62;UBERON:0000344,9.66e-07,20 | |||
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| ||
|short_description=p18@KIAA1217 | |short_description=p18@KIAA1217 | ||
}} | }} |
Latest revision as of 16:25, 17 September 2015
Short description: | p18@KIAA1217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_KIAA1217_5end |
Coexpression cluster: | C3008_choriocarcinoma_Small_testicular_Amniotic_oral_pancreatic_medulloblastoma |
Association with transcript: | 51bp_to_ENST00000430453, uc010qda.1_5end |
EntrezGene: | KIAA1217 |
HGNC: | 25428 |
UniProt: | F5H1Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.70e-21 | 7 |
germ cell | 3.70e-21 | 7 |
endo-epithelial cell | 3.50e-16 | 42 |
placental epithelial cell | 2.13e-13 | 3 |
extraembryonic cell | 6.35e-13 | 19 |
gingival epithelial cell | 7.73e-13 | 3 |
epithelial cell | 4.89e-12 | 253 |
respiratory epithelial cell | 5.94e-11 | 13 |
endodermal cell | 7.31e-11 | 58 |
amniotic epithelial cell | 7.05e-10 | 2 |
corneal epithelial cell | 2.05e-09 | 2 |
epithelial cell of alimentary canal | 2.17e-09 | 20 |
acinar cell | 1.01e-08 | 5 |
protein secreting cell | 2.50e-07 | 6 |
general ecto-epithelial cell | 2.71e-07 | 14 |
acinar cell of salivary gland | 5.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.19e-18 | 14 |
membranous layer | 5.19e-18 | 14 |
chorion | 8.15e-15 | 7 |
gingival epithelium | 7.73e-13 | 3 |
placenta | 3.67e-10 | 4 |
allantois | 3.67e-10 | 4 |
extraembryonic structure | 5.87e-10 | 24 |
respiratory system | 2.78e-09 | 74 |
organ component layer | 3.84e-09 | 66 |
oral opening | 1.59e-08 | 22 |
head | 2.97e-08 | 56 |
endoderm-derived structure | 3.51e-08 | 160 |
endoderm | 3.51e-08 | 160 |
presumptive endoderm | 3.51e-08 | 160 |
mouth | 4.34e-08 | 29 |
stomodeum | 4.34e-08 | 29 |
anterior region of body | 3.18e-07 | 62 |
craniocervical region | 3.18e-07 | 62 |
mucosa | 9.66e-07 | 20 |