FFCP PHASE1:Hg19::chr2:54895853..54895870,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6711 | |EntrezGene=6711 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=11275 | |HGNC=11275 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_BC009640_5end | |association_with_transcript=32bp_to_BC009640_5end | ||
|cluster_id=chr2:54895853..54895870,+ | |||
|description=CAGE_peak_12_at_SPTBN1_5end | |description=CAGE_peak_12_at_SPTBN1_5end | ||
|id=chr2:54895853..54895870,+ | |id=chr2:54895853..54895870,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.35e-08!34;UBERON:0003528!1.35e-08!34;UBERON:0002791!1.33e-07!33;UBERON:0001893!1.90e-07!34;UBERON:0001869!3.03e-07!32;UBERON:0005743!5.34e-07!86;UBERON:0002619!5.78e-07!22;UBERON:0001017!6.14e-07!82 | |ontology_enrichment_uberon=UBERON:0002020!1.35e-08!34;UBERON:0003528!1.35e-08!34;UBERON:0002791!1.33e-07!33;UBERON:0001893!1.90e-07!34;UBERON:0001869!3.03e-07!32;UBERON:0005743!5.34e-07!86;UBERON:0002619!5.78e-07!22;UBERON:0001017!6.14e-07!82 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.42e-08,34;UBERON:0002020,6.42e-08,34;UBERON:0000073,4.19e-07,53;UBERON:0002616,4.19e-07,53;UBERON:0001049,4.95e-07,56;UBERON:0005068,4.95e-07,56;UBERON:0006241,4.95e-07,56;UBERON:0007135,4.95e-07,56;UBERON:0002791,7.70e-07,32 | |||
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| ||
|short_description=p12@SPTBN1 | |short_description=p12@SPTBN1 | ||
}} | }} |
Latest revision as of 16:16, 17 September 2015
Short description: | p12@SPTBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SPTBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_BC009640_5end |
EntrezGene: | SPTBN1 |
HGNC: | 11275 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain grey matter | 6.42e-08 | 34 |
gray matter | 6.42e-08 | 34 |
regional part of nervous system | 4.19e-07 | 53 |
regional part of brain | 4.19e-07 | 53 |
neural tube | 4.95e-07 | 56 |
neural rod | 4.95e-07 | 56 |
future spinal cord | 4.95e-07 | 56 |
neural keel | 4.95e-07 | 56 |
regional part of telencephalon | 7.70e-07 | 32 |