Personal tools

FFCP PHASE2:Hg19::chr6:30293753..30293788,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:56658 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10065 |TSScla...")
 
No edit summary
 
Line 2: Line 2:
|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:56658
|EntrezGene=56658
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:10065
|HGNC=10065
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:A2AAZ5
|UniProt=A2AAZ5
|association_with_transcript=-467bp_to_ENST00000458516,uc003npz.2_5end
|association_with_transcript=-467bp_to_ENST00000458516,uc003npz.2_5end
|cluster_id=chr6:30293753..30293788,+
|cluster_id=chr6:30293753..30293788,+

Latest revision as of 16:16, 17 September 2015

Short description:p5@TRIM39
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_TRIM39_5end
Coexpression cluster:C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34
Association with transcript: -467bp_to_ENST00000458516, uc003npz.2_5end
EntrezGene:TRIM39
HGNC: 10065
UniProt: A2AAZ5
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20
25
30




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data