FFCP PHASE1:Hg19::chr1:1564390..1564417,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:1564390..1564417,+
|short_description=p8@MIB2
|description=CAGE_peak_8_at_MIB2_5end
|association_with_transcript=-68bp_to_ENST00000511910,uc001ago.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=142678 | |EntrezGene=142678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30577 | |HGNC=30577 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000511910,uc001ago.2_5end | |||
|cluster_id=chr1:1564390..1564417,+ | |||
|coexpression_cluster_id=C3880 | |||
|description=CAGE_peak_8_at_MIB2_5end | |||
|id=chr1:1564390..1564417,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.99e-20!18;CL:0000789!4.99e-20!18;CL:0002420!4.99e-20!18;CL:0002419!4.99e-20!18;CL:0000790!4.99e-20!18;CL:0000542!5.57e-18!53;CL:0000051!5.57e-18!53;CL:0000838!3.01e-17!52;CL:0000084!4.66e-16!25;CL:0000827!4.66e-16!25;CL:0000625!8.41e-13!11;CL:0002159!7.00e-10!13;CL:0000624!8.91e-08!6;CL:0000240!2.58e-07!6;CL:0000311!2.58e-07!6;CL:0000079!2.58e-07!6;CL:0000237!2.58e-07!6;CL:0000036!2.58e-07!6;CL:0000357!2.58e-07!6;CL:0000114!2.58e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.53e-30;18!CL:0000789;1.53e-30;18!CL:0002419;1.53e-30;18!CL:0000084;1.34e-25;25!CL:0000625;5.31e-19;11!CL:0000624;1.87e-11;6!CL:0002159;4.33e-10;14!CL:0000542;5.23e-10;53!CL:0002202;2.39e-08;9!CL:0002632;2.39e-08;9!CL:0000240;4.71e-08;6!CL:0000311;4.71e-08;6!CL:0000079;4.71e-08;6!CL:0000237;4.71e-08;6!CL:0002577;1.46e-07;3!CL:0002328;2.32e-07;3!CL:0000307;2.39e-07;3!CL:0000784;3.35e-07;3!CL:0000349;4.53e-07;19!CL:0000898;8.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.04e-30,18;CL:0000789,1.04e-30,18;CL:0002420,1.04e-30,18;CL:0002419,1.04e-30,18;CL:0000790,1.04e-30,18;CL:0000084,9.97e-26,25;CL:0000827,9.97e-26,25;CL:0000625,2.79e-19,11;CL:0000542,2.14e-18,53;CL:0000051,2.14e-18,53;CL:0000838,2.16e-17,52;CL:0000624,2.31e-11,6;CL:0002159,3.88e-10,14;CL:0002202,2.38e-08,9;CL:0002632,2.38e-08,9;CL:0000240,4.73e-08,6;CL:0000311,4.73e-08,6;CL:0000079,4.73e-08,6;CL:0000237,4.73e-08,6;CL:0000036,4.73e-08,6;CL:0000357,4.73e-08,6;CL:0000114,4.73e-08,6;CL:0002577,1.46e-07,3;CL:0002328,2.12e-07,3;CL:0000068,2.61e-07,3;CL:0000069,2.61e-07,3;CL:0000307,2.61e-07,3;CL:0000377,2.61e-07,3;CL:0000784,3.46e-07,3;CL:0000349,5.19e-07,19;CL:0000898,8.98e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.53e-30;18!CL:0000051;5.23e-10;53!CL:0000357;4.71e-08;6!CL:0000114;4.71e-08;6!CL:0000377;2.39e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.58e-07!14;UBERON:0000158!1.58e-07!14;UBERON:0000178!2.04e-07!15;UBERON:0000179!2.04e-07!15;UBERON:0000463!2.04e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.32e-07;3!UBERON:0002031;2.32e-07;3!UBERON:0000305;6.79e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.19e-10,14;UBERON:0000158,3.19e-10,14;UBERON:0002370,2.48e-08,4;UBERON:0005058,2.48e-08,4;UBERON:0009113,2.48e-08,4;UBERON:0003295,2.48e-08,4;UBERON:0005562,2.48e-08,4;UBERON:0001042,4.75e-08,10;UBERON:0009145,4.75e-08,10;UBERON:0004815,2.12e-07,3;UBERON:0002031,2.12e-07,3;UBERON:0006562,3.24e-07,11;UBERON:0000305,8.43e-07,7 | |||
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|short_description=p8@MIB2 | |||
}} | }} |
Latest revision as of 16:04, 17 September 2015
Short description: | p8@MIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MIB2_5end |
Coexpression cluster: | C3880_Placental_amniotic_Corneal_Bronchial_Keratinocyte_Tracheal_Esophageal |
Association with transcript: | -68bp_to_ENST00000511910, uc001ago.2_5end |
EntrezGene: | MIB2 |
HGNC: | 30577 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.19e-10 | 14 |
membranous layer | 3.19e-10 | 14 |
thymus | 2.48e-08 | 4 |
hemolymphoid system gland | 2.48e-08 | 4 |
thymic region | 2.48e-08 | 4 |
pharyngeal gland | 2.48e-08 | 4 |
thymus primordium | 2.48e-08 | 4 |
chordate pharynx | 4.75e-08 | 10 |
pharyngeal region of foregut | 4.75e-08 | 10 |
lower respiratory tract epithelium | 2.12e-07 | 3 |
epithelium of bronchus | 2.12e-07 | 3 |
pharynx | 3.24e-07 | 11 |
amnion | 8.43e-07 | 7 |