FFCP PHASE1:Hg19::chr3:196366587..196366604,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375387 | |EntrezGene=375387 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24613 | |HGNC=24613 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000461791_5end | |association_with_transcript=-23bp_to_ENST00000461791_5end | ||
|cluster_id=chr3:196366587..196366604,+ | |||
|coexpression_cluster_id=C2737 | |coexpression_cluster_id=C2737 | ||
|description=CAGE_peak_3_at_LRRC33_5end | |description=CAGE_peak_3_at_LRRC33_5end | ||
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|ontology_enrichment_celltype=CL:0000037!4.12e-63!172;CL:0000566!4.12e-63!172;CL:0000988!4.54e-60!182;CL:0002032!1.70e-58!165;CL:0000837!1.70e-58!165;CL:0000738!4.72e-50!140;CL:0000763!8.73e-42!112;CL:0000049!8.73e-42!112;CL:0002087!2.00e-41!119;CL:0002031!2.22e-41!124;CL:0000557!4.74e-29!71;CL:0000766!1.27e-28!76;CL:0000839!2.46e-26!70;CL:0002009!4.44e-26!65;CL:0002194!3.39e-25!63;CL:0000576!3.39e-25!63;CL:0000040!3.39e-25!63;CL:0000559!3.39e-25!63;CL:0002057!3.65e-20!42;CL:0000860!2.62e-17!45;CL:0000542!3.50e-14!53;CL:0000051!3.50e-14!53;CL:0000134!3.80e-14!358;CL:0000838!1.30e-13!52;CL:0002320!4.42e-13!365;CL:0000219!3.15e-12!390;CL:0000034!1.35e-10!444;CL:0000048!1.21e-09!430;CL:0000723!5.41e-09!436;CL:0000945!1.14e-07!24;CL:0000826!1.14e-07!24;CL:0000451!1.58e-07!10;CL:0002393!2.05e-07!9;CL:0002397!2.05e-07!9 | |ontology_enrichment_celltype=CL:0000037!4.12e-63!172;CL:0000566!4.12e-63!172;CL:0000988!4.54e-60!182;CL:0002032!1.70e-58!165;CL:0000837!1.70e-58!165;CL:0000738!4.72e-50!140;CL:0000763!8.73e-42!112;CL:0000049!8.73e-42!112;CL:0002087!2.00e-41!119;CL:0002031!2.22e-41!124;CL:0000557!4.74e-29!71;CL:0000766!1.27e-28!76;CL:0000839!2.46e-26!70;CL:0002009!4.44e-26!65;CL:0002194!3.39e-25!63;CL:0000576!3.39e-25!63;CL:0000040!3.39e-25!63;CL:0000559!3.39e-25!63;CL:0002057!3.65e-20!42;CL:0000860!2.62e-17!45;CL:0000542!3.50e-14!53;CL:0000051!3.50e-14!53;CL:0000134!3.80e-14!358;CL:0000838!1.30e-13!52;CL:0002320!4.42e-13!365;CL:0000219!3.15e-12!390;CL:0000034!1.35e-10!444;CL:0000048!1.21e-09!430;CL:0000723!5.41e-09!436;CL:0000945!1.14e-07!24;CL:0000826!1.14e-07!24;CL:0000451!1.58e-07!10;CL:0002393!2.05e-07!9;CL:0002397!2.05e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000576;2.76e-20;48!CL:0000473;2.54e-19;39!CL:0000234;2.54e-19;39!CL:0000766;3.26e-18;69!CL:0000763;8.76e-18;100!CL:0000860;6.70e-17;33!CL:0002057;6.70e-17;33!CL:0000738;1.99e-15;136!CL:0002087;3.17e-13;104!CL:0000988;5.07e-13;177!CL:0000451;1.46e-11;10!CL:0000990;9.98e-10;8!CL:0002393;2.43e-08;6!CL:0002397;2.43e-08;6!CL:0000235;3.86e-08;6!CL:0000945;9.12e-08;24!CL:0000840;2.02e-07;5!CL:0000542;4.23e-07;53 | |ontology_enrichment_celltype_v019=CL:0000576;2.76e-20;48!CL:0000473;2.54e-19;39!CL:0000234;2.54e-19;39!CL:0000766;3.26e-18;69!CL:0000763;8.76e-18;100!CL:0000860;6.70e-17;33!CL:0002057;6.70e-17;33!CL:0000738;1.99e-15;136!CL:0002087;3.17e-13;104!CL:0000988;5.07e-13;177!CL:0000451;1.46e-11;10!CL:0000990;9.98e-10;8!CL:0002393;2.43e-08;6!CL:0002397;2.43e-08;6!CL:0000235;3.86e-08;6!CL:0000945;9.12e-08;24!CL:0000840;2.02e-07;5!CL:0000542;4.23e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.50e-85,168;CL:0000988,7.44e-83,177;CL:0002032,7.72e-78,161;CL:0000837,7.72e-78,161;CL:0000738,1.54e-67,136;CL:0000763,1.29e-64,108;CL:0000049,1.29e-64,108;CL:0002087,9.31e-55,115;CL:0002031,1.40e-53,120;CL:0000557,5.01e-47,67;CL:0000766,2.02e-46,72;CL:0002009,1.72e-43,61;CL:0000839,2.56e-42,66;CL:0002194,5.14e-42,59;CL:0000576,5.14e-42,59;CL:0000040,5.14e-42,59;CL:0000559,5.14e-42,59;CL:0000473,3.01e-34,48;CL:0000234,3.01e-34,48;CL:0000860,7.72e-28,42;CL:0002057,7.72e-28,42;CL:0000134,1.72e-23,354;CL:0002320,2.92e-22,361;CL:0000219,3.52e-20,386;CL:0000034,8.17e-14,441;CL:0000048,9.13e-14,427;CL:0000723,4.57e-13,433;CL:0000542,2.07e-12,53;CL:0000051,2.07e-12,53;CL:0000838,1.17e-11,52;CL:0000451,1.76e-11,10;CL:0002393,2.73e-11,9;CL:0002397,2.73e-11,9;CL:0000990,1.24e-09,8;CL:0000235,4.39e-08,6;CL:0000945,6.77e-08,24;CL:0000826,6.77e-08,24;CL:0000840,2.11e-07,5;CL:0001029,2.11e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.99e-20;42!CL:0000049;5.47e-18;108!CL:0000051;4.23e-07;53 | |ontology_enrichment_development_v019=CL:0002057;4.99e-20;42!CL:0000049;5.47e-18;108!CL:0000051;4.23e-07;53 | ||
|ontology_enrichment_disease=DOID:2531!1.91e-18!51;DOID:0060083!1.91e-18!51;DOID:1240!2.04e-16!39;DOID:8692!1.55e-12!31 | |ontology_enrichment_disease=DOID:2531!1.91e-18!51;DOID:0060083!1.91e-18!51;DOID:1240!2.04e-16!39;DOID:8692!1.55e-12!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.02e-16;39!DOID:8692;5.79e-16;31!DOID:2531;1.90e-13;51!DOID:0060083;1.90e-13;51 | |ontology_enrichment_disease_v019=DOID:1240;4.02e-16;39!DOID:8692;5.79e-16;31!DOID:2531;1.90e-13;51!DOID:0060083;1.90e-13;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.16e-23,51;DOID:0060083,2.16e-23,51;DOID:1240,5.15e-22,39;DOID:8692,1.43e-16,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.25e-36!102;UBERON:0003061!9.25e-36!102;UBERON:0002193!4.29e-33!112;UBERON:0002371!4.84e-26!80;UBERON:0001474!1.51e-22!86;UBERON:0002405!4.02e-18!115;UBERON:0004765!9.79e-17!101;UBERON:0001434!9.79e-17!101;UBERON:0003081!1.27e-14!216;UBERON:0002384!2.92e-12!375;UBERON:0002204!7.40e-08!167;UBERON:0000178!2.55e-07!15;UBERON:0000179!2.55e-07!15;UBERON:0000463!2.55e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!9.25e-36!102;UBERON:0003061!9.25e-36!102;UBERON:0002193!4.29e-33!112;UBERON:0002371!4.84e-26!80;UBERON:0001474!1.51e-22!86;UBERON:0002405!4.02e-18!115;UBERON:0004765!9.79e-17!101;UBERON:0001434!9.79e-17!101;UBERON:0003081!1.27e-14!216;UBERON:0002384!2.92e-12!375;UBERON:0002204!7.40e-08!167;UBERON:0000178!2.55e-07!15;UBERON:0000179!2.55e-07!15;UBERON:0000463!2.55e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-10;15!UBERON:0000179;2.34e-10;15!UBERON:0000463;2.34e-10;15!UBERON:0002390;3.61e-09;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-10;15!UBERON:0000179;2.34e-10;15!UBERON:0000463;2.34e-10;15!UBERON:0002390;3.61e-09;32 | ||
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| ||
|short_description=p3@LRRC33 | |short_description=p3@LRRC33 | ||
}} | }} |
Latest revision as of 15:52, 17 September 2015
Short description: | p3@LRRC33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC33_5end |
Coexpression cluster: | C2737_Monocytederived_granulocyte_chronic_Dendritic_Basophils_Macrophage_CD14 |
Association with transcript: | -23bp_to_ENST00000461791_5end |
EntrezGene: | LRRC33 |
HGNC: | 24613 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.09e-57 | 98 |
blood island | 1.09e-57 | 98 |
hemolymphoid system | 7.15e-51 | 108 |
bone marrow | 3.62e-42 | 76 |
immune system | 7.45e-41 | 93 |
bone element | 1.86e-37 | 82 |
skeletal element | 3.47e-32 | 90 |
skeletal system | 7.80e-27 | 100 |
connective tissue | 9.76e-22 | 371 |
lateral plate mesoderm | 4.43e-18 | 203 |
blood | 2.02e-10 | 15 |
haemolymphatic fluid | 2.02e-10 | 15 |
organism substance | 2.02e-10 | 15 |
musculoskeletal system | 4.93e-10 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.16e-23 | 51 |
immune system cancer | 2.16e-23 | 51 |
leukemia | 5.15e-22 | 39 |
myeloid leukemia | 1.43e-16 | 31 |