FFCP PHASE1:Hg19::chr19:36606933..36606954,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1155 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1989 | |||
|TSSclassifier=strong | |||
|UniProt=Q6FGY5 | |||
|association_with_transcript=-27bp_to_CR541971_5end | |||
|cluster_id=chr19:36606933..36606954,+ | |||
|description=CAGE_peak_4_at_TBCB_5end | |||
|id=chr19:36606933..36606954,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.42e-24!180;CL:0000680!6.63e-13!57;CL:0000056!6.63e-13!57;CL:0000355!6.63e-13!57;CL:0000192!2.39e-12!42;CL:0000514!2.39e-12!42;CL:0000187!6.59e-12!54;CL:0000222!1.79e-11!119;CL:0000057!2.16e-11!75;CL:0000393!2.62e-11!60;CL:0000211!2.62e-11!60;CL:0000183!4.06e-11!59;CL:0000359!1.66e-10!32;CL:0000220!4.84e-08!246;CL:0002321!4.87e-08!248;CL:0000144!7.71e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.68e-15;32!CL:0000192;1.16e-11;43!CL:0002592;7.10e-08;3!CL:0000187;8.91e-07;55!CL:0002595;9.56e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.99e-17,32;CL:0000192,7.08e-16,43;CL:0000514,7.08e-16,43;CL:0000680,1.69e-11,58;CL:0000056,1.69e-11,58;CL:0000355,1.69e-11,58;CL:0000187,3.91e-11,55;CL:0000393,1.46e-10,61;CL:0000211,1.46e-10,61;CL:0002592,6.31e-08,3;CL:0002595,4.11e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;1.16e-11;43!CL:0000355;3.24e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.47e-07;3!DOID:127;7.47e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.31e-07,3;DOID:127,7.31e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.39e-15!83;UBERON:0002329!5.39e-15!83;UBERON:0003077!5.39e-15!83;UBERON:0003059!5.39e-15!83;UBERON:0007282!5.39e-15!83;UBERON:0009618!5.39e-15!83;UBERON:0007285!5.39e-15!83;UBERON:0001637!9.29e-14!42;UBERON:0003509!9.29e-14!42;UBERON:0004572!9.29e-14!42;UBERON:0004290!2.86e-13!70;UBERON:0004573!6.63e-12!33;UBERON:0004571!6.63e-12!33;UBERON:0000486!8.76e-12!82;UBERON:0001134!1.87e-11!61;UBERON:0002036!1.87e-11!61;UBERON:0003082!1.87e-11!61;UBERON:0002385!7.22e-11!63;UBERON:0001015!7.22e-11!63;UBERON:0000383!7.22e-11!63;UBERON:0002049!1.74e-10!79;UBERON:0007798!1.74e-10!79;UBERON:0005256!1.96e-10!143;UBERON:0001981!5.56e-10!60;UBERON:0007500!5.56e-10!60;UBERON:0004537!5.56e-10!60;UBERON:0006965!5.56e-10!60;UBERON:0004872!2.75e-09!84;UBERON:0000490!7.28e-09!138;UBERON:0000055!7.65e-09!69;UBERON:0004535!1.21e-08!110;UBERON:0001009!5.18e-08!113;UBERON:0003914!1.10e-07!118;UBERON:0000475!1.42e-07!365;UBERON:0002100!1.95e-07!216;UBERON:0000483!2.86e-07!309;UBERON:0000119!5.22e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.08e-11;33!UBERON:0004571;1.08e-11;33!UBERON:0001637;8.62e-11;42!UBERON:0003509;8.62e-11;42!UBERON:0004572;8.62e-11;42!UBERON:0003498;7.10e-08;3!UBERON:0005985;7.10e-08;3!UBERON:0001621;7.10e-08;3!UBERON:0007500;1.25e-07;56!UBERON:0001981;1.25e-07;56!UBERON:0004537;1.25e-07;56!UBERON:0003513;4.75e-07;7!UBERON:0003834;9.56e-07;5!UBERON:0001533;9.56e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.14e-16,42;UBERON:0003509,2.14e-16,42;UBERON:0004572,2.14e-16,42;UBERON:0004573,2.32e-14,33;UBERON:0004571,2.32e-14,33;UBERON:0002329,2.24e-11,71;UBERON:0003059,2.24e-11,71;UBERON:0007282,2.24e-11,71;UBERON:0004290,2.24e-11,71;UBERON:0009618,2.24e-11,71;UBERON:0007500,3.83e-11,59;UBERON:0001981,3.83e-11,59;UBERON:0004537,3.83e-11,59;UBERON:0006965,3.83e-11,59;UBERON:0003077,3.99e-11,72;UBERON:0007285,3.99e-11,72;UBERON:0007524,7.00e-11,73;UBERON:0007503,8.68e-11,78;UBERON:0001134,2.24e-10,62;UBERON:0002036,2.24e-10,62;UBERON:0003082,2.24e-10,62;UBERON:0000055,5.17e-10,68;UBERON:0002385,7.18e-10,64;UBERON:0001015,7.18e-10,64;UBERON:0000383,7.18e-10,64;UBERON:0000486,9.51e-10,83;UBERON:0004872,9.56e-10,83;UBERON:0002049,8.70e-09,78;UBERON:0007798,8.70e-09,78;UBERON:0001621,6.31e-08,3;UBERON:0003498,1.22e-07,5;UBERON:0005985,1.22e-07,5;UBERON:0003513,2.23e-07,7;UBERON:0004535,3.02e-07,109;UBERON:0003834,4.11e-07,5;UBERON:0001533,4.11e-07,5;UBERON:0003914,5.73e-07,117;UBERON:0005256,5.87e-07,122;UBERON:0001009,7.10e-07,112 | |||
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| |||
|short_description=p4@TBCB | |||
}} |
Latest revision as of 15:46, 17 September 2015
Short description: | p4@TBCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TBCB_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_CR541971_5end |
EntrezGene: | TBCB |
HGNC: | 1989 |
UniProt: | Q6FGY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.99e-17 | 32 |
smooth muscle cell | 7.08e-16 | 43 |
smooth muscle myoblast | 7.08e-16 | 43 |
muscle precursor cell | 1.69e-11 | 58 |
myoblast | 1.69e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.69e-11 | 58 |
muscle cell | 3.91e-11 | 55 |
electrically responsive cell | 1.46e-10 | 61 |
electrically active cell | 1.46e-10 | 61 |
smooth muscle cell of the coronary artery | 6.31e-08 | 3 |
smooth muscle cell of the subclavian artery | 4.11e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.31e-07 | 3 |
leiomyoma | 7.31e-07 | 3 |