FFCP PHASE1:Hg19::chr17:74540344..74540355,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:74540344..74540355,+
|short_description=p8@PRCD
|description=CAGE_peak_8_at_PRCD_5end
|association_with_transcript=459bp_to_uc002jrz.1_5end
|EntrezGene=7...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=768206 | |EntrezGene=768206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32528 | |HGNC=32528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=459bp_to_uc002jrz.1_5end | |||
|cluster_id=chr17:74540344..74540355,+ | |||
|coexpression_cluster_id=C3681 | |||
|description=CAGE_peak_8_at_PRCD_5end | |||
|id=chr17:74540344..74540355,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.45e-40;5!CL:0002321;2.85e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!3.79e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;7.68e-34;6!DOID:3095;4.13e-21;22!DOID:2994;4.13e-21;22!DOID:171;8.12e-21;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.35e-34,6;DOID:3095,4.27e-21,22;DOID:2994,4.27e-21,22;DOID:171,8.54e-21,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000013;2.45e-40;5!UBERON:0002410;2.45e-40;5!UBERON:0001875;8.10e-26;2!UBERON:0006514;8.10e-26;2!UBERON:0000010;5.43e-23;8!UBERON:0009663;2.26e-08;7!UBERON:0002420;8.61e-07;9!UBERON:0000125;8.61e-07;9!UBERON:0007245;8.61e-07;9!UBERON:0002308;8.61e-07;9!UBERON:0010009;8.61e-07;9!UBERON:0010011;8.61e-07;9!UBERON:0000454;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.71e-40,5;UBERON:0002410,2.71e-40,5;UBERON:0001875,7.14e-26,2;UBERON:0006514,7.14e-26,2;UBERON:0000010,5.74e-23,8;UBERON:0009663,2.18e-08,7;UBERON:0002420,8.37e-07,9;UBERON:0000125,8.37e-07,9;UBERON:0007245,8.37e-07,9;UBERON:0002308,8.37e-07,9;UBERON:0010009,8.37e-07,9;UBERON:0010011,8.37e-07,9;UBERON:0000454,8.37e-07,9 | |||
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|short_description=p8@PRCD | |||
}} | }} |
Latest revision as of 15:44, 17 September 2015
Short description: | p8@PRCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PRCD_5end |
Coexpression cluster: | C3681_neuroblastoma_optic_teratocarcinoma_substantia_diencephalon_corpus_globus |
Association with transcript: | 459bp_to_uc002jrz.1_5end |
EntrezGene: | PRCD |
HGNC: | 32528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.71e-40 | 5 |
autonomic nervous system | 2.71e-40 | 5 |
globus pallidus | 7.14e-26 | 2 |
pallidum | 7.14e-26 | 2 |
peripheral nervous system | 5.74e-23 | 8 |
telencephalic nucleus | 2.18e-08 | 7 |
basal ganglion | 8.37e-07 | 9 |
neural nucleus | 8.37e-07 | 9 |
nuclear complex of neuraxis | 8.37e-07 | 9 |
nucleus of brain | 8.37e-07 | 9 |
aggregate regional part of brain | 8.37e-07 | 9 |
collection of basal ganglia | 8.37e-07 | 9 |
cerebral subcortex | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.35e-34 | 6 |
germ cell and embryonal cancer | 4.27e-21 | 22 |
germ cell cancer | 4.27e-21 | 22 |
neuroectodermal tumor | 8.54e-21 | 10 |