FFCP PHASE1:Hg19::chr19:36606181..36606194,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:36606181..36606194,- to FFCP PHASE1:Hg19::chr19:36606181..36606194,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5438 | |EntrezGene=5438 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9196 | |HGNC=9196 | ||
|TSSclassifier=strong | |||
|UniProt=P36954 | |UniProt=P36954 | ||
|association_with_transcript=11bp_to_ENST00000221859,NM_006233,uc002ode.2,uc002odf.2_5end | |||
|cluster_id=chr19:36606181..36606194,- | |||
|description=CAGE_peak_6_at_POLR2I_5end | |||
|id=chr19:36606181..36606194,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;8.52e-12;2!CL:0002553;3.40e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.53e-11,8;CL:0002553,3.52e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.93e-07;1 | |||
|ontology_enrichment_disease=DOID:162!3.16e-08!235;DOID:14566!2.17e-07!239;DOID:0050686!6.75e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;3.42e-12;2!UBERON:0000122;3.42e-12;2!UBERON:0000941;3.93e-07;1!UBERON:0001785;3.93e-07;1!UBERON:0002464;3.93e-07;1!UBERON:0004904;3.93e-07;1!UBERON:0001021;3.93e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,3.96e-12,2;UBERON:0000122,3.96e-12,2;UBERON:0000941,3.73e-07,1;UBERON:0001785,3.73e-07,1;UBERON:0002464,3.73e-07,1;UBERON:0004904,3.73e-07,1;UBERON:0001021,3.73e-07,1;UBERON:0003902,3.73e-07,1;UBERON:0005425,3.73e-07,1;UBERON:0002038,7.82e-07,1;UBERON:0009661,7.82e-07,1;UBERON:0002950,7.82e-07,1;UBERON:0001891,7.82e-07,1;UBERON:0009616,7.82e-07,1;UBERON:0010286,7.82e-07,1 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0.697801167972428,1.09220686065086,0.527533956456907,0,0,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.410623275218653,0.125542639594803,0.229240217243854,0.328402357799783,0.314843125254717,0,0,0.309632246632152,0,0.90361775633475,0,0.542270404062111,0.284338464974843,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0.628975936525128,0.22465726229299,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0.443067789167242,0,0.25618263945135,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,0,0.670700859703636,0.383587685530591,0,0,0.289693037921647,0,0,0,0.443458794925128,0.263504357079378,0.392937226493138,0.728590576585084,0.370784442784429,0.649094787309367,0.348259474598534,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0.337834441449967,0,0,0,0,0,0.872188104285069,0.496971951695318,0.25326102332916,0,0,0,0.560677600142307,0,0.49333509683432,0,0,0.326923806226917,0.302714855289863,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0,0.469737994575059,0.485618833104395,0.561803226808994,0,0.491337269247072,0,0,0.494533858557114,0.910161361938026,0,0.505008341862199,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.201504196455281,0,0.193260853163297,0.818238361772504,0,0.487894824518382,0.795178609928912,0.69716365721711,0.932949495138334,1.26160425437814,0.72995471815166,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.441175890929576,0.653638332277218,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,1.32438929824395,0.245976877086227,0,0.329250856225877,0,0,0.370353780634118,0,1.03993478527958,0,0.463721619900307,0.469634776943287,0.433099343283221,0,0,0,0.858486162094873,0,0.468008530278475,0,0,0.16798212819886,0.283550194484773,0.268675568108545,0.290633938513962,0.383382679165211,0,0.264145302039678,0.621984346622316,0.144119953416961,0,0.63497894292169,0.763976851116555,0,0,0.308482478109971,0,0.285826432630578,0.224262168690721,0,0.4400297149257,0.646358578788889,0,0,0,0,0.257207374262142,2.83698264046557,0.532844358032199,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,1.2162378064119,0,2.10833939483032,0.479249710983165,0,0,0.144781306667579,0,0.358121926479791,0.224170287987055,0.197030760201927,0.215627574859517,0.128343036279748,1.27047312111232,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0.587403472388222,0.343143423810856,0.413536052245775,0,0.213455115606889,0.606255142892519,4.99306318531491,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0.355123450626254,0.246381468041427,1.03850885836724,0.232420756919918,0.846016147141356,0.200506470303285,0,0,0.546273504020151,0,0.902399225814824,0.308061348417659,0,0,0.527758144464379,0,0.340187410553031,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0.831076008928724,0.671624264166535,0.219259876645935,0.522870902049801,0.256450125116389,0.328014645699706,0.325378394664303,0.206082023295445,0.27470839445503,0,0.574265537996172,0.650060246036521,0,0.290012154876366,0.154048617114644,0,0,0.107420244868274,0,0.255679882248303,0.178064071293475,0.495854746082934,0,0,0.2023155617111,0,0,0,0,0.532306030317022,0.869932992075073,0,0.286249773483982,0,0.949138274156178,0.38126038784765,0.767693373934002,0.42793898803392,0.318203247925937,1.56989728039846,0.179872457583315,0,0.235624804691373,0.404364963146632,0,0,0.975267478179181,0,1.05650146756755,0.272999822815972,0,0,0.551365343546124,0,0,0.578775534266688,0,0.202910376962704,0,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,0,0.329294892959902,0.75894634753143,0,0.384888450902048,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0.427296284509893,0,0,0.929015875628594,0.721346064882224,0.426851060090485,0.637705090915289,0.199579371432817,0,0.211673582723883,0.973865820823666,0.280797178113459,0.228234679033192,0.94007937463814,0,0,0.802940375518498,0.80719882876419,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0.19538809540204,0,1.23087398947712,0.540911356951966,0.99921590399346,0,0.18714054040822,0,0.121360521749513,0,0,0.716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| ||
|short_description=p6@POLR2I | |||
}} | }} |
Latest revision as of 15:44, 17 September 2015
Short description: | p6@POLR2I |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_POLR2I_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000221859, NM_006233, uc002ode.2, uc002odf.2_5end |
EntrezGene: | POLR2I |
HGNC: | 9196 |
UniProt: | P36954 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.53e-11 | 8 |
lung fibroblast | 3.52e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 3.96e-12 | 2 |
neuron projection bundle | 3.96e-12 | 2 |
cranial nerve II | 3.73e-07 | 1 |
cranial nerve | 3.73e-07 | 1 |
nerve trunk | 3.73e-07 | 1 |
nerve connecting eye with brain | 3.73e-07 | 1 |
nerve | 3.73e-07 | 1 |
retinal neural layer | 3.73e-07 | 1 |
presumptive neural retina | 3.73e-07 | 1 |
substantia nigra | 7.82e-07 | 1 |
midbrain nucleus | 7.82e-07 | 1 |
regional part of midbrain | 7.82e-07 | 1 |
midbrain | 7.82e-07 | 1 |
presumptive midbrain | 7.82e-07 | 1 |
midbrain neural tube | 7.82e-07 | 1 |