FFCP PHASE1:Hg19::chr1:33160859..33160872,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81493 | |EntrezGene=81493 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28897 | |HGNC=28897 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H7C4 | |UniProt=Q9H7C4 | ||
|association_with_transcript=0bp_to_AK024707_5end | |association_with_transcript=0bp_to_AK024707_5end | ||
|cluster_id=chr1:33160859..33160872,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_12_at_SYNC_5end | |description=CAGE_peak_12_at_SYNC_5end | ||
|id=chr1:33160859..33160872,- | |id=chr1:33160859..33160872,- | ||
|ontology_enrichment_celltype=CL:0002274!4.77e-18!5;CL:0000457!4.77e-18!5;CL:0002191!4.77e-18!5;CL:0000097!4.77e-18!5;CL:0000831!4.77e-18!5;CL:0002028!4.77e-18!5;CL:0000163!7.14e-10!9;CL:0000569!2.93e-08!4;CL:0000011!2.93e-08!4 | |ontology_enrichment_celltype=CL:0002274!4.77e-18!5;CL:0000457!4.77e-18!5;CL:0002191!4.77e-18!5;CL:0000097!4.77e-18!5;CL:0000831!4.77e-18!5;CL:0002028!4.77e-18!5;CL:0000163!7.14e-10!9;CL:0000569!2.93e-08!4;CL:0000011!2.93e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.42e-22;12!CL:0002567;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.42e-22,12;CL:0002567,8.99e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.73e-29;1!UBERON:0004161;5.23e-24;11!UBERON:0009497;1.90e-20;13!UBERON:0003056;1.04e-10;3!UBERON:0001041;2.76e-09;30!UBERON:0003104;7.89e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;1.21e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.73e-07,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.73e-29;1!UBERON:0001785;2.73e-29;1!UBERON:0002464;2.73e-29;1!UBERON:0004904;2.73e-29;1!UBERON:0001021;2.73e-29;1!UBERON:0003714;2.21e-15;2!UBERON:0005162;2.21e-15;2!UBERON:0000122;2.21e-15;2!UBERON:0002107;3.02e-14;19!UBERON:0006925;3.02e-14;19!UBERON:0002423;5.28e-11;25!UBERON:0002365;2.25e-08;31!UBERON:0002330;2.25e-08;31!UBERON:0002368;6.43e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0003714,2.05e-15,2;UBERON:0005162,2.05e-15,2;UBERON:0000122,2.05e-15,2;UBERON:0002107,3.02e-14,19;UBERON:0006925,3.02e-14,19;UBERON:0008836,3.02e-14,19;UBERON:0008835,2.09e-12,22;UBERON:0003894,2.09e-12,22;UBERON:0009854,6.73e-12,23;UBERON:0007499,5.28e-11,25;UBERON:0009497,5.28e-11,25;UBERON:0000015,5.28e-11,25;UBERON:0002423,5.28e-11,25;UBERON:0006235,5.28e-11,25;UBERON:0004161,5.28e-11,25;UBERON:0009856,1.31e-10,26;UBERON:0002365,5.24e-09,31;UBERON:0002330,5.24e-09,31;UBERON:0001781,2.26e-08,4;UBERON:0002368,4.72e-08,35 | |||
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| ||
|short_description=p12@SYNC | |short_description=p12@SYNC | ||
}} | }} |
Latest revision as of 15:41, 17 September 2015
Short description: | p12@SYNC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SYNC_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 0bp_to_AK024707_5end |
EntrezGene: | SYNC |
HGNC: | 28897 |
UniProt: | Q9H7C4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.42e-22 | 12 |
light melanocyte | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.37e-29 | 1 |
cranial nerve | 2.37e-29 | 1 |
nerve trunk | 2.37e-29 | 1 |
nerve connecting eye with brain | 2.37e-29 | 1 |
nerve | 2.37e-29 | 1 |
retinal neural layer | 2.37e-29 | 1 |
presumptive neural retina | 2.37e-29 | 1 |
neural tissue | 2.05e-15 | 2 |
multi cell component structure | 2.05e-15 | 2 |
neuron projection bundle | 2.05e-15 | 2 |
liver | 3.02e-14 | 19 |
digestive gland | 3.02e-14 | 19 |
liver bud | 3.02e-14 | 19 |
hepatic diverticulum | 2.09e-12 | 22 |
liver primordium | 2.09e-12 | 22 |
digestive tract diverticulum | 6.73e-12 | 23 |
epithelial sac | 5.28e-11 | 25 |
epithelium of foregut-midgut junction | 5.28e-11 | 25 |
anatomical boundary | 5.28e-11 | 25 |
hepatobiliary system | 5.28e-11 | 25 |
foregut-midgut junction | 5.28e-11 | 25 |
septum transversum | 5.28e-11 | 25 |
sac | 1.31e-10 | 26 |
exocrine gland | 5.24e-09 | 31 |
exocrine system | 5.24e-09 | 31 |
layer of retina | 2.26e-08 | 4 |
endocrine gland | 4.72e-08 | 35 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.73e-07 | 39 |