FFCP PHASE1:Hg19::chr10:23384485..23384525,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:23384485..23384525,+ to FFCP PHASE1:Hg19::chr10:23384485..23384525,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22921 | |EntrezGene=22921 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17061 | |HGNC=17061 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3D2 | |UniProt=Q9Y3D2 | ||
|association_with_transcript=50bp_to_ENST00000376510_5end | |||
|cluster_id=chr10:23384485..23384525,+ | |||
|description=CAGE_peak_1_at_MSRB2_5end | |||
|id=chr10:23384485..23384525,+ | |||
|ontology_enrichment_celltype=CL:0000183!1.24e-19!59;CL:0000187!8.41e-18!54;CL:0000680!1.08e-17!57;CL:0000056!1.08e-17!57;CL:0000355!1.08e-17!57;CL:0000192!1.07e-16!42;CL:0000514!1.07e-16!42;CL:0000393!1.13e-13!60;CL:0000211!1.13e-13!60;CL:0000359!8.68e-13!32;CL:0000055!1.08e-12!180;CL:0000222!2.15e-12!119;CL:0000220!8.67e-08!246;CL:0000136!1.23e-07!15;CL:0002321!1.40e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.90e-12;32!CL:0000192;1.66e-11;43!CL:0000187;1.07e-09;55!CL:0000136;3.24e-07;13!CL:0000393;3.79e-07;61!CL:0000211;3.79e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.04e-17,55;CL:0000680,1.29e-17,58;CL:0000056,1.29e-17,58;CL:0000355,1.29e-17,58;CL:0000192,1.46e-16,43;CL:0000514,1.46e-16,43;CL:0000393,1.22e-13,61;CL:0000211,1.22e-13,61;CL:0000359,8.68e-13,32;CL:0000222,1.83e-12,121;CL:0002321,1.12e-07,250;CL:0000136,1.23e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.66e-11;43!CL:0000355;1.60e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.94e-22!143;UBERON:0002385!1.26e-20!63;UBERON:0001015!1.26e-20!63;UBERON:0000383!1.26e-20!63;UBERON:0000914!1.86e-20!83;UBERON:0002329!1.86e-20!83;UBERON:0003077!1.86e-20!83;UBERON:0003059!1.86e-20!83;UBERON:0007282!1.86e-20!83;UBERON:0009618!1.86e-20!83;UBERON:0007285!1.86e-20!83;UBERON:0001134!8.22e-20!61;UBERON:0002036!8.22e-20!61;UBERON:0003082!8.22e-20!61;UBERON:0004290!4.29e-19!70;UBERON:0000486!9.58e-19!82;UBERON:0000481!4.40e-18!347;UBERON:0002100!7.22e-18!216;UBERON:0000475!5.87e-15!365;UBERON:0003104!1.64e-14!238;UBERON:0009142!1.64e-14!238;UBERON:0000468!9.27e-14!659;UBERON:0003914!3.28e-13!118;UBERON:0000490!1.01e-12!138;UBERON:0000483!1.46e-12!309;UBERON:0000119!5.28e-12!312;UBERON:0004872!2.66e-11!84;UBERON:0000467!8.46e-11!625;UBERON:0000480!1.04e-10!626;UBERON:0000477!2.57e-10!286;UBERON:0000922!4.89e-10!612;UBERON:0002050!7.22e-10!605;UBERON:0005423!7.22e-10!605;UBERON:0000923!9.67e-10!604;UBERON:0005291!9.67e-10!604;UBERON:0006598!9.67e-10!604;UBERON:0002532!9.67e-10!604;UBERON:0007100!1.86e-09!27;UBERON:0000926!2.01e-09!448;UBERON:0004120!2.01e-09!448;UBERON:0006603!2.01e-09!448;UBERON:0004111!4.01e-09!241;UBERON:0003103!5.90e-09!69;UBERON:0002049!2.26e-08!79;UBERON:0007798!2.26e-08!79;UBERON:0001981!2.94e-08!60;UBERON:0007500!2.94e-08!60;UBERON:0004537!2.94e-08!60;UBERON:0006965!2.94e-08!60;UBERON:0000025!9.07e-08!194;UBERON:0000948!1.10e-07!24;UBERON:0005498!1.10e-07!24;UBERON:0004140!1.10e-07!24;UBERON:0009881!1.10e-07!24;UBERON:0004141!1.10e-07!24;UBERON:0003084!1.10e-07!24;UBERON:0007005!1.10e-07!24;UBERON:0004139!1.10e-07!24;UBERON:0004291!1.10e-07!24;UBERON:0001009!1.21e-07!113;UBERON:0000055!1.50e-07!69;UBERON:0001135!9.35e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.50e-09;25!UBERON:0002385;2.74e-08;31!UBERON:0001015;2.74e-08;31!UBERON:0000383;2.74e-08;31!UBERON:0000948;2.71e-07;22!UBERON:0001135;9.95e-07;15 | |||
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9039 | ||
|short_description=p1@MSRB2 | |||
}} | }} |
Latest revision as of 15:30, 17 September 2015
Short description: | p1@MSRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MSRB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000376510_5end |
EntrezGene: | MSRB2 |
HGNC: | 17061 |
UniProt: | Q9Y3D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.04e-17 | 55 |
muscle precursor cell | 1.29e-17 | 58 |
myoblast | 1.29e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.29e-17 | 58 |
smooth muscle cell | 1.46e-16 | 43 |
smooth muscle myoblast | 1.46e-16 | 43 |
electrically responsive cell | 1.22e-13 | 61 |
electrically active cell | 1.22e-13 | 61 |
vascular associated smooth muscle cell | 8.68e-13 | 32 |
mesodermal cell | 1.83e-12 | 121 |
embryonic cell | 1.12e-07 | 250 |
fat cell | 1.23e-07 | 15 |