FFCP PHASE1:Hg19::chr4:37978938..37978963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23216 | |EntrezGene=23216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11578 | |HGNC=11578 | ||
|TSSclassifier=strong | |||
|UniProt=C9JIE2 | |UniProt=C9JIE2 | ||
|association_with_transcript=7bp_to_ENST00000446803_5end | |association_with_transcript=7bp_to_ENST00000446803_5end | ||
|cluster_id=chr4:37978938..37978963,+ | |||
|description=CAGE_peak_4_at_TBC1D1_5end | |description=CAGE_peak_4_at_TBC1D1_5end | ||
|id=chr4:37978938..37978963,+ | |id=chr4:37978938..37978963,+ | ||
|ontology_enrichment_celltype=CL:0002194!3.27e-19!63;CL:0000576!3.27e-19!63;CL:0000040!3.27e-19!63;CL:0000559!3.27e-19!63;CL:0002009!2.10e-17!65;CL:0000557!5.36e-15!71;CL:0000839!1.95e-14!70;CL:0002057!5.07e-14!42;CL:0000766!1.35e-12!76;CL:0000860!4.44e-12!45;CL:0000763!5.49e-11!112;CL:0000049!5.49e-11!112;CL:0002087!2.47e-09!119;CL:0000115!5.43e-09!35;CL:0002078!1.12e-07!44;CL:0000037!3.25e-07!172;CL:0000566!3.25e-07!172;CL:0000738!5.44e-07!140;CL:0002032!7.75e-07!165;CL:0000837!7.75e-07!165;CL:0002139!9.64e-07!24 | |ontology_enrichment_celltype=CL:0002194!3.27e-19!63;CL:0000576!3.27e-19!63;CL:0000040!3.27e-19!63;CL:0000559!3.27e-19!63;CL:0002009!2.10e-17!65;CL:0000557!5.36e-15!71;CL:0000839!1.95e-14!70;CL:0002057!5.07e-14!42;CL:0000766!1.35e-12!76;CL:0000860!4.44e-12!45;CL:0000763!5.49e-11!112;CL:0000049!5.49e-11!112;CL:0002087!2.47e-09!119;CL:0000115!5.43e-09!35;CL:0002078!1.12e-07!44;CL:0000037!3.25e-07!172;CL:0000566!3.25e-07!172;CL:0000738!5.44e-07!140;CL:0002032!7.75e-07!165;CL:0000837!7.75e-07!165;CL:0002139!9.64e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.58e-12;39!CL:0000234;4.58e-12;39!CL:0000860;2.25e-11;33!CL:0002057;2.25e-11;33!CL:0000576;5.30e-10;48!CL:0000115;8.52e-08;36!CL:0000766;5.32e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.19e-22,59;CL:0000576,8.19e-22,59;CL:0000040,8.19e-22,59;CL:0000559,8.19e-22,59;CL:0002009,7.61e-20,61;CL:0000473,2.96e-17,48;CL:0000234,2.96e-17,48;CL:0000557,4.62e-17,67;CL:0000839,1.82e-16,66;CL:0000766,8.50e-15,72;CL:0000860,3.03e-14,42;CL:0002057,3.03e-14,42;CL:0000763,6.54e-13,108;CL:0000049,6.54e-13,108;CL:0002087,3.13e-10,115;CL:0000115,2.02e-09,36;CL:0000037,2.52e-08,168;CL:0000738,5.44e-08,136;CL:0002078,6.22e-08,45;CL:0002032,6.31e-08,161;CL:0000837,6.31e-08,161;CL:0002031,2.20e-07,120;CL:0000988,4.63e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.08e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.31e-14!115;UBERON:0003081!1.23e-13!216;UBERON:0002371!2.04e-12!80;UBERON:0001474!2.53e-11!86;UBERON:0004765!1.88e-10!101;UBERON:0001434!1.88e-10!101;UBERON:0002193!8.00e-10!112;UBERON:0002204!1.67e-09!167;UBERON:0002390!3.08e-08!102;UBERON:0003061!3.08e-08!102 | |ontology_enrichment_uberon=UBERON:0002405!5.31e-14!115;UBERON:0003081!1.23e-13!216;UBERON:0002371!2.04e-12!80;UBERON:0001474!2.53e-11!86;UBERON:0004765!1.88e-10!101;UBERON:0001434!1.88e-10!101;UBERON:0002193!8.00e-10!112;UBERON:0002204!1.67e-09!167;UBERON:0002390!3.08e-08!102;UBERON:0003061!3.08e-08!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,5.17e-17,93;UBERON:0002371,3.84e-14,76;UBERON:0003081,4.97e-13,203;UBERON:0001474,7.53e-13,82;UBERON:0004765,1.23e-11,90;UBERON:0002193,2.67e-11,108;UBERON:0001434,3.88e-11,100;UBERON:0000926,3.82e-10,315;UBERON:0004120,3.82e-10,315;UBERON:0006603,3.82e-10,315;UBERON:0002390,1.32e-09,98;UBERON:0003061,1.32e-09,98;UBERON:0002204,1.59e-09,167 | |||
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| ||
|short_description=p4@TBC1D1 | |short_description=p4@TBC1D1 | ||
}} | }} |
Latest revision as of 15:29, 17 September 2015
Short description: | p4@TBC1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TBC1D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000446803_5end |
EntrezGene: | TBC1D1 |
HGNC: | 11578 |
UniProt: | C9JIE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 8.19e-22 | 59 |
monocyte | 8.19e-22 | 59 |
monoblast | 8.19e-22 | 59 |
promonocyte | 8.19e-22 | 59 |
macrophage dendritic cell progenitor | 7.61e-20 | 61 |
defensive cell | 2.96e-17 | 48 |
phagocyte | 2.96e-17 | 48 |
granulocyte monocyte progenitor cell | 4.62e-17 | 67 |
myeloid lineage restricted progenitor cell | 1.82e-16 | 66 |
myeloid leukocyte | 8.50e-15 | 72 |
classical monocyte | 3.03e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.03e-14 | 42 |
myeloid cell | 6.54e-13 | 108 |
common myeloid progenitor | 6.54e-13 | 108 |
nongranular leukocyte | 3.13e-10 | 115 |
endothelial cell | 2.02e-09 | 36 |
hematopoietic stem cell | 2.52e-08 | 168 |
leukocyte | 5.44e-08 | 136 |
meso-epithelial cell | 6.22e-08 | 45 |
hematopoietic oligopotent progenitor cell | 6.31e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.31e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 2.20e-07 | 120 |
hematopoietic cell | 4.63e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
immune system | 5.17e-17 | 93 |
bone marrow | 3.84e-14 | 76 |
lateral plate mesoderm | 4.97e-13 | 203 |
bone element | 7.53e-13 | 82 |
skeletal element | 1.23e-11 | 90 |
hemolymphoid system | 2.67e-11 | 108 |
skeletal system | 3.88e-11 | 100 |
mesoderm | 3.82e-10 | 315 |
mesoderm-derived structure | 3.82e-10 | 315 |
presumptive mesoderm | 3.82e-10 | 315 |
hematopoietic system | 1.32e-09 | 98 |
blood island | 1.32e-09 | 98 |
musculoskeletal system | 1.59e-09 | 167 |