FFCP PHASE1:Hg19::chr4:37892682..37892757,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23216 | |EntrezGene=23216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11578 | |HGNC=11578 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TI0,B5MCJ2,E9PGH8,B9A6J6,Q7Z6H2,Q8NC59 | |UniProt=Q86TI0,B5MCJ2,E9PGH8,B9A6J6,Q7Z6H2,Q8NC59 | ||
|association_with_transcript=0bp_to_ENST00000261439,ENST00000402522,ENST00000508802,NM_001253912,NM_015173,uc003gtb.2,uc011byd.1_5end | |association_with_transcript=0bp_to_ENST00000261439,ENST00000402522,ENST00000508802,NM_001253912,NM_015173,uc003gtb.2,uc011byd.1_5end | ||
|cluster_id=chr4:37892682..37892757,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_TBC1D1_5end | |description=CAGE_peak_2_at_TBC1D1_5end | ||
|id=chr4:37892682..37892757,+ | |id=chr4:37892682..37892757,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.96e-32!140;CL:0002087!2.03e-29!119;CL:0002031!3.37e-24!124;CL:0000037!7.67e-24!172;CL:0000566!7.67e-24!172;CL:0002032!1.61e-22!165;CL:0000837!1.61e-22!165;CL:0000988!7.60e-22!182;CL:0000838!1.22e-19!52;CL:0000542!2.40e-19!53;CL:0000051!2.40e-19!53;CL:0000766!3.62e-12!76;CL:0000791!1.45e-10!18;CL:0000789!1.45e-10!18;CL:0002420!1.45e-10!18;CL:0002419!1.45e-10!18;CL:0000790!1.45e-10!18;CL:0000945!2.69e-10!24;CL:0000826!2.69e-10!24;CL:0002194!7.02e-10!63;CL:0000576!7.02e-10!63;CL:0000040!7.02e-10!63;CL:0000559!7.02e-10!63;CL:0002057!8.57e-10!42;CL:0002009!1.66e-09!65;CL:0000084!1.96e-09!25;CL:0000827!1.96e-09!25;CL:0000557!7.26e-09!71;CL:0000236!3.33e-08!14;CL:0000860!5.00e-08!45;CL:0000839!1.02e-07!70;CL:0000625!2.42e-07!11;CL:0000763!2.84e-07!112;CL:0000049!2.84e-07!112 | |ontology_enrichment_celltype=CL:0000738!3.96e-32!140;CL:0002087!2.03e-29!119;CL:0002031!3.37e-24!124;CL:0000037!7.67e-24!172;CL:0000566!7.67e-24!172;CL:0002032!1.61e-22!165;CL:0000837!1.61e-22!165;CL:0000988!7.60e-22!182;CL:0000838!1.22e-19!52;CL:0000542!2.40e-19!53;CL:0000051!2.40e-19!53;CL:0000766!3.62e-12!76;CL:0000791!1.45e-10!18;CL:0000789!1.45e-10!18;CL:0002420!1.45e-10!18;CL:0002419!1.45e-10!18;CL:0000790!1.45e-10!18;CL:0000945!2.69e-10!24;CL:0000826!2.69e-10!24;CL:0002194!7.02e-10!63;CL:0000576!7.02e-10!63;CL:0000040!7.02e-10!63;CL:0000559!7.02e-10!63;CL:0002057!8.57e-10!42;CL:0002009!1.66e-09!65;CL:0000084!1.96e-09!25;CL:0000827!1.96e-09!25;CL:0000557!7.26e-09!71;CL:0000236!3.33e-08!14;CL:0000860!5.00e-08!45;CL:0000839!1.02e-07!70;CL:0000625!2.42e-07!11;CL:0000763!2.84e-07!112;CL:0000049!2.84e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000542;4.58e-12;53!CL:0000791;5.72e-11;18!CL:0000789;5.72e-11;18!CL:0002419;5.72e-11;18!CL:0000945;1.00e-10;24!CL:0000084;1.84e-09;25!CL:0002087;2.67e-09;104!CL:0000236;9.48e-09;13!CL:0000625;1.35e-07;11!CL:0000738;1.45e-07;136!CL:0000576;4.94e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.25e-34,136;CL:0002087,2.17e-32,115;CL:0002031,2.15e-26,120;CL:0000037,2.84e-26,168;CL:0002032,5.56e-25,161;CL:0000837,5.56e-25,161;CL:0000988,8.93e-24,177;CL:0000838,5.20e-20,52;CL:0000542,1.04e-19,53;CL:0000051,1.04e-19,53;CL:0000766,1.10e-13,72;CL:0002194,9.46e-12,59;CL:0000576,9.46e-12,59;CL:0000040,9.46e-12,59;CL:0000559,9.46e-12,59;CL:0002009,2.78e-11,61;CL:0000791,5.95e-11,18;CL:0000789,5.95e-11,18;CL:0002420,5.95e-11,18;CL:0002419,5.95e-11,18;CL:0000790,5.95e-11,18;CL:0000945,1.14e-10,24;CL:0000826,1.14e-10,24;CL:0000473,1.66e-10,48;CL:0000234,1.66e-10,48;CL:0000860,3.80e-10,42;CL:0002057,3.80e-10,42;CL:0000557,4.92e-10,67;CL:0000084,2.17e-09,25;CL:0000827,2.17e-09,25;CL:0000839,5.85e-09,66;CL:0000763,1.30e-08,108;CL:0000049,1.30e-08,108;CL:0000236,1.72e-08,14;CL:0000625,1.37e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;4.58e-12;53!CL:0000790;5.72e-11;18!CL:0002057;1.70e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.49e-34!115;UBERON:0002390!1.44e-16!102;UBERON:0003061!1.44e-16!102;UBERON:0002193!6.23e-16!112;UBERON:0000178!2.98e-09!15;UBERON:0000179!2.98e-09!15;UBERON:0000463!2.98e-09!15;UBERON:0001049!6.50e-09!57;UBERON:0005068!6.50e-09!57;UBERON:0006241!6.50e-09!57;UBERON:0007135!6.50e-09!57;UBERON:0002371!4.55e-08!80;UBERON:0003080!5.12e-08!42;UBERON:0002405!5.96e-08!115;UBERON:0002616!6.12e-08!59;UBERON:0001893!6.74e-08!34;UBERON:0002780!8.03e-08!41;UBERON:0001890!8.03e-08!41;UBERON:0006240!8.03e-08!41;UBERON:0001474!1.06e-07!86;UBERON:0002020!1.15e-07!34;UBERON:0003528!1.15e-07!34;UBERON:0002791!1.17e-07!33;UBERON:0001869!1.30e-07!32;UBERON:0001017!3.38e-07!82;UBERON:0005743!8.59e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!9.49e-34!115;UBERON:0002390!1.44e-16!102;UBERON:0003061!1.44e-16!102;UBERON:0002193!6.23e-16!112;UBERON:0000178!2.98e-09!15;UBERON:0000179!2.98e-09!15;UBERON:0000463!2.98e-09!15;UBERON:0001049!6.50e-09!57;UBERON:0005068!6.50e-09!57;UBERON:0006241!6.50e-09!57;UBERON:0007135!6.50e-09!57;UBERON:0002371!4.55e-08!80;UBERON:0003080!5.12e-08!42;UBERON:0002405!5.96e-08!115;UBERON:0002616!6.12e-08!59;UBERON:0001893!6.74e-08!34;UBERON:0002780!8.03e-08!41;UBERON:0001890!8.03e-08!41;UBERON:0006240!8.03e-08!41;UBERON:0001474!1.06e-07!86;UBERON:0002020!1.15e-07!34;UBERON:0003528!1.15e-07!34;UBERON:0002791!1.17e-07!33;UBERON:0001869!1.30e-07!32;UBERON:0001017!3.38e-07!82;UBERON:0005743!8.59e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-09;15!UBERON:0000179;1.50e-09;15!UBERON:0000463;1.50e-09;15!UBERON:0002390;6.34e-09;32!UBERON:0007023;6.98e-09;114!UBERON:0001893;3.40e-07;34!UBERON:0001869;4.08e-07;32!UBERON:0002791;4.80e-07;32!UBERON:0003528;6.72e-07;34!UBERON:0002020;6.72e-07;34 | |||
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| ||
|short_description=p2@TBC1D1 | |short_description=p2@TBC1D1 | ||
}} | }} |
Latest revision as of 15:27, 17 September 2015
Short description: | p2@TBC1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBC1D1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000261439, ENST00000402522, ENST00000508802, NM_001253912, NM_015173, uc003gtb.2, uc011byd.1_5end |
EntrezGene: | TBC1D1 |
HGNC: | 11578 |
UniProt: | Q86TI0B5MCJ2E9PGH8B9A6J6Q7Z6H2Q8NC59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.71e-35 | 114 |
hematopoietic system | 1.48e-18 | 98 |
blood island | 1.48e-18 | 98 |
hemolymphoid system | 1.80e-17 | 108 |
immune system | 4.10e-11 | 93 |
blood | 1.39e-09 | 15 |
haemolymphatic fluid | 1.39e-09 | 15 |
organism substance | 1.39e-09 | 15 |
bone marrow | 2.87e-09 | 76 |
bone element | 5.31e-09 | 82 |
neural tube | 8.89e-09 | 56 |
neural rod | 8.89e-09 | 56 |
future spinal cord | 8.89e-09 | 56 |
neural keel | 8.89e-09 | 56 |
regional part of nervous system | 2.15e-08 | 53 |
regional part of brain | 2.15e-08 | 53 |
telencephalon | 3.60e-08 | 34 |
regional part of forebrain | 4.32e-08 | 41 |
forebrain | 4.32e-08 | 41 |
anterior neural tube | 4.32e-08 | 41 |
future forebrain | 4.32e-08 | 41 |
skeletal element | 4.63e-08 | 90 |
brain grey matter | 6.26e-08 | 34 |
gray matter | 6.26e-08 | 34 |
cerebral hemisphere | 7.11e-08 | 32 |
regional part of telencephalon | 9.81e-08 | 32 |
central nervous system | 4.33e-07 | 81 |