FFCP PHASE1:Hg19::chr4:37892506..37892522,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:37892506..37892522,+ to FFCP PHASE1:Hg19::chr4:37892506..37892522,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23216 | |EntrezGene=23216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11578 | |HGNC=11578 | ||
|TSSclassifier=strong | |||
|UniProt=B9A6J6,Q7Z6H2,Q86TI0,Q8NC59 | |UniProt=B9A6J6,Q7Z6H2,Q86TI0,Q8NC59 | ||
|association_with_transcript=-182bp_to_NM_001253912,NM_015173_5end | |||
|cluster_id=chr4:37892506..37892522,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_8_at_TBC1D1_5end | |||
|id=chr4:37892506..37892522,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.22e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.39e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.59e-44!115;UBERON:0001049!1.65e-27!57;UBERON:0005068!1.65e-27!57;UBERON:0006241!1.65e-27!57;UBERON:0007135!1.65e-27!57;UBERON:0003080!1.92e-22!42;UBERON:0002616!5.07e-22!59;UBERON:0002780!9.59e-22!41;UBERON:0001890!9.59e-22!41;UBERON:0006240!9.59e-22!41;UBERON:0001017!3.15e-20!82;UBERON:0002020!3.34e-20!34;UBERON:0003528!3.34e-20!34;UBERON:0001893!3.36e-20!34;UBERON:0002791!2.28e-19!33;UBERON:0001869!2.45e-19!32;UBERON:0005743!2.60e-19!86;UBERON:0000955!3.50e-19!69;UBERON:0006238!3.50e-19!69;UBERON:0002619!5.75e-18!22;UBERON:0003075!1.29e-17!86;UBERON:0007284!1.29e-17!86;UBERON:0000956!2.04e-16!25;UBERON:0000203!2.04e-16!25;UBERON:0001950!2.65e-16!20;UBERON:0000073!3.28e-16!94;UBERON:0001016!3.28e-16!94;UBERON:0002346!5.74e-16!90;UBERON:0003056!2.46e-13!61;UBERON:0000153!3.87e-10!129;UBERON:0007811!3.87e-10!129;UBERON:0000033!1.24e-09!123;UBERON:0001871!5.68e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.42e-18;22!UBERON:0001950;4.91e-17;20!UBERON:0000956;4.03e-16;25!UBERON:0000203;4.03e-16;25!UBERON:0001869;8.56e-16;32!UBERON:0002791;2.35e-13;32!UBERON:0001893;3.85e-13;34!UBERON:0003528;6.64e-13;34!UBERON:0002020;6.64e-13;34!UBERON:0002780;2.66e-11;41!UBERON:0001890;2.66e-11;41!UBERON:0001872;5.93e-11;5!UBERON:0000073;2.99e-09;53!UBERON:0002616;2.99e-09;53!UBERON:0001017;2.57e-08;75!UBERON:0005090;4.14e-08;2!UBERON:0001630;4.14e-08;2!UBERON:0000955;1.44e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.00e-22,114;UBERON:0002619,2.09e-18,22;UBERON:0001049,3.27e-18,56;UBERON:0005068,3.27e-18,56;UBERON:0006241,3.27e-18,56;UBERON:0007135,3.27e-18,56;UBERON:0000073,2.00e-17,53;UBERON:0002616,2.00e-17,53;UBERON:0001950,7.29e-17,20;UBERON:0001869,1.59e-16,32;UBERON:0000956,5.66e-16,25;UBERON:0000203,5.66e-16,25;UBERON:0000955,1.43e-15,68;UBERON:0006238,1.43e-15,68;UBERON:0003528,2.01e-15,34;UBERON:0002020,2.01e-15,34;UBERON:0001893,2.14e-15,34;UBERON:0001017,2.95e-15,81;UBERON:0002780,3.27e-14,41;UBERON:0001890,3.27e-14,41;UBERON:0003080,3.27e-14,41;UBERON:0006240,3.27e-14,41;UBERON:0002791,3.80e-14,32;UBERON:0001016,3.24e-13,89;UBERON:0003075,2.57e-12,82;UBERON:0007284,2.57e-12,82;UBERON:0010314,1.08e-11,132;UBERON:0002346,1.60e-11,86;UBERON:0001872,8.41e-11,5;UBERON:0010371,1.03e-08,104;UBERON:0003056,1.54e-08,61;UBERON:0005090,3.14e-08,2;UBERON:0001630,3.14e-08,2;UBERON:0011216,2.34e-07,223 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.627713197974014,0.152826811495903,0.246301768349837,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.601633342410425,1.73608696572681,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0.211255286311942,0,0.419317291016752,0.112328631146495,0,0.64290234678832,0,0,0.365328307529268,1.75996244461323,0,2.66852776159066,0,0,0,0.661044872784862,0.954053754535364,1.1384259382189,2.34894875748376,1.52909291250092,0,0.560508562981536,0,0.393419540227666,0.393010762749165,0,0,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.512365278902701,0,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0,0.130979075497713,0,0,0.649094787309367,0.174129737299267,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,1.8720341211139,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0.336255431980582,0.394061520403854,0.646882724578552,1.02674429023799,0,0,0,0.167516265334349,0,0,2.99161459204025,0.414415513436035,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0,2.74514739048685,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0.170453254832202,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0.851692475380653,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,2.98244294329889,0.984685914873589,0.556543525114529,0,0,0.398495976502139,0.552567831062295,0,0.409074730008619,0.246169610922139,0,0.0898683511473268,0.179021174675609,0,0.789147245095469,0,0,1.93866549219044,1.20598527610407,0,0,0,0.724999575434793,0,0.508507300585533,0,0,0,0.173624994933292,0,0.482385754501632,0,2.21158519862449,1.77328571372128,1.53569778007781,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,1.22206028986725,0,0.123563938946503,0,0.404406797884062,1.60515529459758,0.468528891450678,0.729819156862664,0,0,0.394584402849391,1.20990716048664,1.22429104652196,0.063186579628488,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.677942222341597,0.137041924646751,0.397429223405979,0.823040347426423,0.195551382734803,0.0801588202515337,0.85381197895741,0,0,0,0,0,0.372757606696298,0,0,0,0,0,1.20084057741958,0.273810757783986,2.55493176133945,0.429765441419957,0,0.558564802544508,1.3749625440701,0,1.19807400299395,2.14613024068285,2.4548860318606,1.47803639470798,0.360299883542404,0,0,0,0,0,0.0846733320657845,3.97614844904652,0.681017030557878,0,0.275078873194468,0.415440338029185,0,0,0.850493793212345,0,0.157611414598396,0.209818352539992,0,0,0,5.00286728461357,3.31045985182716,0,0,0,0,0,0,0,0.113312091520126,0,0,1.55139547633861,0.39669780522807,0,0,0,0.314408610199332,0,1.9846640872478,0.197611631897944,0.365377795142688,0,0,0,0.306345576763462,0,0.471162288750703,0.886068179966986,0.732157589411779,1.502291168478,1.14681839138014,0.554645257684261,0.434674820589684,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.829550616910385,0.389720617678777,0,0.490696182767533,0.655219697692825,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0.770750701157514,0,0.957803154342908,2.46139637088906,1.26035848110859,1.24483054435592,1.93770774758221,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0.225630985047772,0.20170506870352,2.34454203369928,0,0.163771917510097,0,1.41828927698629,2.34323429584154,1.03343398250592,1.33173201407204,0.546974809018219,0.548257766857182,0.992422356778588,0,0,0.535701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| ||
|short_description=p8@TBC1D1 | |||
}} | }} |
Latest revision as of 15:26, 17 September 2015
Short description: | p8@TBC1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TBC1D1_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -182bp_to_NM_001253912, NM_015173_5end |
EntrezGene: | TBC1D1 |
HGNC: | 11578 |
UniProt: | B9A6J6Q7Z6H2Q86TI0Q8NC59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.00e-22 | 114 |
regional part of cerebral cortex | 2.09e-18 | 22 |
neural tube | 3.27e-18 | 56 |
neural rod | 3.27e-18 | 56 |
future spinal cord | 3.27e-18 | 56 |
neural keel | 3.27e-18 | 56 |
regional part of nervous system | 2.00e-17 | 53 |
regional part of brain | 2.00e-17 | 53 |
neocortex | 7.29e-17 | 20 |
cerebral hemisphere | 1.59e-16 | 32 |
cerebral cortex | 5.66e-16 | 25 |
pallium | 5.66e-16 | 25 |
brain | 1.43e-15 | 68 |
future brain | 1.43e-15 | 68 |
brain grey matter | 2.01e-15 | 34 |
gray matter | 2.01e-15 | 34 |
telencephalon | 2.14e-15 | 34 |
central nervous system | 2.95e-15 | 81 |
regional part of forebrain | 3.27e-14 | 41 |
forebrain | 3.27e-14 | 41 |
anterior neural tube | 3.27e-14 | 41 |
future forebrain | 3.27e-14 | 41 |
regional part of telencephalon | 3.80e-14 | 32 |
nervous system | 3.24e-13 | 89 |
neural plate | 2.57e-12 | 82 |
presumptive neural plate | 2.57e-12 | 82 |
structure with developmental contribution from neural crest | 1.08e-11 | 132 |
neurectoderm | 1.60e-11 | 86 |
parietal lobe | 8.41e-11 | 5 |
ecto-epithelium | 1.03e-08 | 104 |
pre-chordal neural plate | 1.54e-08 | 61 |
muscle structure | 3.14e-08 | 2 |
muscle organ | 3.14e-08 | 2 |
organ system subdivision | 2.34e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.39e-07 | 2 |