FFCP PHASE1:Hg19::chr2:155565815..155565832,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3760 | |EntrezGene=3760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6264 | |HGNC=6264 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000493505_5end | |association_with_transcript=-11bp_to_ENST00000493505_5end | ||
|cluster_id=chr2:155565815..155565832,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_4_at_KCNJ3_5end | |description=CAGE_peak_4_at_KCNJ3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;1.91e-15;2!DOID:4236;1.91e-15;2 | |ontology_enrichment_disease_v019=DOID:154;1.91e-15;2!DOID:4236;1.91e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:154,2.05e-15,2;DOID:4236,2.05e-15,2 | |||
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|short_description=p4@KCNJ3 | |short_description=p4@KCNJ3 | ||
}} | }} |
Latest revision as of 15:19, 17 September 2015
Short description: | p4@KCNJ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KCNJ3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -11bp_to_ENST00000493505_5end |
EntrezGene: | KCNJ3 |
HGNC: | 6264 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.16e-43 | 6 |
rhombic lip | 3.16e-43 | 6 |
segmental subdivision of hindbrain | 3.07e-38 | 12 |
hindbrain | 3.07e-38 | 12 |
presumptive hindbrain | 3.07e-38 | 12 |
segmental subdivision of nervous system | 2.34e-35 | 13 |
posterior neural tube | 9.68e-31 | 15 |
chordal neural plate | 9.68e-31 | 15 |
regional part of metencephalon | 3.84e-29 | 9 |
metencephalon | 3.84e-29 | 9 |
future metencephalon | 3.84e-29 | 9 |
medulla oblongata | 8.99e-11 | 3 |
myelencephalon | 8.99e-11 | 3 |
future myelencephalon | 8.99e-11 | 3 |
brain | 1.74e-10 | 68 |
future brain | 1.74e-10 | 68 |
regional part of nervous system | 6.15e-09 | 53 |
regional part of brain | 6.15e-09 | 53 |
central nervous system | 6.90e-09 | 81 |
neural tube | 1.72e-08 | 56 |
neural rod | 1.72e-08 | 56 |
future spinal cord | 1.72e-08 | 56 |
neural keel | 1.72e-08 | 56 |
nervous system | 4.82e-08 | 89 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.05e-15 | 2 |
carcinosarcoma | 2.05e-15 | 2 |