FFCP PHASE1:Hg19::chr11:32112568..32112575,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5954 | |EntrezGene=5954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9934 | |HGNC=9934 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNT6 | |UniProt=E9PNT6 | ||
|association_with_transcript=-45bp_to_ENST00000400416_5end | |association_with_transcript=-45bp_to_ENST00000400416_5end | ||
|cluster_id=chr11:32112568..32112575,+ | |||
|coexpression_cluster_id=C3142 | |coexpression_cluster_id=C3142 | ||
|description=CAGE_peak_7_at_RCN1_5end | |description=CAGE_peak_7_at_RCN1_5end | ||
|id=chr11:32112568..32112575,+ | |id=chr11:32112568..32112575,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.95e-32!180;CL:0000393!2.27e-14!60;CL:0000211!2.27e-14!60;CL:0000222!2.44e-14!119;CL:0000187!5.83e-14!54;CL:0000680!6.39e-14!57;CL:0000056!6.39e-14!57;CL:0000355!6.39e-14!57;CL:0000183!6.68e-14!59;CL:0000057!7.98e-13!75;CL:0002321!1.57e-12!248;CL:0000220!3.61e-12!246;CL:0000192!1.03e-09!42;CL:0000514!1.03e-09!42;CL:0000548!1.15e-08!679;CL:0000004!1.15e-08!679;CL:0000255!1.15e-08!679;CL:0000012!4.05e-08!682;CL:0000144!1.48e-07!625;CL:0000359!3.90e-07!32;CL:0000133!5.18e-07!59 | |ontology_enrichment_celltype=CL:0000055!2.95e-32!180;CL:0000393!2.27e-14!60;CL:0000211!2.27e-14!60;CL:0000222!2.44e-14!119;CL:0000187!5.83e-14!54;CL:0000680!6.39e-14!57;CL:0000056!6.39e-14!57;CL:0000355!6.39e-14!57;CL:0000183!6.68e-14!59;CL:0000057!7.98e-13!75;CL:0002321!1.57e-12!248;CL:0000220!3.61e-12!246;CL:0000192!1.03e-09!42;CL:0000514!1.03e-09!42;CL:0000548!1.15e-08!679;CL:0000004!1.15e-08!679;CL:0000255!1.15e-08!679;CL:0000012!4.05e-08!682;CL:0000144!1.48e-07!625;CL:0000359!3.90e-07!32;CL:0000133!5.18e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000187;3.57e-10;55!CL:0000393;1.01e-08;61!CL:0000211;1.01e-08;61!CL:0000359;2.36e-08;32!CL:0000192;3.88e-08;43!CL:0000134;2.94e-07;55!CL:0000723;8.53e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,3.74e-17,55;CL:0000393,3.37e-16,61;CL:0000211,3.37e-16,61;CL:0000680,3.51e-16,58;CL:0000056,3.51e-16,58;CL:0000355,3.51e-16,58;CL:0000222,8.02e-15,121;CL:0000057,2.95e-14,76;CL:0000192,4.64e-12,43;CL:0000514,4.64e-12,43;CL:0002321,2.24e-10,250;CL:0000359,2.08e-09,32;CL:0000048,8.98e-09,427;CL:0000034,1.05e-08,441;CL:0000723,2.51e-08,433;CL:0000133,4.03e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000355;2.02e-09;58!CL:0000514;3.88e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;9.22e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.67e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.54e-14!83;UBERON:0002329!5.54e-14!83;UBERON:0003077!5.54e-14!83;UBERON:0003059!5.54e-14!83;UBERON:0007282!5.54e-14!83;UBERON:0009618!5.54e-14!83;UBERON:0007285!5.54e-14!83;UBERON:0004290!6.84e-13!70;UBERON:0002049!1.12e-12!79;UBERON:0007798!1.12e-12!79;UBERON:0000486!2.20e-12!82;UBERON:0001134!3.02e-12!61;UBERON:0002036!3.02e-12!61;UBERON:0003082!3.02e-12!61;UBERON:0002385!1.68e-11!63;UBERON:0001015!1.68e-11!63;UBERON:0000383!1.68e-11!63;UBERON:0000490!1.52e-09!138;UBERON:0005256!3.24e-09!143;UBERON:0000475!1.12e-08!365;UBERON:0000055!3.25e-08!69;UBERON:0004535!4.38e-08!110;UBERON:0000119!5.29e-08!312;UBERON:0000483!8.19e-08!309;UBERON:0002200!1.47e-07!11;UBERON:0006876!1.47e-07!11;UBERON:0001009!2.93e-07!113;UBERON:0002100!5.74e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!5.54e-14!83;UBERON:0002329!5.54e-14!83;UBERON:0003077!5.54e-14!83;UBERON:0003059!5.54e-14!83;UBERON:0007282!5.54e-14!83;UBERON:0009618!5.54e-14!83;UBERON:0007285!5.54e-14!83;UBERON:0004290!6.84e-13!70;UBERON:0002049!1.12e-12!79;UBERON:0007798!1.12e-12!79;UBERON:0000486!2.20e-12!82;UBERON:0001134!3.02e-12!61;UBERON:0002036!3.02e-12!61;UBERON:0003082!3.02e-12!61;UBERON:0002385!1.68e-11!63;UBERON:0001015!1.68e-11!63;UBERON:0000383!1.68e-11!63;UBERON:0000490!1.52e-09!138;UBERON:0005256!3.24e-09!143;UBERON:0000475!1.12e-08!365;UBERON:0000055!3.25e-08!69;UBERON:0004535!4.38e-08!110;UBERON:0000119!5.29e-08!312;UBERON:0000483!8.19e-08!309;UBERON:0002200!1.47e-07!11;UBERON:0006876!1.47e-07!11;UBERON:0001009!2.93e-07!113;UBERON:0002100!5.74e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.22e-09;11!UBERON:0002049;2.34e-08;75!UBERON:0007798;2.34e-08;75 | |||
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| ||
|short_description=p7@RCN1 | |short_description=p7@RCN1 | ||
}} | }} |
Latest revision as of 15:19, 17 September 2015
Short description: | p7@RCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RCN1_5end |
Coexpression cluster: | C3142_Smooth_mesenchymal_small_Sertoli_Lens_Fibroblast_anaplastic |
Association with transcript: | -45bp_to_ENST00000400416_5end |
EntrezGene: | RCN1 |
HGNC: | 9934 |
UniProt: | E9PNT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 3.74e-17 | 55 |
electrically responsive cell | 3.37e-16 | 61 |
electrically active cell | 3.37e-16 | 61 |
muscle precursor cell | 3.51e-16 | 58 |
myoblast | 3.51e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.51e-16 | 58 |
mesodermal cell | 8.02e-15 | 121 |
fibroblast | 2.95e-14 | 76 |
smooth muscle cell | 4.64e-12 | 43 |
smooth muscle myoblast | 4.64e-12 | 43 |
embryonic cell | 2.24e-10 | 250 |
vascular associated smooth muscle cell | 2.08e-09 | 32 |
multi fate stem cell | 8.98e-09 | 427 |
stem cell | 1.05e-08 | 441 |
somatic stem cell | 2.51e-08 | 433 |
neurectodermal cell | 4.03e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.20e-16 | 78 |
vascular system | 2.20e-16 | 78 |
dense mesenchyme tissue | 2.22e-15 | 73 |
somite | 3.45e-15 | 71 |
presomitic mesoderm | 3.45e-15 | 71 |
presumptive segmental plate | 3.45e-15 | 71 |
dermomyotome | 3.45e-15 | 71 |
trunk paraxial mesoderm | 3.45e-15 | 71 |
paraxial mesoderm | 1.03e-14 | 72 |
presumptive paraxial mesoderm | 1.03e-14 | 72 |
skeletal muscle tissue | 1.16e-14 | 62 |
striated muscle tissue | 1.16e-14 | 62 |
myotome | 1.16e-14 | 62 |
muscle tissue | 1.14e-13 | 64 |
musculature | 1.14e-13 | 64 |
musculature of body | 1.14e-13 | 64 |
multilaminar epithelium | 3.04e-13 | 83 |
cardiovascular system | 3.33e-13 | 109 |
epithelial vesicle | 6.06e-13 | 78 |
circulatory system | 2.95e-12 | 112 |
unilaminar epithelium | 6.17e-11 | 148 |
vessel | 5.18e-10 | 68 |
vasculature of organ | 1.80e-09 | 11 |
trunk mesenchyme | 1.65e-08 | 122 |
splanchnic layer of lateral plate mesoderm | 2.88e-08 | 83 |
mesenchyme | 3.23e-08 | 160 |
entire embryonic mesenchyme | 3.23e-08 | 160 |
epithelial tube open at both ends | 5.63e-08 | 59 |
blood vessel | 5.63e-08 | 59 |
blood vasculature | 5.63e-08 | 59 |
vascular cord | 5.63e-08 | 59 |
artery | 7.15e-08 | 42 |
arterial blood vessel | 7.15e-08 | 42 |
arterial system | 7.15e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.67e-08 | 14 |