FFCP PHASE1:Hg19::chr12:15942503..15942514,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2059 | |EntrezGene=2059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3420 | |HGNC=3420 | ||
|TSSclassifier=strong | |||
|UniProt=Q12929,F5H819,B4E3T6 | |UniProt=Q12929,F5H819,B4E3T6 | ||
|association_with_transcript=0bp_to_ENST00000281172,ENST00000543223,NM_004447,uc001rdb.2,uc009zig.2_5end | |association_with_transcript=0bp_to_ENST00000281172,ENST00000543223,NM_004447,uc001rdb.2,uc009zig.2_5end | ||
|cluster_id=chr12:15942503..15942514,- | |||
|description=CAGE_peak_4_at_EPS8_5end | |description=CAGE_peak_4_at_EPS8_5end | ||
|id=chr12:15942503..15942514,- | |id=chr12:15942503..15942514,- | ||
|ontology_enrichment_celltype=CL:0000055!7.27e-10!180;CL:0000136!8.61e-09!15;CL:0000057!2.96e-07!75 | |ontology_enrichment_celltype=CL:0000055!7.27e-10!180;CL:0000136!8.61e-09!15;CL:0000057!2.96e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.31e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.75e-11,15;CL:0002570,8.56e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!7.34e-17!347;UBERON:0000475!1.82e-16!365;UBERON:0007023!3.66e-11!115;UBERON:0002100!1.93e-10!216;UBERON:0003104!3.48e-09!238;UBERON:0009142!3.48e-09!238;UBERON:0000468!6.12e-09!659;UBERON:0000119!7.28e-09!312;UBERON:0007100!1.91e-08!27;UBERON:0000483!5.51e-08!309;UBERON:0005256!7.57e-08!143;UBERON:0000477!9.60e-08!286;UBERON:0000948!3.77e-07!24;UBERON:0005498!3.77e-07!24;UBERON:0004140!3.77e-07!24;UBERON:0009881!3.77e-07!24;UBERON:0004141!3.77e-07!24;UBERON:0003084!3.77e-07!24;UBERON:0007005!3.77e-07!24;UBERON:0004139!3.77e-07!24;UBERON:0004291!3.77e-07!24;UBERON:0002385!4.76e-07!63;UBERON:0001015!4.76e-07!63;UBERON:0000383!4.76e-07!63;UBERON:0000062!8.03e-07!511 | |ontology_enrichment_uberon=UBERON:0000481!7.34e-17!347;UBERON:0000475!1.82e-16!365;UBERON:0007023!3.66e-11!115;UBERON:0002100!1.93e-10!216;UBERON:0003104!3.48e-09!238;UBERON:0009142!3.48e-09!238;UBERON:0000468!6.12e-09!659;UBERON:0000119!7.28e-09!312;UBERON:0007100!1.91e-08!27;UBERON:0000483!5.51e-08!309;UBERON:0005256!7.57e-08!143;UBERON:0000477!9.60e-08!286;UBERON:0000948!3.77e-07!24;UBERON:0005498!3.77e-07!24;UBERON:0004140!3.77e-07!24;UBERON:0009881!3.77e-07!24;UBERON:0004141!3.77e-07!24;UBERON:0003084!3.77e-07!24;UBERON:0007005!3.77e-07!24;UBERON:0004139!3.77e-07!24;UBERON:0004291!3.77e-07!24;UBERON:0002385!4.76e-07!63;UBERON:0001015!4.76e-07!63;UBERON:0000383!4.76e-07!63;UBERON:0000062!8.03e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.21e-10;16!UBERON:0002036;4.21e-10;16!UBERON:0001013;1.87e-08;14!UBERON:0007100;6.23e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,3.54e-12,160;UBERON:0009142,3.54e-12,160;UBERON:0002100,7.92e-11,199;UBERON:0005256,1.89e-10,122;UBERON:0007100,3.01e-09,27;UBERON:0001013,1.15e-08,14;UBERON:0002385,6.25e-08,64;UBERON:0001015,6.25e-08,64;UBERON:0000383,6.25e-08,64;UBERON:0000948,1.32e-07,24;UBERON:0005498,1.32e-07,24;UBERON:0004140,1.32e-07,24;UBERON:0009881,1.32e-07,24;UBERON:0004141,1.32e-07,24;UBERON:0003084,1.32e-07,24;UBERON:0007005,1.32e-07,24;UBERON:0004139,1.32e-07,24;UBERON:0004291,1.32e-07,24;UBERON:0003077,1.78e-07,72;UBERON:0007285,1.78e-07,72;UBERON:0002329,3.18e-07,71;UBERON:0003059,3.18e-07,71;UBERON:0007282,3.18e-07,71;UBERON:0004290,3.18e-07,71;UBERON:0009618,3.18e-07,71;UBERON:0007524,3.24e-07,73;UBERON:0001134,4.84e-07,62;UBERON:0002036,4.84e-07,62;UBERON:0003082,4.84e-07,62;UBERON:0007023,5.76e-07,114 | |||
|phase1_expression=10.5373459976923,2.99740733447376,4.36958652697511,9.00659685178174,2.23480547213644,2.61701557230111,5.06599756336621,5.68547886084148,1.30592814099919,0,0,0.436882744260345,0.263766978228454,2.10402800032079,3.64537113300707,0,0,0,0,0.61560529038394,1.22400414746552,0.313454721478088,0.85870796139317,1.23186982565596,2.76193807108566,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9426179682566,5.36560687762909,3.83587685530591,1.0843174571537,5.0133791063589,2.31754430337318,1.5905718941022,0.973269740605272,0.850813354476611,0,0.614843499851882,1.11332214173056,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0.675668882899933,0,0,0,0,0,0,1.49091585508596,1.64619665163954,0.926864265692532,2.58152958673932,2.83734705758686,3.92474320099615,0,0,17.1166069469871,7.27437629176316,11.9327189272825,24.8226181337687,50.7034813542399,1.40592859100278,0.624320153660641,1.1409436430889,2.98897361103602,1.76151747965647,1.94247533241758,1.54495887372473,0.816616685019573,0,0.929932030581889,0,0.494533858557114,3.64064544775211,2.87447256726495,0.336672227908132,0.500474079487857,1.93944880838928,0,0,0.901428353439581,5.67160915800105,1.61450672119976,0,0.211931901159562,1.20036438433761,0.412210116953756,5.66809188100384,2.41951913231067,3.71307930930786,3.31285817548075,2.77677151668526,0.368199594569197,0.323292113637624,1.42003837006646,0.604512589365842,3.22165125389926,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,2.78620756819187,2.16563844500876,0.236613600079688,0.505754070234305,0.241011029883482,0.220587945464788,0,0.237270619111097,0,0.196221465125346,0,0,0,2.4694440679884,4.41026134156626,1.26755034821831,0.982827216677626,2.36315962672562,0,0.737930631258681,1.3725424823882,0,0,0,0,0.977424915930974,0,1.44331342025273,0,2.11335649624479,0.144366447761074,0,0,2.37061319387782,0.858486162094873,0.246217006087397,0.234004265139238,0,0,0,0,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,0.205654985406647,0,0,12.3344192779897,9.59112151433216,14.4476423067272,0.258543431515556,7.15312891703765,5.071816515336,4.5209479819428,5.2003718455683,4.37252536245642,5.67396528093113,4.26275486425759,25.0211488901758,5.42621605391443,1.64648067356154,1.95441710576241,17.7695974371273,2.37585561880029,0,0,0,0,0,0,8.14724508671381,2.29723871668228,2.85273810081437,3.4747513600219,8.21905290201534,1.96967059563885,0,0,0,0,0.254094624222463,2.60279707715243,0.773288812777695,0,0,0,0,0,11.5330002215991,10.0034104211935,5.15403545029498,0.623912584592421,0.535286966391485,0.473107245101804,0.702848489956279,1.50473049863859,0,1.03473071292505,3.32112799267718,2.21243002250044,0.60818530127658,3.52442083432933,6.51972505240626,0,0,0.106727557803444,0,0,0,3.96972492510043,2.30192959932094,3.36792113319688,1.53766979106841,0.511707249066704,0.804269605718038,0,2.15893571323718,2.30830242907065,2.05317890034523,0,4.29978400301849,0.120859449591622,0,0.0920809889358963,2.18147451512753,3.64182336013434,1.44236856455367,0.451199612907412,0.15403067420883,0.784349769176855,0,0,0,0,1.29549549661284,0,1.89662506280697,0,0.254876273045038,0,0,0,0,0,0,0.976135183992909,1.03041011647722,0,0.082509499920588,0,0,0,1.64340221096607,4.77550713055398,5.67963596486679,2.34322173223702,4.18938954986267,2.32026710262766,3.23861184181183,3.82837753280971,0.165284915360978,0,0,0.2023155617111,0,0.62962469366128,0,0.616067160352178,0.532306030317022,0,0,0.572499546967965,13.7698596663077,5.37845022021834,3.43134349062885,0,2.99557291623744,1.59101623962968,0,1.43897966066652,1.37268514868027,2.47406044925942,0.808729926293264,0,0.421258456238981,2.43816869544795,0,0,7.37099521603123,1.83827061539827,2.26016233240486,1.65409603063837,0.66343897524122,0,1.15755106853338,0.655894752046633,0.405820753925408,0.30982349809975,1.40847801266121,1.86434757865267,1.08073945114433,0.35667105148125,4.25713276884717,1.05553817648832,0.658589785919804,1.89736586882858,5.24902080367474,0.0962221127255121,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,1.23087398947712,0,0,0,7.29848107592057,5.56731081233197,0,0,0,0,0.890894042497916,0,0.994147647766298,0.422008249231538,0.111308705022906,0,0.211125408127993,1.59398390600856,1.38141957765574,0,0.920418142519393,0.246169610922139,0.622079175323615,6.20091622916555,5.54965641494388,0,5.12945709312055,0,14.4478087188028,0,0.649376687132959,0,2.3438498497671,1.04951999995435,2.17499872630438,0.227586896570999,1.27126825146383,0,0,0,0,3.54296554325536,0.844175070377856,0,0.221158519862449,1.77328571372128,2.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| ||
|short_description=p4@EPS8 | |short_description=p4@EPS8 | ||
}} | }} |
Latest revision as of 15:19, 17 September 2015
Short description: | p4@EPS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EPS8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000281172, ENST00000543223, NM_004447, uc001rdb.2, uc009zig.2_5end |
EntrezGene: | EPS8 |
HGNC: | 3420 |
UniProt: | Q12929F5H819B4E3T6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.75e-11 | 15 |
mesenchymal stem cell of adipose | 8.56e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 3.54e-12 | 160 |
entire embryonic mesenchyme | 3.54e-12 | 160 |
trunk | 7.92e-11 | 199 |
trunk mesenchyme | 1.89e-10 | 122 |
primary circulatory organ | 3.01e-09 | 27 |
adipose tissue | 1.15e-08 | 14 |
muscle tissue | 6.25e-08 | 64 |
musculature | 6.25e-08 | 64 |
musculature of body | 6.25e-08 | 64 |
heart | 1.32e-07 | 24 |
primitive heart tube | 1.32e-07 | 24 |
primary heart field | 1.32e-07 | 24 |
anterior lateral plate mesoderm | 1.32e-07 | 24 |
heart tube | 1.32e-07 | 24 |
heart primordium | 1.32e-07 | 24 |
cardiac mesoderm | 1.32e-07 | 24 |
cardiogenic plate | 1.32e-07 | 24 |
heart rudiment | 1.32e-07 | 24 |
paraxial mesoderm | 1.78e-07 | 72 |
presumptive paraxial mesoderm | 1.78e-07 | 72 |
somite | 3.18e-07 | 71 |
presomitic mesoderm | 3.18e-07 | 71 |
presumptive segmental plate | 3.18e-07 | 71 |
dermomyotome | 3.18e-07 | 71 |
trunk paraxial mesoderm | 3.18e-07 | 71 |
dense mesenchyme tissue | 3.24e-07 | 73 |
skeletal muscle tissue | 4.84e-07 | 62 |
striated muscle tissue | 4.84e-07 | 62 |
myotome | 4.84e-07 | 62 |
adult organism | 5.76e-07 | 114 |