FFCP PHASE1:Hg19::chr13:48877955..48878026,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9884 | |||
|TSSclassifier=strong | |||
|UniProt=P06400,Q92728 | |||
|association_with_transcript=44bp_to_ENST00000267163,ENST00000467505_5end | |||
|cluster_id=chr13:48877955..48878026,+ | |||
|description=CAGE_peak_1_at_RB1_5end | |||
|id=chr13:48877955..48878026,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.63e-54!172;CL:0000566!5.63e-54!172;CL:0002032!2.42e-51!165;CL:0000837!2.42e-51!165;CL:0000988!2.20e-50!182;CL:0000738!9.67e-47!140;CL:0002031!9.35e-42!124;CL:0002087!4.20e-40!119;CL:0000763!2.29e-35!112;CL:0000049!2.29e-35!112;CL:0000766!1.10e-27!76;CL:0000557!4.80e-27!71;CL:0000839!5.11e-27!70;CL:0002009!9.14e-26!65;CL:0000860!1.89e-25!45;CL:0002194!5.22e-25!63;CL:0000576!5.22e-25!63;CL:0000040!5.22e-25!63;CL:0000559!5.22e-25!63;CL:0002057!8.43e-25!42;CL:0000134!1.41e-17!358;CL:0002320!1.90e-16!365;CL:0000219!1.57e-15!390;CL:0000542!9.77e-14!53;CL:0000051!9.77e-14!53;CL:0000838!1.80e-13!52;CL:0000945!8.55e-12!24;CL:0000826!8.55e-12!24;CL:0000048!2.90e-09!430;CL:0000236!3.59e-09!14;CL:0000723!4.16e-09!436;CL:0000034!5.80e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.93e-19;33!CL:0002057;9.93e-19;33!CL:0000576;3.01e-17;48!CL:0000473;2.93e-16;39!CL:0000234;2.93e-16;39!CL:0000766;5.48e-13;69!CL:0002087;1.99e-12;104!CL:0000945;7.40e-12;24!CL:0000738;2.43e-11;136!CL:0000763;1.20e-10;100!CL:0000988;2.95e-09;177!CL:0000236;7.20e-09;13!CL:0000542;1.34e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.85e-53,168;CL:0002032,2.38e-50,161;CL:0000837,2.38e-50,161;CL:0000988,6.60e-50,177;CL:0000738,7.85e-46,136;CL:0002031,6.73e-41,120;CL:0002087,2.92e-39,115;CL:0000763,1.55e-34,108;CL:0000049,1.55e-34,108;CL:0000766,5.52e-27,72;CL:0000557,2.26e-26,67;CL:0000839,2.37e-26,66;CL:0002009,4.01e-25,61;CL:0000473,5.99e-25,48;CL:0000234,5.99e-25,48;CL:0000860,8.43e-25,42;CL:0002057,8.43e-25,42;CL:0002194,2.26e-24,59;CL:0000576,2.26e-24,59;CL:0000040,2.26e-24,59;CL:0000559,2.26e-24,59;CL:0000134,5.06e-17,354;CL:0002320,6.59e-16,361;CL:0000219,5.38e-15,386;CL:0000542,9.77e-14,53;CL:0000051,9.77e-14,53;CL:0000838,1.80e-13,52;CL:0000945,8.55e-12,24;CL:0000826,8.55e-12,24;CL:0000236,3.59e-09,14;CL:0000048,6.01e-09,427;CL:0000723,8.58e-09,433;CL:0000034,1.14e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.23e-18;42!CL:0000049;2.23e-10;108!CL:0000051;1.34e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!1.63e-09!51;DOID:0060083!1.63e-09!51;DOID:1240!6.68e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.71e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.63e-09,51;DOID:0060083,1.63e-09,51;DOID:1240,6.68e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.46e-28!102;UBERON:0003061!7.46e-28!102;UBERON:0002193!2.39e-26!112;UBERON:0001474!1.09e-23!86;UBERON:0002371!1.11e-23!80;UBERON:0004765!4.33e-21!101;UBERON:0001434!4.33e-21!101;UBERON:0002384!2.31e-17!375;UBERON:0002405!8.34e-17!115;UBERON:0002204!5.13e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.86e-27,98;UBERON:0003061,4.86e-27,98;UBERON:0002193,1.64e-25,108;UBERON:0002371,6.31e-23,76;UBERON:0001474,6.48e-23,82;UBERON:0002405,2.39e-22,93;UBERON:0004765,3.20e-20,90;UBERON:0001434,3.89e-19,100;UBERON:0002384,8.37e-17,371;UBERON:0002204,3.85e-07,167 | |||
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| |||
|short_description=p1@RB1 | |||
}} |
Latest revision as of 15:15, 17 September 2015
Short description: | p1@RB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000267163, ENST00000467505_5end |
EntrezGene: | RB1 |
HGNC: | 9884 |
UniProt: | P06400Q92728 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.86e-27 | 98 |
blood island | 4.86e-27 | 98 |
hemolymphoid system | 1.64e-25 | 108 |
bone marrow | 6.31e-23 | 76 |
bone element | 6.48e-23 | 82 |
immune system | 2.39e-22 | 93 |
skeletal element | 3.20e-20 | 90 |
skeletal system | 3.89e-19 | 100 |
connective tissue | 8.37e-17 | 371 |
musculoskeletal system | 3.85e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.63e-09 | 51 |
immune system cancer | 1.63e-09 | 51 |
leukemia | 6.68e-09 | 39 |