FFCP PHASE1:Hg19::chr15:42186200..42186205,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51332 | |EntrezGene=51332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15680 | |HGNC=15680 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRC6 | |UniProt=Q9NRC6 | ||
|association_with_transcript=69bp_to_ENST00000320955,NM_016642,uc001zos.2_5end | |association_with_transcript=69bp_to_ENST00000320955,NM_016642,uc001zos.2_5end | ||
|cluster_id=chr15:42186200..42186205,- | |||
|coexpression_cluster_id=C164 | |coexpression_cluster_id=C164 | ||
|description=CAGE_peak_3_at_SPTBN5_5end | |description=CAGE_peak_3_at_SPTBN5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.39e-66;3!CL:0002251;2.29e-11;20 | |ontology_enrichment_celltype_v019=CL:0002178;2.39e-66;3!CL:0002251;2.29e-11;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.39e-66,3;CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3493!1.17e-31!2;DOID:3111!8.86e-17!1;DOID:3603!8.86e-17!1;DOID:299!3.31e-10!25;DOID:4929!3.71e-09!2 | |ontology_enrichment_disease=DOID:3493!1.17e-31!2;DOID:3111!8.86e-17!1;DOID:3603!8.86e-17!1;DOID:299!3.31e-10!25;DOID:4929!3.71e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.55e-98;2!DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |ontology_enrichment_disease_v019=DOID:3493;1.55e-98;2!DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.55e-98,2;DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004913!5.53e-17!1;UBERON:0003703!5.53e-17!1;UBERON:0001174!5.53e-17!1;UBERON:0004914!5.53e-17!1;UBERON:0002363!3.07e-16!1;UBERON:0007647!3.07e-16!1;UBERON:0010115!3.07e-16!1;UBERON:0002148!5.94e-09!2;UBERON:0009662!5.94e-09!2;UBERON:0003127!7.49e-09!2;UBERON:0002360!8.74e-09!2;UBERON:0000094!8.74e-09!2;UBERON:0007645!8.74e-09!2;UBERON:0002298!1.47e-08!8 | |ontology_enrichment_uberon=UBERON:0004913!5.53e-17!1;UBERON:0003703!5.53e-17!1;UBERON:0001174!5.53e-17!1;UBERON:0004914!5.53e-17!1;UBERON:0002363!3.07e-16!1;UBERON:0007647!3.07e-16!1;UBERON:0010115!3.07e-16!1;UBERON:0002148!5.94e-09!2;UBERON:0009662!5.94e-09!2;UBERON:0003127!7.49e-09!2;UBERON:0002360!8.74e-09!2;UBERON:0000094!8.74e-09!2;UBERON:0007645!8.74e-09!2;UBERON:0002298!1.47e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.48e-40;5!UBERON:0010039;1.48e-40;5!UBERON:0001041;1.43e-15;14!UBERON:0005409;4.42e-10;22!UBERON:0004921;2.32e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0000945;1.48e-40;5!UBERON:0010039;1.48e-40;5!UBERON:0001041;1.43e-15;14!UBERON:0005409;4.42e-10;22!UBERON:0004921;2.32e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0005409,4.34e-09,25 | |||
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|short_description=p3@SPTBN5 | |short_description=p3@SPTBN5 | ||
}} | }} |
Latest revision as of 15:15, 17 September 2015
Short description: | p3@SPTBN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPTBN5_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 69bp_to_ENST00000320955, NM_016642, uc001zos.2_5end |
EntrezGene: | SPTBN5 |
HGNC: | 15680 |
UniProt: | Q9NRC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.39e-66 | 3 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.55e-98 | 2 |
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |