FFCP PHASE1:Hg19::chr8:24151557..24151590,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10863 | |EntrezGene=10863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=206 | |HGNC=206 | ||
|TSSclassifier=strong | |||
|UniProt=E7EMU1,E5RGY1,E5RJQ1,B4DDY3,Q9UKQ2 | |UniProt=E7EMU1,E5RGY1,E5RJQ1,B4DDY3,Q9UKQ2 | ||
|association_with_transcript=0bp_to_ENST00000397649,ENST00000520448,ENST00000523379,ENST00000540823,NM_014265,NM_021777,uc003xdx.2,uc003xdy.2,uc011kzz.1,uc011laa.1_5end | |association_with_transcript=0bp_to_ENST00000397649,ENST00000520448,ENST00000523379,ENST00000540823,NM_014265,NM_021777,uc003xdx.2,uc003xdy.2,uc011kzz.1,uc011laa.1_5end | ||
|cluster_id=chr8:24151557..24151590,+ | |||
|coexpression_cluster_id=C4745 | |||
|description=CAGE_peak_1_at_ADAM28_5end | |description=CAGE_peak_1_at_ADAM28_5end | ||
|id=chr8:24151557..24151590,+ | |id=chr8:24151557..24151590,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.20e-26!172;CL:0000566!3.20e-26!172;CL:0000738!1.51e-24!140;CL:0002032!3.24e-24!165;CL:0000837!3.24e-24!165;CL:0000763!1.00e-22!112;CL:0000049!1.00e-22!112;CL:0000988!4.27e-22!182;CL:0002057!2.94e-20!42;CL:0000766!6.89e-20!76;CL:0002009!7.55e-20!65;CL:0002087!1.24e-19!119;CL:0002194!1.57e-18!63;CL:0000576!1.57e-18!63;CL:0000040!1.57e-18!63;CL:0000559!1.57e-18!63;CL:0000557!8.70e-18!71;CL:0002031!1.15e-17!124;CL:0000860!1.38e-17!45;CL:0000839!2.94e-16!70;CL:0000236!6.09e-10!14 | |ontology_enrichment_celltype=CL:0000037!3.20e-26!172;CL:0000566!3.20e-26!172;CL:0000738!1.51e-24!140;CL:0002032!3.24e-24!165;CL:0000837!3.24e-24!165;CL:0000763!1.00e-22!112;CL:0000049!1.00e-22!112;CL:0000988!4.27e-22!182;CL:0002057!2.94e-20!42;CL:0000766!6.89e-20!76;CL:0002009!7.55e-20!65;CL:0002087!1.24e-19!119;CL:0002194!1.57e-18!63;CL:0000576!1.57e-18!63;CL:0000040!1.57e-18!63;CL:0000559!1.57e-18!63;CL:0000557!8.70e-18!71;CL:0002031!1.15e-17!124;CL:0000860!1.38e-17!45;CL:0000839!2.94e-16!70;CL:0000236!6.09e-10!14 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.04e-21;39!CL:0000234;3.04e-21;39!CL:0000860;8.68e-21;33!CL:0002057;8.68e-21;33!CL:0000576;1.76e-14;48!CL:0000236;1.14e-11;13!CL:0000766;3.47e-11;69!CL:0000763;1.47e-08;100!CL:0000738;2.65e-07;136!CL:0002087;2.90e-07;104!CL:0000945;5.56e-07;24!CL:0000094;7.65e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.31e-28,168;CL:0000738,2.43e-27,136;CL:0000473,4.38e-26,48;CL:0000234,4.38e-26,48;CL:0000763,8.22e-26,108;CL:0000049,8.22e-26,108;CL:0002032,2.45e-25,161;CL:0000837,2.45e-25,161;CL:0000988,1.24e-24,177;CL:0000766,2.84e-24,72;CL:0002009,4.31e-24,61;CL:0002194,2.04e-22,59;CL:0000576,2.04e-22,59;CL:0000040,2.04e-22,59;CL:0000559,2.04e-22,59;CL:0000557,1.29e-21,67;CL:0000860,2.10e-21,42;CL:0002057,2.10e-21,42;CL:0002087,4.97e-21,115;CL:0000839,5.87e-19,66;CL:0002031,2.31e-18,120;CL:0000236,2.24e-12,14;CL:0000945,5.65e-07,24;CL:0000826,5.65e-07,24;CL:0000094,7.26e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.48e-16;42!CL:0000049;4.10e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.72e-41!115;UBERON:0002390!2.53e-17!102;UBERON:0003061!2.53e-17!102;UBERON:0001049!3.96e-16!57;UBERON:0005068!3.96e-16!57;UBERON:0006241!3.96e-16!57;UBERON:0007135!3.96e-16!57;UBERON:0002193!2.54e-15!112;UBERON:0002371!4.68e-14!80;UBERON:0002616!5.40e-13!59;UBERON:0003080!7.99e-13!42;UBERON:0002780!1.14e-12!41;UBERON:0001890!1.14e-12!41;UBERON:0006240!1.14e-12!41;UBERON:0005743!1.16e-11!86;UBERON:0001017!1.52e-11!82;UBERON:0000955!1.59e-11!69;UBERON:0006238!1.59e-11!69;UBERON:0001474!1.67e-11!86;UBERON:0003075!1.45e-10!86;UBERON:0007284!1.45e-10!86;UBERON:0002405!6.46e-10!115;UBERON:0002020!1.58e-09!34;UBERON:0003528!1.58e-09!34;UBERON:0001893!1.88e-09!34;UBERON:0000073!2.03e-09!94;UBERON:0001016!2.03e-09!94;UBERON:0002346!3.37e-09!90;UBERON:0002791!3.63e-09!33;UBERON:0004765!6.18e-09!101;UBERON:0001434!6.18e-09!101;UBERON:0003056!1.74e-08!61;UBERON:0001869!2.03e-08!32;UBERON:0002619!2.15e-07!22;UBERON:0000153!2.83e-07!129;UBERON:0007811!2.83e-07!129;UBERON:0000033!9.57e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!5.72e-41!115;UBERON:0002390!2.53e-17!102;UBERON:0003061!2.53e-17!102;UBERON:0001049!3.96e-16!57;UBERON:0005068!3.96e-16!57;UBERON:0006241!3.96e-16!57;UBERON:0007135!3.96e-16!57;UBERON:0002193!2.54e-15!112;UBERON:0002371!4.68e-14!80;UBERON:0002616!5.40e-13!59;UBERON:0003080!7.99e-13!42;UBERON:0002780!1.14e-12!41;UBERON:0001890!1.14e-12!41;UBERON:0006240!1.14e-12!41;UBERON:0005743!1.16e-11!86;UBERON:0001017!1.52e-11!82;UBERON:0000955!1.59e-11!69;UBERON:0006238!1.59e-11!69;UBERON:0001474!1.67e-11!86;UBERON:0003075!1.45e-10!86;UBERON:0007284!1.45e-10!86;UBERON:0002405!6.46e-10!115;UBERON:0002020!1.58e-09!34;UBERON:0003528!1.58e-09!34;UBERON:0001893!1.88e-09!34;UBERON:0000073!2.03e-09!94;UBERON:0001016!2.03e-09!94;UBERON:0002346!3.37e-09!90;UBERON:0002791!3.63e-09!33;UBERON:0004765!6.18e-09!101;UBERON:0001434!6.18e-09!101;UBERON:0003056!1.74e-08!61;UBERON:0001869!2.03e-08!32;UBERON:0002619!2.15e-07!22;UBERON:0000153!2.83e-07!129;UBERON:0007811!2.83e-07!129;UBERON:0000033!9.57e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.02e-11;114!UBERON:0002780;5.37e-11;41!UBERON:0001890;5.37e-11;41!UBERON:0000073;1.82e-10;53!UBERON:0002616;1.82e-10;53!UBERON:0001893;2.53e-09;34!UBERON:0003528;3.00e-09;34!UBERON:0002020;3.00e-09;34!UBERON:0002791;6.25e-09;32!UBERON:0001869;1.12e-08;32!UBERON:0002619;1.03e-07;22!UBERON:0000125;4.79e-07;9!UBERON:0002308;4.79e-07;9!UBERON:0002420;4.93e-07;9!UBERON:0007245;4.93e-07;9!UBERON:0010009;4.93e-07;9!UBERON:0010011;4.93e-07;9!UBERON:0000454;4.93e-07;9 | |||
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| ||
|short_description=p1@ADAM28 | |short_description=p1@ADAM28 | ||
}} | }} |
Latest revision as of 15:06, 17 September 2015
Short description: | p1@ADAM28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAM28_5end |
Coexpression cluster: | C4745_CD19_CD14_stomach_immature_epididymis_spinal_smallcell |
Association with transcript: | 0bp_to_ENST00000397649, ENST00000520448, ENST00000523379, ENST00000540823, NM_014265, NM_021777, uc003xdx.2, uc003xdy.2, uc011kzz.1, uc011laa.1_5end |
EntrezGene: | ADAM28 |
HGNC: | 206 |
UniProt: | E7EMU1E5RGY1E5RJQ1B4DDY3Q9UKQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.31e-28 | 168 |
leukocyte | 2.43e-27 | 136 |
defensive cell | 4.38e-26 | 48 |
phagocyte | 4.38e-26 | 48 |
myeloid cell | 8.22e-26 | 108 |
common myeloid progenitor | 8.22e-26 | 108 |
hematopoietic oligopotent progenitor cell | 2.45e-25 | 161 |
hematopoietic multipotent progenitor cell | 2.45e-25 | 161 |
hematopoietic cell | 1.24e-24 | 177 |
myeloid leukocyte | 2.84e-24 | 72 |
macrophage dendritic cell progenitor | 4.31e-24 | 61 |
monopoietic cell | 2.04e-22 | 59 |
monocyte | 2.04e-22 | 59 |
monoblast | 2.04e-22 | 59 |
promonocyte | 2.04e-22 | 59 |
granulocyte monocyte progenitor cell | 1.29e-21 | 67 |
classical monocyte | 2.10e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-21 | 42 |
nongranular leukocyte | 4.97e-21 | 115 |
myeloid lineage restricted progenitor cell | 5.87e-19 | 66 |
hematopoietic lineage restricted progenitor cell | 2.31e-18 | 120 |
B cell | 2.24e-12 | 14 |
lymphocyte of B lineage | 5.65e-07 | 24 |
pro-B cell | 5.65e-07 | 24 |
granulocyte | 7.26e-07 | 8 |