FFCP PHASE1:Hg19::chr11:31832807..31832823,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000241001_5end | |association_with_transcript=-22bp_to_ENST00000241001_5end | ||
|cluster_id=chr11:31832807..31832823,- | |||
|coexpression_cluster_id=C798 | |coexpression_cluster_id=C798 | ||
|description=CAGE_peak_4_at_PAX6_5end | |description=CAGE_peak_4_at_PAX6_5end | ||
|id=chr11:31832807..31832823,- | |id=chr11:31832807..31832823,- | ||
|ontology_enrichment_celltype=CL:0002319!1.26e-08!25;CL:0000128!2.20e-07!7;CL:0000126!2.20e-07!7;CL:0000127!2.20e-07!7;CL:0002453!2.20e-07!7 | |ontology_enrichment_celltype=CL:0002319!1.26e-08!25;CL:0000128!2.20e-07!7;CL:0000126!2.20e-07!7;CL:0000127!2.20e-07!7;CL:0002453!2.20e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000128;8.26e-08;7!CL:0000126;8.26e-08;7!CL:0000127;8.26e-08;7!CL:0002319;1.11e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,7.63e-08,7;CL:0000126,7.63e-08,7;CL:0000127,7.63e-08,7;CL:0002453,7.63e-08,7;CL:0002319,1.06e-07,25;CL:0000133,2.99e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.47e-11;82 | |||
|ontology_enrichment_disease=DOID:0050687!7.97e-10!143;DOID:14566!8.00e-07!239;DOID:162!9.93e-07!235 | |ontology_enrichment_disease=DOID:0050687!7.97e-10!143;DOID:14566!8.00e-07!239;DOID:162!9.93e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.41e-55!94;UBERON:0001016!2.41e-55!94;UBERON:0005743!1.14e-53!86;UBERON:0001049!1.11e-51!57;UBERON:0005068!1.11e-51!57;UBERON:0006241!1.11e-51!57;UBERON:0007135!1.11e-51!57;UBERON:0002346!1.94e-51!90;UBERON:0001017!2.87e-50!82;UBERON:0003075!2.97e-50!86;UBERON:0007284!2.97e-50!86;UBERON:0002616!6.66e-46!59;UBERON:0003056!8.58e-45!61;UBERON:0000955!1.81e-43!69;UBERON:0006238!1.81e-43!69;UBERON:0002780!9.36e-40!41;UBERON:0001890!9.36e-40!41;UBERON:0006240!9.36e-40!41;UBERON:0003080!2.03e-38!42;UBERON:0002020!6.17e-34!34;UBERON:0003528!6.17e-34!34;UBERON:0001893!6.24e-34!34;UBERON:0002791!3.13e-33!33;UBERON:0000924!6.95e-33!173;UBERON:0006601!6.95e-33!173;UBERON:0001869!1.79e-32!32;UBERON:0000033!3.74e-32!123;UBERON:0004121!1.53e-31!169;UBERON:0000153!3.87e-31!129;UBERON:0007811!3.87e-31!129;UBERON:0000956!3.38e-26!25;UBERON:0000203!3.38e-26!25;UBERON:0002619!7.72e-23!22;UBERON:0001950!1.09e-20!20;UBERON:0007023!4.26e-15!115;UBERON:0003076!6.30e-14!15;UBERON:0003057!6.30e-14!15;UBERON:0004732!7.81e-12!13;UBERON:0004733!3.39e-11!12;UBERON:0002028!3.39e-11!12;UBERON:0007277!3.39e-11!12;UBERON:0007625!6.84e-11!11;UBERON:0002104!5.76e-10!21;UBERON:0002420!1.32e-09!9;UBERON:0007245!1.32e-09!9;UBERON:0010009!1.32e-09!9;UBERON:0010011!1.32e-09!9;UBERON:0000454!1.32e-09!9;UBERON:0000970!2.40e-09!20;UBERON:0002308!4.00e-09!9;UBERON:0000125!4.00e-09!9;UBERON:0001871!5.18e-09!7;UBERON:0002680!1.04e-08!9;UBERON:0001895!1.04e-08!9;UBERON:0010092!1.04e-08!9;UBERON:0000064!1.11e-08!219;UBERON:0000019!1.95e-08!19;UBERON:0000047!1.95e-08!19;UBERON:0004088!1.95e-08!19;UBERON:0003072!1.95e-08!19;UBERON:0003071!1.95e-08!19;UBERON:0004128!1.95e-08!19;UBERON:0001032!4.36e-08!24;UBERON:0004456!4.36e-08!24;UBERON:0009663!1.29e-07!7;UBERON:0000020!1.62e-07!23;UBERON:0001456!3.13e-07!21;UBERON:0001894!3.64e-07!7;UBERON:0006222!3.64e-07!7;UBERON:0000200!6.00e-07!6;UBERON:0000025!8.02e-07!194;UBERON:0002037!8.68e-07!6;UBERON:0006215!8.68e-07!6 | |ontology_enrichment_uberon=UBERON:0000073!2.41e-55!94;UBERON:0001016!2.41e-55!94;UBERON:0005743!1.14e-53!86;UBERON:0001049!1.11e-51!57;UBERON:0005068!1.11e-51!57;UBERON:0006241!1.11e-51!57;UBERON:0007135!1.11e-51!57;UBERON:0002346!1.94e-51!90;UBERON:0001017!2.87e-50!82;UBERON:0003075!2.97e-50!86;UBERON:0007284!2.97e-50!86;UBERON:0002616!6.66e-46!59;UBERON:0003056!8.58e-45!61;UBERON:0000955!1.81e-43!69;UBERON:0006238!1.81e-43!69;UBERON:0002780!9.36e-40!41;UBERON:0001890!9.36e-40!41;UBERON:0006240!9.36e-40!41;UBERON:0003080!2.03e-38!42;UBERON:0002020!6.17e-34!34;UBERON:0003528!6.17e-34!34;UBERON:0001893!6.24e-34!34;UBERON:0002791!3.13e-33!33;UBERON:0000924!6.95e-33!173;UBERON:0006601!6.95e-33!173;UBERON:0001869!1.79e-32!32;UBERON:0000033!3.74e-32!123;UBERON:0004121!1.53e-31!169;UBERON:0000153!3.87e-31!129;UBERON:0007811!3.87e-31!129;UBERON:0000956!3.38e-26!25;UBERON:0000203!3.38e-26!25;UBERON:0002619!7.72e-23!22;UBERON:0001950!1.09e-20!20;UBERON:0007023!4.26e-15!115;UBERON:0003076!6.30e-14!15;UBERON:0003057!6.30e-14!15;UBERON:0004732!7.81e-12!13;UBERON:0004733!3.39e-11!12;UBERON:0002028!3.39e-11!12;UBERON:0007277!3.39e-11!12;UBERON:0007625!6.84e-11!11;UBERON:0002104!5.76e-10!21;UBERON:0002420!1.32e-09!9;UBERON:0007245!1.32e-09!9;UBERON:0010009!1.32e-09!9;UBERON:0010011!1.32e-09!9;UBERON:0000454!1.32e-09!9;UBERON:0000970!2.40e-09!20;UBERON:0002308!4.00e-09!9;UBERON:0000125!4.00e-09!9;UBERON:0001871!5.18e-09!7;UBERON:0002680!1.04e-08!9;UBERON:0001895!1.04e-08!9;UBERON:0010092!1.04e-08!9;UBERON:0000064!1.11e-08!219;UBERON:0000019!1.95e-08!19;UBERON:0000047!1.95e-08!19;UBERON:0004088!1.95e-08!19;UBERON:0003072!1.95e-08!19;UBERON:0003071!1.95e-08!19;UBERON:0004128!1.95e-08!19;UBERON:0001032!4.36e-08!24;UBERON:0004456!4.36e-08!24;UBERON:0009663!1.29e-07!7;UBERON:0000020!1.62e-07!23;UBERON:0001456!3.13e-07!21;UBERON:0001894!3.64e-07!7;UBERON:0006222!3.64e-07!7;UBERON:0000200!6.00e-07!6;UBERON:0000025!8.02e-07!194;UBERON:0002037!8.68e-07!6;UBERON:0006215!8.68e-07!6 | ||
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| ||
|short_description=p4@PAX6 | |short_description=p4@PAX6 | ||
}} | }} |
Latest revision as of 15:00, 17 September 2015
Short description: | p4@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAX6_5end |
Coexpression cluster: | C798_cerebellum_small_carcinosarcoma_argyrophil_Neural_gastric_Ciliary |
Association with transcript: | -22bp_to_ENST00000241001_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 7.63e-08 | 7 |
macroglial cell | 7.63e-08 | 7 |
astrocyte | 7.63e-08 | 7 |
oligodendrocyte precursor cell | 7.63e-08 | 7 |
neural cell | 1.06e-07 | 25 |
neurectodermal cell | 2.99e-07 | 59 |