FFCP PHASE1:Hg19::chr11:31832549..31832562,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P26367 | |UniProt=P26367 | ||
|association_with_transcript=30bp_to_ENST00000379111,uc001mte.3_5end | |association_with_transcript=30bp_to_ENST00000379111,uc001mte.3_5end | ||
|cluster_id=chr11:31832549..31832562,- | |||
|description=CAGE_peak_10_at_PAX6_5end | |description=CAGE_peak_10_at_PAX6_5end | ||
|id=chr11:31832549..31832562,- | |id=chr11:31832549..31832562,- |
Latest revision as of 14:55, 17 September 2015
Short description: | p10@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PAX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000379111, uc001mte.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p10@PAX6 |
---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.88e-20 | 3 |
ciliated epithelial cell | 1.88e-20 | 3 |
multi-ciliated epithelial cell | 1.88e-20 | 3 |
non-pigmented ciliary epithelial cell | 1.88e-20 | 3 |
crystallin accumulating cell | 4.61e-15 | 4 |
vertebrate lens cell | 4.61e-15 | 4 |
lens epithelial cell | 4.61e-15 | 4 |
columnar/cuboidal epithelial cell | 3.55e-08 | 27 |
neuronal stem cell | 4.43e-08 | 8 |
pigment cell (sensu Vertebrata) | 6.52e-08 | 1 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
eye | 7.47e-29 | 21 |
visual system | 7.47e-29 | 21 |
anterior segment of eyeball | 2.04e-28 | 14 |
pigment epithelium of eye | 3.44e-28 | 11 |
atypical epithelium | 1.28e-26 | 4 |
sense organ | 4.88e-25 | 24 |
sensory system | 4.88e-25 | 24 |
entire sense organ system | 4.88e-25 | 24 |
camera-type eye | 1.16e-24 | 20 |
simple eye | 1.16e-24 | 20 |
Showing 1 to 10 of 66 entries