FFCP PHASE1:Hg19::chr1:156076341..156076364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4000 | |EntrezGene=4000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6636 | |HGNC=6636 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-84bp_to_ENST00000515711_5end | |association_with_transcript=-84bp_to_ENST00000515711_5end | ||
|cluster_id=chr1:156076341..156076364,+ | |||
|coexpression_cluster_id=C2144 | |||
|description=CAGE_peak_22_at_LMNA_5end | |description=CAGE_peak_22_at_LMNA_5end | ||
|id=chr1:156076341..156076364,+ | |id=chr1:156076341..156076364,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.28e-21!42;CL:0000860!1.85e-20!45;CL:0000738!2.50e-18!140;CL:0000557!1.41e-15!71;CL:0002031!4.00e-15!124;CL:0002087!1.66e-14!119;CL:0002009!1.14e-13!65;CL:0000766!1.27e-13!76;CL:0000037!1.84e-13!172;CL:0000566!1.84e-13!172;CL:0000988!2.43e-13!182;CL:0000839!1.04e-12!70;CL:0002194!2.48e-12!63;CL:0000576!2.48e-12!63;CL:0000040!2.48e-12!63;CL:0000559!2.48e-12!63;CL:0002032!8.09e-12!165;CL:0000837!8.09e-12!165;CL:0000763!1.20e-09!112;CL:0000049!1.20e-09!112;CL:0002393!9.85e-09!9;CL:0002397!9.85e-09!9;CL:0000624!1.56e-07!6 | |ontology_enrichment_celltype=CL:0002057!1.28e-21!42;CL:0000860!1.85e-20!45;CL:0000738!2.50e-18!140;CL:0000557!1.41e-15!71;CL:0002031!4.00e-15!124;CL:0002087!1.66e-14!119;CL:0002009!1.14e-13!65;CL:0000766!1.27e-13!76;CL:0000037!1.84e-13!172;CL:0000566!1.84e-13!172;CL:0000988!2.43e-13!182;CL:0000839!1.04e-12!70;CL:0002194!2.48e-12!63;CL:0000576!2.48e-12!63;CL:0000040!2.48e-12!63;CL:0000559!2.48e-12!63;CL:0002032!8.09e-12!165;CL:0000837!8.09e-12!165;CL:0000763!1.20e-09!112;CL:0000049!1.20e-09!112;CL:0002393!9.85e-09!9;CL:0002397!9.85e-09!9;CL:0000624!1.56e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000624;9.81e-25;6!CL:0000791;4.10e-17;18!CL:0000789;4.10e-17;18!CL:0002419;4.10e-17;18!CL:0000860;6.92e-14;33!CL:0002057;6.92e-14;33!CL:0000767;1.19e-13;3!CL:0000623;2.14e-13;3!CL:0000898;6.66e-13;3!CL:0000576;1.65e-12;48!CL:0000084;7.44e-12;25!CL:0000766;1.73e-11;69!CL:0002393;4.80e-11;6!CL:0002397;4.80e-11;6!CL:0000473;7.49e-11;39!CL:0000234;7.49e-11;39!CL:0000815;3.90e-09;2!CL:0000792;3.90e-09;2!CL:0002677;3.90e-09;2!CL:0000097;1.24e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.23e-32,136;CL:0002031,1.40e-28,120;CL:0000037,3.00e-26,168;CL:0000988,3.85e-26,177;CL:0002032,5.07e-26,161;CL:0000837,5.07e-26,161;CL:0000624,1.29e-24,6;CL:0002087,4.53e-24,115;CL:0000766,2.90e-23,72;CL:0000557,6.48e-23,67;CL:0000860,2.53e-20,42;CL:0002057,2.53e-20,42;CL:0000473,1.12e-19,48;CL:0000234,1.12e-19,48;CL:0000839,1.18e-18,66;CL:0000791,4.45e-17,18;CL:0000789,4.45e-17,18;CL:0002420,4.45e-17,18;CL:0002419,4.45e-17,18;CL:0000790,4.45e-17,18;CL:0000763,6.01e-17,108;CL:0000049,6.01e-17,108;CL:0002009,2.07e-16,61;CL:0002194,5.92e-15,59;CL:0000576,5.92e-15,59;CL:0000040,5.92e-15,59;CL:0000559,5.92e-15,59;CL:0000767,9.69e-14,3;CL:0000623,2.06e-13,3;CL:0000825,2.06e-13,3;CL:0000898,9.05e-13,3;CL:0000084,7.88e-12,25;CL:0000827,7.88e-12,25;CL:0000815,5.10e-09,2;CL:0000792,5.10e-09,2;CL:0002677,5.10e-09,2;CL:0000838,5.82e-09,52;CL:0000542,9.56e-09,53;CL:0000051,9.56e-09,53;CL:0000134,9.82e-09,354;CL:0002320,2.12e-08,361;CL:0000097,1.15e-07,5;CL:0002028,1.15e-07,5;CL:0002393,1.99e-07,9;CL:0002397,1.99e-07,9;CL:0000219,3.13e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;4.10e-17;18!CL:0002057;7.34e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.41e-15!86;UBERON:0002371!6.59e-15!80;UBERON:0002390!1.44e-13!102;UBERON:0003061!1.44e-13!102;UBERON:0004765!7.64e-12!101;UBERON:0001434!7.64e-12!101;UBERON:0002193!8.06e-11!112;UBERON:0002405!4.62e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.29e-19,76;UBERON:0002390,4.58e-19,98;UBERON:0003061,4.58e-19,98;UBERON:0001474,8.12e-18,82;UBERON:0002405,8.61e-17,93;UBERON:0002193,9.05e-17,108;UBERON:0004765,8.62e-16,90;UBERON:0001434,1.03e-13,100;UBERON:0002384,6.02e-08,371;UBERON:0003081,4.73e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90046415273356,2.68680578668049,4.4896675761662,0.919421224478927,0,0.369754010166788,0,0,0.880801318004542,1.66198622559563,2.20598892217156,5.4252717678963,0,0,0,0,0,0,1.39457422143411,1.6446715520873,1.23882548358041,0.28769239232215,1.5369642391746,1.41889337933151,0.689491361473237,6.45484683583826,0,0.376484679085209,1.63743690034707,0.224723484445085,0.306083892370903,0.641858054152187,0,0,1.19678194572979,0.426224750532694,0.580418477257168,0,0.622822248995575,1.00499466102697,2.08593167368081,2.82345498116652,0.605399502633369,1.10483290796269,0.632924774881769,0.633765858935825,0.637812899895131,1.46761051855863,0.673971786878971,0.450530678524519,0.16072558669708,0.285012743741249,0.39783335439818,0.547992461293902,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0.382273228125229,2.64342657158052,0.560508562981536,0,3.540775862049,3.93010762749165,3.08402248499264,0,3.2592226663359,2.8406868344084,7.79306913631645,0.111410456885174,1.17842362989935,1.10766947291811,0.812411591295047,0.128091319725675,0,0,0,0,1.33457906845854,2.67540828089713,5.22677619024884,0,2.29932296161153,4.81078423675682,3.54227568827304,0.637130828648193,0,0,0.301150238155546,0.127986611154418,0,0,0,2.21767417547206,1.87208137048455,3.04131248153878,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0,0.168776332241266,0.194874010322397,0.252433774244115,0,0,0,0,0.339121184620975,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.110293972732394,0,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,1.65862492432618,1.29707958075265,2.27236380167484,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0,0,0,0,0,0.289562613335158,0,0,0,2.36436912242313,3.23441362289276,3.85029108839245,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0.413536052245775,1.72571360654893,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0.330037999682352,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0.19924798825107,0.552567831062295,0.503865495708552,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0,0,0,0,0,0.217294743844016,0,0,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0,2.37216902944498,0.988511511572023,0.417687798021821,0,0,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0.30607276163049,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0.219267951258557,0,0,0,0,0,0,0.189932387867636,0,0,0.85381197895741,0,0,0,0.171594997861965,0.14405479798815,0.124252535565433,0.235694034616795,0,0.104602846312333,0,0,0,0,3.83239764200917,0,0.525774708558629,0.558564802544508,0.687481272035051,0,0,0.429226048136571,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.899895566206002,5.41661368190565,0.121499113316049,0,0,0,0,0.537862017998534,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0.983617892129413,0,0,0,0.1251909307065,0,0,0,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0.50313580350515,0.889811221596536,0.228840068396924,0.302461847526478,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.751288044986092,0,0,0,0.107410557042488,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.398594520940089,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0.622077260032973,0,0,0.157265941855896,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.345786262321089,0,0,0.0981477185010256,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| ||
|short_description=p22@LMNA | |short_description=p22@LMNA | ||
}} | }} |
Latest revision as of 14:51, 17 September 2015
Short description: | p22@LMNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_LMNA_5end |
Coexpression cluster: | C2144_Basophils_CD14_Eosinophils_CD4_CD19_Natural_Mast |
Association with transcript: | -84bp_to_ENST00000515711_5end |
EntrezGene: | LMNA |
HGNC: | 6636 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.29e-19 | 76 |
hematopoietic system | 4.58e-19 | 98 |
blood island | 4.58e-19 | 98 |
bone element | 8.12e-18 | 82 |
immune system | 8.61e-17 | 93 |
hemolymphoid system | 9.05e-17 | 108 |
skeletal element | 8.62e-16 | 90 |
skeletal system | 1.03e-13 | 100 |
connective tissue | 6.02e-08 | 371 |
lateral plate mesoderm | 4.73e-07 | 203 |