FFCP PHASE1:Hg19::chr6:2971849..2971875,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=5269 | |EntrezGene=5269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8950 | |HGNC=8950 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P35237 | |UniProt=P35237 | ||
|association_with_transcript=-30bp_to_ENST00000380546_5end | |association_with_transcript=-30bp_to_ENST00000380546_5end | ||
|cluster_id=chr6:2971849..2971875,- | |||
|description=CAGE_peak_4_at_SERPINB6_5end | |description=CAGE_peak_4_at_SERPINB6_5end | ||
|id=chr6:2971849..2971875,- | |id=chr6:2971849..2971875,- | ||
Latest revision as of 14:39, 17 September 2015
| Short description: | p4@SERPINB6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_SERPINB6_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -30bp_to_ENST00000380546_5end |
| EntrezGene: | SERPINB6 |
| HGNC: | 8950 |
| UniProt: | P35237 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@SERPINB6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 7.60e-22 | 121 |
| embryonic cell | 1.25e-15 | 250 |
| vascular associated smooth muscle cell | 1.70e-12 | 32 |
| endothelial cell | 3.57e-12 | 36 |
| muscle precursor cell | 1.86e-11 | 58 |
| myoblast | 1.86e-11 | 58 |
| multi-potent skeletal muscle stem cell | 1.86e-11 | 58 |
| muscle cell | 2.67e-11 | 55 |
| smooth muscle cell | 3.72e-11 | 43 |
| smooth muscle myoblast | 3.72e-11 | 43 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| vasculature | 4.45e-22 | 78 |
| vascular system | 4.45e-22 | 78 |
| circulatory system | 1.47e-19 | 112 |
| splanchnic layer of lateral plate mesoderm | 2.21e-19 | 83 |
| vessel | 6.10e-19 | 68 |
| cardiovascular system | 3.75e-18 | 109 |
| epithelial tube | 3.39e-17 | 117 |
| epithelial tube open at both ends | 8.64e-17 | 59 |
| blood vessel | 8.64e-17 | 59 |
| blood vasculature | 8.64e-17 | 59 |
Showing 1 to 10 of 48 entries
