FFCP PHASE1:Hg19::chr6:2971443..2971457,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5269 | |EntrezGene=5269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8950 | |HGNC=8950 | ||
|TSSclassifier=strong | |||
|UniProt=P35237 | |UniProt=P35237 | ||
|association_with_transcript=-3bp_to_ENST00000380529_5end | |association_with_transcript=-3bp_to_ENST00000380529_5end | ||
|cluster_id=chr6:2971443..2971457,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_14_at_SERPINB6_5end | |description=CAGE_peak_14_at_SERPINB6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;4.10e-23;1!CL:0000557;4.10e-23;1!CL:0000062;9.23e-11;9!CL:0002592;1.30e-08;3!CL:0000306;9.10e-07;4!CL:0002222;9.10e-07;4!CL:0002224;9.10e-07;4 | |ontology_enrichment_celltype_v019=CL:0002032;4.10e-23;1!CL:0000557;4.10e-23;1!CL:0000062;9.23e-11;9!CL:0002592;1.30e-08;3!CL:0000306;9.10e-07;4!CL:0002222;9.10e-07;4!CL:0002224;9.10e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000062,6.10e-09,11;CL:0000375,6.10e-09,11;CL:0000335,6.10e-09,11;CL:0002592,1.12e-08,3;CL:0000306,9.63e-07,4;CL:0002222,9.63e-07,4;CL:0002224,9.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10!CL:0000335;5.63e-09;11 | |ontology_enrichment_development_v019=UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10!CL:0000335;5.63e-09;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.64e-12!115 | |ontology_enrichment_uberon=UBERON:0007023!5.64e-12!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0003498;1.30e-08;3!UBERON:0005985;1.30e-08;3!UBERON:0001621;1.30e-08;3!UBERON:0010077;9.10e-07;4!UBERON:0005389;9.10e-07;4!UBERON:0000484;9.10e-07;4!UBERON:0000965;9.10e-07;4!UBERON:0001803;9.10e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0003498;1.30e-08;3!UBERON:0005985;1.30e-08;3!UBERON:0001621;1.30e-08;3!UBERON:0010077;9.10e-07;4!UBERON:0005389;9.10e-07;4!UBERON:0000484;9.10e-07;4!UBERON:0000965;9.10e-07;4!UBERON:0001803;9.10e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.54e-12,8;UBERON:0003135,4.08e-09,11;UBERON:0001621,1.12e-08,3;UBERON:0010077,9.63e-07,4;UBERON:0005389,9.63e-07,4;UBERON:0000484,9.63e-07,4;UBERON:0002546,9.63e-07,4;UBERON:0000965,9.63e-07,4;UBERON:0001803,9.63e-07,4;UBERON:0003073,9.63e-07,4;UBERON:0005426,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.674170453335254,0,0,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,6.54895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0.157702415033935,0,0.300946099727719,2.27407504055985,1.03473071292505,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0.608731130888112,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0.179736702294654,0,0.511572370226872,0,0,0,0.969332746095218,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.208843899010911,0.202203398942031,0,0.468528891450678,0,0,0.242780379534093,0.394584402849391,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0.229160424011684,0.717873024576814,0.399358000997982,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0.191915197319445,0.714695326373367,0,0,0.542999601753713,0,0,1.19730191562487,0,0,0.113312091520126,0,0,0.387848869084652,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0.470531639396343,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.385239660814607,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0,0.138314504928436,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.317079050969534,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,16.443977513358,21.9730586728066,0,0.103432995861895,0.639701945702943,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.674170453335254,0,0,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,6.54895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0.157702415033935,0,0.300946099727719,2.27407504055985,1.03473071292505,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0.608731130888112,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0.179736702294654,0,0.511572370226872,0,0,0,0.969332746095218,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.208843899010911,0.202203398942031,0,0.468528891450678,0,0,0.242780379534093,0.394584402849391,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0.229160424011684,0.717873024576814,0.399358000997982,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0.191915197319445,0.714695326373367,0,0,0.542999601753713,0,0,1.19730191562487,0,0,0.113312091520126,0,0,0.387848869084652,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0.470531639396343,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.385239660814607,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0,0.138314504928436,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.317079050969534,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,16.443977513358,21.9730586728066,0,0.103432995861895,0.639701945702943,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p14@SERPINB6 | |short_description=p14@SERPINB6 | ||
}} | }} |
Latest revision as of 14:29, 17 September 2015
Short description: | p14@SERPINB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SERPINB6_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -3bp_to_ENST00000380529_5end |
EntrezGene: | SERPINB6 |
HGNC: | 8950 |
UniProt: | P35237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 6.10e-09 | 11 |
osteoprogenitor cell | 6.10e-09 | 11 |
mesenchyme condensation cell | 6.10e-09 | 11 |
smooth muscle cell of the coronary artery | 1.12e-08 | 3 |
crystallin accumulating cell | 9.63e-07 | 4 |
vertebrate lens cell | 9.63e-07 | 4 |
lens epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 3.54e-12 | 8 |
male reproductive organ | 4.08e-09 | 11 |
coronary artery | 1.12e-08 | 3 |
cuboidal epithelium | 9.63e-07 | 4 |
transparent eye structure | 9.63e-07 | 4 |
simple cuboidal epithelium | 9.63e-07 | 4 |
cranial placode | 9.63e-07 | 4 |
lens of camera-type eye | 9.63e-07 | 4 |
epithelium of lens | 9.63e-07 | 4 |
lens placode | 9.63e-07 | 4 |
lens vesicle | 9.63e-07 | 4 |