FFCP PHASE1:Hg19::chr12:15114191..15114233,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=397 | |EntrezGene=397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=679 | |HGNC=679 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6Q0 | |UniProt=F5H6Q0 | ||
|association_with_transcript=0bp_to_ENST00000541380_5end | |association_with_transcript=0bp_to_ENST00000541380_5end | ||
|cluster_id=chr12:15114191..15114233,- | |||
|coexpression_cluster_id=C623 | |||
|description=CAGE_peak_5_at_ARHGDIB_5end | |description=CAGE_peak_5_at_ARHGDIB_5end | ||
|id=chr12:15114191..15114233,- | |id=chr12:15114191..15114233,- | ||
|ontology_enrichment_celltype=CL:0000037!7.87e-67!172;CL:0000566!7.87e-67!172;CL:0000988!3.91e-64!182;CL:0002032!1.01e-62!165;CL:0000837!1.01e-62!165;CL:0000738!5.77e-55!140;CL:0000763!1.74e-48!112;CL:0000049!1.74e-48!112;CL:0002031!2.71e-44!124;CL:0002087!1.15e-42!119;CL:0000766!1.87e-37!76;CL:0000557!3.67e-33!71;CL:0000839!2.21e-31!70;CL:0002009!3.59e-30!65;CL:0002194!6.04e-29!63;CL:0000576!6.04e-29!63;CL:0000040!6.04e-29!63;CL:0000559!6.04e-29!63;CL:0002057!8.76e-24!42;CL:0000860!1.26e-20!45;CL:0000542!2.20e-12!53;CL:0000051!2.20e-12!53;CL:0000838!6.92e-12!52;CL:0000134!1.12e-11!358;CL:0002320!1.49e-10!365;CL:0000945!3.77e-10!24;CL:0000826!3.77e-10!24;CL:0002393!1.79e-07!9;CL:0002397!1.79e-07!9;CL:0000094!3.62e-07!8;CL:0000219!4.70e-07!390;CL:0000048!6.19e-07!430 | |ontology_enrichment_celltype=CL:0000037!7.87e-67!172;CL:0000566!7.87e-67!172;CL:0000988!3.91e-64!182;CL:0002032!1.01e-62!165;CL:0000837!1.01e-62!165;CL:0000738!5.77e-55!140;CL:0000763!1.74e-48!112;CL:0000049!1.74e-48!112;CL:0002031!2.71e-44!124;CL:0002087!1.15e-42!119;CL:0000766!1.87e-37!76;CL:0000557!3.67e-33!71;CL:0000839!2.21e-31!70;CL:0002009!3.59e-30!65;CL:0002194!6.04e-29!63;CL:0000576!6.04e-29!63;CL:0000040!6.04e-29!63;CL:0000559!6.04e-29!63;CL:0002057!8.76e-24!42;CL:0000860!1.26e-20!45;CL:0000542!2.20e-12!53;CL:0000051!2.20e-12!53;CL:0000838!6.92e-12!52;CL:0000134!1.12e-11!358;CL:0002320!1.49e-10!365;CL:0000945!3.77e-10!24;CL:0000826!3.77e-10!24;CL:0002393!1.79e-07!9;CL:0002397!1.79e-07!9;CL:0000094!3.62e-07!8;CL:0000219!4.70e-07!390;CL:0000048!6.19e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000576;9.87e-27;48!CL:0000473;3.34e-26;39!CL:0000234;3.34e-26;39!CL:0000766;8.41e-26;69!CL:0000860;1.11e-24;33!CL:0002057;1.11e-24;33!CL:0000763;8.82e-22;100!CL:0000738;1.30e-15;136!CL:0002087;4.99e-15;104!CL:0000988;5.01e-14;177!CL:0000945;3.21e-11;24!CL:0000094;2.17e-10;8!CL:0000235;3.14e-08;6!CL:0002393;1.95e-07;6!CL:0002397;1.95e-07;6!CL:0000840;2.55e-07;5!CL:0000081;6.71e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.93e-85,168;CL:0002032,1.06e-78,161;CL:0000837,1.06e-78,161;CL:0000988,3.04e-78,177;CL:0000763,1.70e-73,108;CL:0000049,1.70e-73,108;CL:0000738,1.90e-70,136;CL:0000766,3.83e-65,72;CL:0000557,4.35e-58,67;CL:0002031,2.29e-56,120;CL:0002087,2.55e-55,115;CL:0002009,2.46e-53,61;CL:0000839,3.26e-53,66;CL:0002194,2.37e-51,59;CL:0000576,2.37e-51,59;CL:0000040,2.37e-51,59;CL:0000559,2.37e-51,59;CL:0000473,1.80e-43,48;CL:0000234,1.80e-43,48;CL:0000860,1.22e-36,42;CL:0002057,1.22e-36,42;CL:0000134,3.71e-22,354;CL:0002320,6.06e-21,361;CL:0000219,9.63e-17,386;CL:0000048,6.02e-15,427;CL:0000034,8.57e-15,441;CL:0000723,3.39e-14,433;CL:0000945,3.29e-11,24;CL:0000826,3.29e-11,24;CL:0002393,6.95e-11,9;CL:0002397,6.95e-11,9;CL:0000094,2.11e-10,8;CL:0000542,1.97e-08,53;CL:0000051,1.97e-08,53;CL:0000235,3.27e-08,6;CL:0000838,7.32e-08,52;CL:0000840,2.48e-07,5;CL:0001029,2.48e-07,5;CL:0000081,6.58e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.28e-26;42!CL:0000049;6.48e-19;108 | |||
|ontology_enrichment_disease=DOID:2531!8.00e-17!51;DOID:0060083!8.00e-17!51;DOID:1240!5.76e-14!39;DOID:8692!4.50e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.95e-14;31!DOID:1240;4.00e-13;39!DOID:2531;1.12e-12;51!DOID:0060083;1.12e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.32e-22,51;DOID:0060083,8.32e-22,51;DOID:1240,5.90e-17,39;DOID:8692,1.44e-14,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.99e-41!102;UBERON:0003061!3.99e-41!102;UBERON:0002193!6.17e-37!112;UBERON:0002371!9.15e-29!80;UBERON:0001474!3.15e-24!86;UBERON:0003081!5.29e-22!216;UBERON:0002405!1.33e-20!115;UBERON:0004765!4.29e-18!101;UBERON:0001434!4.29e-18!101;UBERON:0000178!1.11e-09!15;UBERON:0000179!1.11e-09!15;UBERON:0000463!1.11e-09!15;UBERON:0002384!1.48e-09!375;UBERON:0002204!2.78e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.22e-11;15!UBERON:0000179;9.22e-11;15!UBERON:0000463;9.22e-11;15!UBERON:0002390;2.38e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.15e-67,98;UBERON:0003061,2.15e-67,98;UBERON:0002193,1.56e-61,108;UBERON:0002371,3.55e-52,76;UBERON:0002405,9.83e-51,93;UBERON:0001474,1.64e-46,82;UBERON:0004765,3.66e-40,90;UBERON:0001434,1.06e-33,100;UBERON:0003081,2.62e-33,203;UBERON:0002384,6.04e-20,371;UBERON:0002204,4.87e-16,167;UBERON:0000926,5.94e-13,315;UBERON:0004120,5.94e-13,315;UBERON:0006603,5.94e-13,315;UBERON:0000178,8.47e-11,15;UBERON:0000179,8.47e-11,15;UBERON:0000463,8.47e-11,15 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.491467873003018,2.09340350391728,1.74753097704138,0.791300934685361,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,3.2857764471619,3.53032534634767,4.25038219093868,14.9478425202584,9.97956435052753,10.3726802621771,0,0,0,9.06366246789529,5.82893853198428,5.5784083473621,9.41792194504192,7.01905566145496,4.77423915574874,5.59788685599811,7.12566065241755,9.78787157009909,7.70610665531693,3.77875943688809,6.54976965207104,5.57829688573643,1.23350366406548,3.40677007984614,3.74000110018796,3.84241059793651,4.49316236788312,4.82643953031266,3.22742341791913,2.70852973188684,6.02375486536335,2.45615535052061,5.61808711112712,7.95818120164347,5.45579346029359,8.95071976118658,4.28806690242731,3.19141852194611,1.70489900213078,4.35313857942876,5.6738522469114,4.35975574296902,4.01997864410789,6.25779502104242,5.86409880703815,3.02699751316684,4.05105399586321,4.74693581161327,17.7454440502031,19.9848041967141,13.8374706035528,11.2328631146495,16.9699888910902,16.3940098431022,34.2015292489498,38.5898353766235,29.7742570636353,3.51992488922645,1.09227722252426,1.77901850772711,1.70692089026603,0.800791974072025,2.87376219977242,1.32208974556972,0.954053754535364,0.569212969109448,1.17447437874188,0.382273228125229,2.64342657158052,3.92355994087075,7.90152254325231,0.590129310341499,0.393010762749165,0.411202997999018,0.167186495390678,0.977766799900771,0.473447805734733,0,0.111410456885174,0.294605907474837,0.443067789167242,0.541607727530031,0.512365278902701,0.650296737799391,0.328875809207352,0.829050053357545,0.579606171470105,0.296573126324121,0.535081656179426,0,0.339928028092699,0.766440987203842,0.68725489096526,0.506039384039006,0.318565414324097,0,0,1.20460095262218,0.895906278080929,1.24930726552346,1.89421801635213,0,0.604820229674197,0.534880391567015,0.579297615531196,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.851363990735132,0.364295288292542,0.741568885568859,46.4102772926197,41.0946180026271,36.4304811821691,1.43094374583205,2.28797964312051,1.11437250398869,0.596287222100115,1.72046919021225,0.347140501607594,1.69592382577203,1.67799774483962,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0.367663080345869,0,0.357198913136319,0.44905874525234,0.337834441449967,0,2.84779697870439,1.09921046358244,27.6738876615733,23.2668158488995,0,0,0,0,0,0.709336764396714,0,0,0,0.933633106199299,0.134710672069688,0.980771418680752,0.151357427644931,0,0,1.87296046098192,0.570471821544449,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0,0,0,0,0.339121184620975,0.57978255948989,0,1.14721838155602,0,0,0,0,0,0,0,0.643240938192885,2.76269842704961,1.39310378409594,1.44375896333917,0,0,0,0.110293972732394,0,0,0,0,0,0,0,1.2347220339942,0,0,0.982827216677626,0,3.09024169590255,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,32.254427797449,43.7587975810374,37.6036840590482,0.93733833986777,0.16798212819886,0.567100388969546,0.716468181622786,0,0,2.46331618947972,5.10680917276711,7.87846839054934,5.47655822984453,4.54472760334968,0,0,0,0,0,0,0,0.448524337381443,0,0.36669142910475,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,12.162378064119,13.0586843772353,16.8667151586425,0.239624855491583,0,0,0,0,0,3.6988097517864,1.77327684181734,0.215627574859517,1.15508732651774,0,0,0,0.837581326671744,0,55.4265197720915,23.932916736322,46.414537504836,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0,0.195801157462741,0,8.2707210449155,5.82428342210265,3.842192080924,0.303127571446259,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,1.19065593693561,0.431831832204279,0,0,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0.522870902049801,0,0,0,1.23649213977267,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0.495854746082934,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,2.15623506123262,3.19383618190213,0.869932992075073,1.8532421910392,0.858749320451947,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0,0.117812402345686,3.43710218674637,0,1.26377536871694,0,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0,2.478587984798,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0,0,0.349934720244983,0.577332676353072,0,1.08890984861323,1.31801321087491,0,0,0,0,47.7000752678239,46.6428696356849,38.1663615406689,27.3966541776457,34.9657932123265,42.1507652275266,41.5824206673348,39.6562588147135,0,0,0.245040215981032,7.06052065477731,2.16403819464667,0.924843963529383,1.27541018183058,2.3949524571938,10.9158060975449,2.32840940996271,13.6341214915313,6.73913227472301,6.84704037099577,26.3222224898679,0,6.43308755646092,4.65705417800729,13.1169809674181,18.311388220684,19.2362993063228,13.5185936295722,17.22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| ||
|short_description=p5@ARHGDIB | |short_description=p5@ARHGDIB | ||
}} | }} |
Latest revision as of 14:28, 17 September 2015
Short description: | p5@ARHGDIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARHGDIB_5end |
Coexpression cluster: | C623_Dendritic_Neutrophils_Eosinophils_Whole_Macrophage_CD14_Basophils |
Association with transcript: | 0bp_to_ENST00000541380_5end |
EntrezGene: | ARHGDIB |
HGNC: | 679 |
UniProt: | F5H6Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.15e-67 | 98 |
blood island | 2.15e-67 | 98 |
hemolymphoid system | 1.56e-61 | 108 |
bone marrow | 3.55e-52 | 76 |
immune system | 9.83e-51 | 93 |
bone element | 1.64e-46 | 82 |
skeletal element | 3.66e-40 | 90 |
skeletal system | 1.06e-33 | 100 |
lateral plate mesoderm | 2.62e-33 | 203 |
connective tissue | 6.04e-20 | 371 |
musculoskeletal system | 4.87e-16 | 167 |
mesoderm | 5.94e-13 | 315 |
mesoderm-derived structure | 5.94e-13 | 315 |
presumptive mesoderm | 5.94e-13 | 315 |
blood | 8.47e-11 | 15 |
haemolymphatic fluid | 8.47e-11 | 15 |
organism substance | 8.47e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.32e-22 | 51 |
immune system cancer | 8.32e-22 | 51 |
leukemia | 5.90e-17 | 39 |
myeloid leukemia | 1.44e-14 | 31 |