FFCP PHASE1:Hg19::chr13:47471045..47471055,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:47471045..47471055,- to FFCP PHASE1:Hg19::chr13:47471045..47471055,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3356 | |EntrezGene=3356 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5293 | |HGNC=5293 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001vbr.2,uc010acr.2_5end | |||
|cluster_id=chr13:47471045..47471055,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_10_at_HTR2A_5end | |||
|id=chr13:47471045..47471055,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;4.76e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.33e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.25e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.92e-46!34;UBERON:0003528!2.92e-46!34;UBERON:0001869!1.90e-45!32;UBERON:0002619!6.19e-44!22;UBERON:0001950!3.38e-43!20;UBERON:0001893!1.58e-42!34;UBERON:0002780!1.46e-41!41;UBERON:0001890!1.46e-41!41;UBERON:0006240!1.46e-41!41;UBERON:0003080!1.88e-40!42;UBERON:0002791!1.44e-39!33;UBERON:0000956!2.41e-38!25;UBERON:0000203!2.41e-38!25;UBERON:0005743!2.03e-37!86;UBERON:0001017!4.11e-37!82;UBERON:0001049!1.10e-36!57;UBERON:0005068!1.10e-36!57;UBERON:0006241!1.10e-36!57;UBERON:0007135!1.10e-36!57;UBERON:0002616!3.11e-35!59;UBERON:0000073!3.65e-33!94;UBERON:0001016!3.65e-33!94;UBERON:0000955!2.67e-31!69;UBERON:0006238!2.67e-31!69;UBERON:0003056!1.43e-28!61;UBERON:0003075!2.96e-28!86;UBERON:0007284!2.96e-28!86;UBERON:0002346!1.11e-26!90;UBERON:0007023!2.01e-26!115;UBERON:0000200!6.99e-23!6;UBERON:0000153!1.09e-17!129;UBERON:0007811!1.09e-17!129;UBERON:0000033!1.68e-17!123;UBERON:0004121!4.27e-15!169;UBERON:0000924!1.43e-14!173;UBERON:0006601!1.43e-14!173;UBERON:0002021!1.23e-12!5;UBERON:0001872!1.31e-12!5;UBERON:0002771!3.29e-12!3;UBERON:0001871!1.21e-11!7;UBERON:0002308!1.41e-09!9;UBERON:0000125!1.41e-09!9;UBERON:0000064!3.93e-09!219;UBERON:0001870!4.83e-09!2;UBERON:0002360!4.64e-08!2;UBERON:0000094!4.64e-08!2;UBERON:0007645!4.64e-08!2;UBERON:0000025!7.31e-08!194;UBERON:0002148!1.24e-07!2;UBERON:0009662!1.24e-07!2;UBERON:0000475!4.70e-07!365;UBERON:0000349!5.29e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.13e-78;20!UBERON:0002619;1.80e-71;22!UBERON:0000200;1.05e-69;6!UBERON:0000956;4.46e-63;25!UBERON:0000203;4.46e-63;25!UBERON:0001869;2.35e-50;32!UBERON:0001893;1.28e-47;34!UBERON:0002791;1.62e-43;32!UBERON:0003528;5.31e-38;34!UBERON:0002020;5.31e-38;34!UBERON:0001870;5.38e-36;3!UBERON:0002780;1.07e-29;41!UBERON:0001890;1.07e-29;41!UBERON:0002702;8.98e-25;2!UBERON:0002771;2.62e-24;2!UBERON:0002021;7.26e-22;5!UBERON:0001872;1.28e-21;5!UBERON:0000073;6.96e-19;53!UBERON:0002616;6.96e-19;53!UBERON:0000955;4.56e-16;68!UBERON:0001017;3.44e-15;75!UBERON:0002581;4.76e-13;1!UBERON:0002902;4.76e-13;1!UBERON:0002022;4.76e-13;1!UBERON:0009899;4.76e-13;1!UBERON:0007190;4.76e-13;1!UBERON:0001016;4.62e-11;83!UBERON:0001871;1.29e-07;6!UBERON:0002360;3.69e-07;2!UBERON:0000094;3.69e-07;2!UBERON:0005406;3.69e-07;2!UBERON:0010743;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.17e-78,20;UBERON:0002619,1.04e-71,22;UBERON:0000200,7.04e-69,6;UBERON:0000956,2.76e-63,25;UBERON:0000203,2.76e-63,25;UBERON:0001869,2.95e-58,32;UBERON:0001893,7.60e-55,34;UBERON:0002791,1.40e-49,32;UBERON:0003528,1.14e-46,34;UBERON:0002020,1.14e-46,34;UBERON:0002780,1.85e-45,41;UBERON:0001890,1.85e-45,41;UBERON:0003080,1.85e-45,41;UBERON:0006240,1.85e-45,41;UBERON:0001870,4.81e-36,3;UBERON:0000073,5.08e-35,53;UBERON:0002616,5.08e-35,53;UBERON:0001049,4.27e-33,56;UBERON:0005068,4.27e-33,56;UBERON:0006241,4.27e-33,56;UBERON:0007135,4.27e-33,56;UBERON:0000955,5.08e-31,68;UBERON:0006238,5.08e-31,68;UBERON:0003056,2.67e-30,61;UBERON:0001017,7.10e-30,81;UBERON:0001016,8.85e-27,89;UBERON:0002702,1.45e-24,2;UBERON:0002771,5.35e-24,2;UBERON:0003075,3.17e-22,82;UBERON:0007284,3.17e-22,82;UBERON:0002021,3.84e-22,5;UBERON:0001872,1.20e-21,5;UBERON:0002346,3.97e-21,86;UBERON:0007023,2.18e-18,114;UBERON:0010371,3.22e-17,104;UBERON:0004121,2.84e-13,171;UBERON:0000924,2.84e-13,171;UBERON:0006601,2.84e-13,171;UBERON:0002022,2.95e-13,1;UBERON:0010314,3.15e-13,132;UBERON:0002902,3.76e-13,1;UBERON:0009899,3.76e-13,1;UBERON:0007190,4.77e-13,1;UBERON:0002581,9.73e-13,1;UBERON:0011216,1.05e-09,223;UBERON:0000025,1.49e-08,192;UBERON:0001871,1.57e-07,6;UBERON:0005406,3.09e-07,2;UBERON:0002360,4.17e-07,2;UBERON:0000094,4.17e-07,2;UBERON:0010743,4.17e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,1.02341449813341,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,1.29875337426592,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0,0,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58276989889697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,1.51873891645062,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31640907980192,1.22026264901963,1.251909307065,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963438376446893,2.8339315265117,0,1.8460472781668,0.252071696221718,1.45230230174858,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41828927698629,0.781078098613847,1.44680757550829,1.71222687523548,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18390992413128,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,1.02341449813341,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,1.29875337426592,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0,0,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58276989889697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,1.51873891645062,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31640907980192,1.22026264901963,1.251909307065,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963438376446893,2.8339315265117,0,1.8460472781668,0.252071696221718,1.45230230174858,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41828927698629,0.781078098613847,1.44680757550829,1.71222687523548,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18390992413128,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@HTR2A | |||
}} | }} |
Latest revision as of 14:27, 17 September 2015
Short description: | p10@HTR2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HTR2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_uc001vbr.2, uc010acr.2_5end |
EntrezGene: | HTR2A |
HGNC: | 5293 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.33e-13 | 1 |