FFCP PHASE1:Hg19::chr12:15103621..15103648,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:15103621..15103648,- to FFCP PHASE1:Hg19::chr12:15103621..15103648,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=397 | |EntrezGene=397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=679 | |HGNC=679 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536592_5end | |||
|cluster_id=chr12:15103621..15103648,- | |||
|description=CAGE_peak_11_at_ARHGDIB_5end | |||
|id=chr12:15103621..15103648,- | |||
|ontology_enrichment_celltype=CL:0000037!1.02e-43!172;CL:0000566!1.02e-43!172;CL:0000988!1.71e-43!182;CL:0002032!5.10e-43!165;CL:0000837!5.10e-43!165;CL:0000738!1.24e-39!140;CL:0002031!3.34e-35!124;CL:0002087!3.43e-34!119;CL:0000763!5.63e-24!112;CL:0000049!5.63e-24!112;CL:0000766!4.81e-19!76;CL:0000839!8.65e-18!70;CL:0000542!1.63e-17!53;CL:0000051!1.63e-17!53;CL:0000838!2.44e-17!52;CL:0000557!3.94e-17!71;CL:0002057!2.46e-15!42;CL:0002194!7.72e-15!63;CL:0000576!7.72e-15!63;CL:0000040!7.72e-15!63;CL:0000559!7.72e-15!63;CL:0002009!1.40e-14!65;CL:0000860!2.01e-13!45;CL:0000945!2.91e-12!24;CL:0000826!2.91e-12!24;CL:0000134!2.90e-08!358;CL:0002320!1.95e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.75e-10;6!CL:0000945;1.13e-09;24!CL:0000097;1.92e-08;5!CL:0000775;7.23e-08;3!CL:0000473;7.69e-08;39!CL:0000234;7.69e-08;39!CL:0000542;2.67e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.00e-25,177;CL:0000738,1.88e-24,136;CL:0000037,5.20e-23,168;CL:0002032,3.07e-22,161;CL:0000837,3.07e-22,161;CL:0002031,1.02e-20,120;CL:0002087,5.03e-19,115;CL:0000838,1.39e-12,52;CL:0000542,3.01e-12,53;CL:0000051,3.01e-12,53;CL:0000766,1.11e-11,72;CL:0000763,9.80e-11,108;CL:0000049,9.80e-11,108;CL:0000235,3.79e-10,6;CL:0000945,8.94e-10,24;CL:0000826,8.94e-10,24;CL:0000839,1.81e-09,66;CL:0000557,2.96e-09,67;CL:0000097,2.13e-08,5;CL:0002028,2.13e-08,5;CL:0000775,3.52e-08,3;CL:0000473,5.90e-07,48;CL:0000234,5.90e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000051;2.67e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!1.05e-08!51;DOID:0060083!1.05e-08!51;DOID:1240!6.49e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.92e-26!102;UBERON:0003061!4.92e-26!102;UBERON:0002193!2.55e-25!112;UBERON:0003081!1.09e-15!216;UBERON:0002371!6.94e-14!80;UBERON:0000178!1.06e-13!15;UBERON:0000179!1.06e-13!15;UBERON:0000463!1.06e-13!15;UBERON:0001474!1.12e-11!86;UBERON:0002405!1.45e-10!115;UBERON:0004765!2.59e-08!101;UBERON:0001434!2.59e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.39e-29;15!UBERON:0000179;3.39e-29;15!UBERON:0000463;3.39e-29;15!UBERON:0002390;4.83e-13;32!UBERON:0002193;1.33e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.20e-29,15;UBERON:0000179,1.20e-29,15;UBERON:0000463,1.20e-29,15;UBERON:0002390,4.97e-21,98;UBERON:0003061,4.97e-21,98;UBERON:0002193,1.73e-19,108;UBERON:0003081,7.04e-10,203;UBERON:0002371,1.36e-07,76;UBERON:0002405,6.54e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,2.63766978228454,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,2.67446920117829,4.67973359864691,3.93553906568396,0.393364276848904,0,0.309632246632152,0,0,0,0.232401601740905,1.13735385989937,0,0.553995408531877,0.401088894940283,0.217010870715852,0.447830948479849,0,0.257575567634187,0.726991193897824,1.13362783106643,1.21292030593908,0.929716147622738,0.411167888021826,0.619412741790207,0.863077176966451,1.2808035326455,0.236482229888585,1.03423704220986,1.29096936716765,0,0.376484679085209,0.545812300115692,0.898893937780338,0.918251677112708,0.641858054152187,1.27867425159808,0.989553900560148,0.797854630486527,0,0.290209238628584,1.13477044938228,0,0.75374599577023,0.521482918420201,0,0,0,0.949387162322653,0.845021145247767,0.637812899895131,0.419317291016752,0.673971786878971,1.05123824989054,1.12507910687956,1.71007646244749,0.99458338599545,0.730656615058536,1.75996244461323,0.546138611262131,0,0.426730222566507,0,1.14950487990897,1.32208974556972,0.954053754535364,0.569212969109448,0.587237189370939,1.14681968437569,2.64342657158052,0,0.790152254325231,0,1.17903228824749,1.85041349099558,0.83593247695339,1.30368906653436,0.473447805734733,1.94826728407911,1.00269411196656,1.76763544484902,1.32920336750173,0.270803863765016,0.640456598628376,1.69077151827842,1.47994114143309,0.552700035571697,1.15921234294021,0.593146252648242,2.1403266247177,0,0.566546713487831,0,2.40539211837841,0.759059076058509,0.637130828648193,0,0,0.301150238155546,0.127986611154418,0,0.710331756132051,0,0.604820229674197,1.33720097891754,1.01377082717959,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,1.0447784237956,1.06366368415092,0,0,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0,0.550236083880135,0.417989933073621,0,0,0.33472061276467,0,1.52054421143703,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0.311211035399766,0.269421344139376,0.653847612453835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0,0,0,0.738651018262192,3.51006397708857,2.22946743433092,0,0.16798212819886,0.141775097242386,0,0,0,0.492663237895943,1.14462964217194,2.90259361757081,4.03535869567492,3.66103056936502,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0.672510863961164,0.394061520403854,0.431255149719035,0.898401253958239,0.254094624222463,0,0,0,0,1.49801404789436,14.9580729602012,1.65766205374414,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,1.17400313583789,0.303127571446259,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.385076685522074,0,0,0,2.27466768141793,0.680374821106063,0,0,0,0,0,0.831076008928724,0,0.438519753291869,0,0,0,0,0.206082023295445,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808729926293264,0,0,0,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0.811641507850816,0.92947049429925,0.281695602532241,0,0,1.78335525740625,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5968189200182,4.58782324285425,2.27858874869665,1.90585420366231,1.23408681925858,1.94541993357815,2.70015718619057,3.17250070517708,0,0,0.735120647943095,0.185803175125719,0.144269212976445,0.0711418433484141,0.478278818186467,0.59873811429845,0.766021480529467,0.635020748171649,1.62310970137278,0.842391534340376,0.456469358066384,1.56679895773023,0,0.677167111206413,0.802940375518498,1.00899853595524,0.425846237690326,1.37402137902306,0,0,0.166849141711909,0.390776190804081,0,0,0.811367035427949,0.99921590399346,0,0,0.293016358543788,0,0.111443384277478,0,0.47748896947538,0.593929361665277,0,0,0.281338832821026,0,0,0.211125408127993,0.19924798825107,0.828851746593443,0,1.02268682502155,1.72318727645497,0.311039587661807,0.0898683511473268,0,0,0.197286811273867,7.18449277040819,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0.583209226766509,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.108647371922008,1.5950057986596,0.183195186803725,3.19820865611181,1.02193298195737,1.41282230755522,0.332423363800313,0,0,0,0,0.158936578980379,0,0.326465616318295,0,0,0,0,0,1.77912677208373,2.10058696209055,2.29728288912002,0,0,0,0.364909578431332,0,0,0,0,0,0.252746318513952,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.05154941711726,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.26446520348538,0,0,0.5339370628384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| ||
|short_description=p11@ARHGDIB | |||
}} | }} |
Latest revision as of 14:26, 17 September 2015
Short description: | p11@ARHGDIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ARHGDIB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536592_5end |
EntrezGene: | ARHGDIB |
HGNC: | 679 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.00e-25 | 177 |
leukocyte | 1.88e-24 | 136 |
hematopoietic stem cell | 5.20e-23 | 168 |
hematopoietic oligopotent progenitor cell | 3.07e-22 | 161 |
hematopoietic multipotent progenitor cell | 3.07e-22 | 161 |
hematopoietic lineage restricted progenitor cell | 1.02e-20 | 120 |
nongranular leukocyte | 5.03e-19 | 115 |
lymphoid lineage restricted progenitor cell | 1.39e-12 | 52 |
lymphocyte | 3.01e-12 | 53 |
common lymphoid progenitor | 3.01e-12 | 53 |
myeloid leukocyte | 1.11e-11 | 72 |
myeloid cell | 9.80e-11 | 108 |
common myeloid progenitor | 9.80e-11 | 108 |
macrophage | 3.79e-10 | 6 |
lymphocyte of B lineage | 8.94e-10 | 24 |
pro-B cell | 8.94e-10 | 24 |
myeloid lineage restricted progenitor cell | 1.81e-09 | 66 |
granulocyte monocyte progenitor cell | 2.96e-09 | 67 |
mast cell | 2.13e-08 | 5 |
basophil mast progenitor cell | 2.13e-08 | 5 |
neutrophil | 3.52e-08 | 3 |
defensive cell | 5.90e-07 | 48 |
phagocyte | 5.90e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
blood | 1.20e-29 | 15 |
haemolymphatic fluid | 1.20e-29 | 15 |
organism substance | 1.20e-29 | 15 |
hematopoietic system | 4.97e-21 | 98 |
blood island | 4.97e-21 | 98 |
hemolymphoid system | 1.73e-19 | 108 |
lateral plate mesoderm | 7.04e-10 | 203 |
bone marrow | 1.36e-07 | 76 |
immune system | 6.54e-07 | 93 |