FFCP PHASE1:Hg19::chr19:36393354..36393363,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:36393354..36393363,+ to FFCP PHASE1:Hg19::chr19:36393354..36393363,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10870 | |EntrezGene=10870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16977 | |HGNC=16977 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBK5 | |UniProt=Q9UBK5 | ||
|association_with_transcript=-18bp_to_ENST00000246551,ENST00000437550,NM_001007469,NM_014266,uc002ock.1,uc002ocl.1_5end | |||
|cluster_id=chr19:36393354..36393363,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_4_at_HCST_5end | |||
|id=chr19:36393354..36393363,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.38e-79!172;CL:0000566!5.38e-79!172;CL:0002032!3.00e-73!165;CL:0000837!3.00e-73!165;CL:0000988!5.94e-71!182;CL:0000738!4.40e-68!140;CL:0002031!3.14e-56!124;CL:0002087!1.62e-55!119;CL:0000763!7.22e-47!112;CL:0000049!7.22e-47!112;CL:0000766!1.38e-36!76;CL:0000839!5.38e-32!70;CL:0000557!6.44e-32!71;CL:0002009!1.91e-30!65;CL:0002194!1.48e-29!63;CL:0000576!1.48e-29!63;CL:0000040!1.48e-29!63;CL:0000559!1.48e-29!63;CL:0002057!1.48e-25!42;CL:0000860!1.41e-22!45;CL:0000542!5.16e-22!53;CL:0000051!5.16e-22!53;CL:0000838!2.07e-21!52;CL:0000084!1.14e-18!25;CL:0000827!1.14e-18!25;CL:0000134!5.47e-17!358;CL:0000791!5.61e-16!18;CL:0000789!5.61e-16!18;CL:0002420!5.61e-16!18;CL:0002419!5.61e-16!18;CL:0000790!5.61e-16!18;CL:0002320!1.25e-15!365;CL:0000219!2.57e-12!390;CL:0000625!5.74e-11!11;CL:0000048!1.18e-07!430;CL:0000451!1.24e-07!10;CL:0000034!1.99e-07!444;CL:0002393!5.56e-07!9;CL:0002397!5.56e-07!9;CL:0000723!5.68e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.05e-27;39!CL:0000234;7.05e-27;39!CL:0000860;1.66e-25;33!CL:0002057;1.66e-25;33!CL:0000084;1.11e-24;25!CL:0000576;7.81e-23;48!CL:0000791;2.88e-22;18!CL:0000789;2.88e-22;18!CL:0002419;2.88e-22;18!CL:0000766;3.25e-22;69!CL:0002087;2.88e-20;104!CL:0000738;1.17e-18;136!CL:0000763;7.35e-18;100!CL:0000988;1.27e-15;177!CL:0000625;4.25e-15;11!CL:0000542;8.99e-15;53!CL:0000451;5.00e-09;10!CL:0000235;5.29e-08;6!CL:0000219;5.75e-08;193!CL:0000094;8.49e-08;8!CL:0000624;1.32e-07;6!CL:0002393;3.13e-07;6!CL:0002397;3.13e-07;6!CL:0000840;3.88e-07;5!CL:0000990;6.57e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.12e-103,168;CL:0000988,9.51e-96,177;CL:0002032,3.63e-95,161;CL:0000837,3.63e-95,161;CL:0000738,8.56e-95,136;CL:0002087,4.25e-78,115;CL:0002031,6.66e-77,120;CL:0000763,1.03e-61,108;CL:0000049,1.03e-61,108;CL:0000766,3.29e-55,72;CL:0000557,1.39e-48,67;CL:0002009,2.70e-46,61;CL:0000839,2.96e-46,66;CL:0002194,5.08e-45,59;CL:0000576,5.08e-45,59;CL:0000040,5.08e-45,59;CL:0000559,5.08e-45,59;CL:0000473,1.09e-42,48;CL:0000234,1.09e-42,48;CL:0000860,4.33e-36,42;CL:0002057,4.33e-36,42;CL:0000542,2.02e-27,53;CL:0000051,2.02e-27,53;CL:0000134,3.69e-27,354;CL:0000838,1.42e-26,52;CL:0002320,7.64e-26,361;CL:0000084,8.84e-25,25;CL:0000827,8.84e-25,25;CL:0000791,2.79e-22,18;CL:0000789,2.79e-22,18;CL:0002420,2.79e-22,18;CL:0002419,2.79e-22,18;CL:0000790,2.79e-22,18;CL:0000219,2.96e-21,386;CL:0000048,8.90e-16,427;CL:0000034,1.80e-15,441;CL:0000625,4.50e-15,11;CL:0000723,4.89e-15,433;CL:0002393,2.34e-09,9;CL:0002397,2.34e-09,9;CL:0000451,5.47e-09,10;CL:0000235,5.74e-08,6;CL:0000094,9.02e-08,8;CL:0000624,1.19e-07,6;CL:0000840,3.34e-07,5;CL:0001029,3.34e-07,5;CL:0000990,7.05e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.28e-26;42!CL:0000790;2.88e-22;18!CL:0000049;5.15e-17;108!CL:0000051;8.99e-15;53 | |||
|ontology_enrichment_disease=DOID:1240!3.58e-13!39;DOID:2531!5.45e-13!51;DOID:0060083!5.45e-13!51;DOID:8692!3.64e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.98e-11;39!DOID:8692;5.22e-09;31!DOID:2531;2.04e-08;51!DOID:0060083;2.04e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,8.11e-14,39;DOID:2531,5.83e-13,51;DOID:0060083,5.83e-13,51;DOID:8692,1.43e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.90e-34!102;UBERON:0003061!1.90e-34!102;UBERON:0002193!2.26e-30!112;UBERON:0002371!2.77e-26!80;UBERON:0001474!1.44e-22!86;UBERON:0002405!5.07e-19!115;UBERON:0004765!3.29e-17!101;UBERON:0001434!3.29e-17!101;UBERON:0002384!1.20e-14!375;UBERON:0007023!9.51e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.38e-08;15!UBERON:0000179;7.38e-08;15!UBERON:0000463;7.38e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.35e-53,98;UBERON:0003061,2.35e-53,98;UBERON:0002193,9.27e-49,108;UBERON:0002371,1.05e-41,76;UBERON:0002405,2.65e-41,93;UBERON:0001474,4.43e-37,82;UBERON:0004765,6.64e-32,90;UBERON:0001434,1.20e-26,100;UBERON:0002384,1.14e-24,371;UBERON:0003081,5.49e-14,203;UBERON:0002204,3.92e-09,167;UBERON:0000178,8.23e-08,15;UBERON:0000179,8.23e-08,15;UBERON:0000463,8.23e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8272960126742,3.03772180964799,3.38456359648821,4.32700704533794,11.1310525448192,6.50227717927519,0,0,0,1.70427841276664,1.42169232487422,1.76160263600908,5.53995408531877,11.0299446108578,7.59538047505481,1.79132379391939,3.2389366601898,0.77272670290256,4.9435401185052,5.66813915533214,3.15359279544161,7.67015821788759,2.46700732813095,4.33588919253145,11.507695692886,4.35473201099471,6.14853797710322,5.17118521104928,6.45484683583826,1.35426486594342,5.64727018627814,4.63940455098338,4.71919317334678,11.0190201253525,3.53021929783703,5.11469700639233,7.91643120448119,4.78712778291916,3.40979800426155,8.9964863974861,5.6738522469114,4.35975574296902,5.7787193009051,6.25779502104242,6.5156653411535,8.47559303686716,2.57794345191295,7.27863491114034,7.6051903072299,7.86635909870661,9.22498040236854,8.42464733598713,6.90813707070929,6.91120022797445,5.70025487482497,2.38700012638908,6.39324538176219,3.51992488922645,0.546138611262131,0.889509253863555,1.70692089026603,0,1.14950487990897,0,0,0,1.76171156811282,1.14681968437569,1.32171328579026,2.80254281490768,1.58030450865046,5.90129310341499,9.82526906872912,9.86887195197644,6.8546463110178,12.71096839871,12.3096429491031,19.4826728407911,12.5893816280246,7.36514768687093,8.19675409959398,6.77009659412539,11.5282187753108,12.4856973657483,26.1456268319845,33.1620021343018,18.2575944013083,9.78691316869599,6.95606153033254,24.0431704751447,14.2769771798933,16.4784812248826,8.93431358254838,13.1570239850141,25.1666677316036,29.9498388773953,37.0676297334866,12.0460095262218,18.8140318396995,26.2354525759926,17.7582939033013,30.3817358860787,15.1205057418549,20.5928950753301,17.5237528698187,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.654895377488563,0,0,12.9818957461873,10.6219139752553,23.5335590118391,12.8784937124885,16.5878524126237,11.1437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,11.6334079244498,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.635795703478686,0.300091096084402,0.412210116953756,0,0.18611685633159,0,0.194874010322397,0.504867548488229,0.184099797284599,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85609409356116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8335482678455,29.9525459378224,26.6049780496824,0,0,0,0,0,0,6.89728533054321,3.96217953059517,2.90259361757081,1.15295962733569,1.13618190083742,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4598049025905,5.02257091432126,6.32501818449095,0,0,0,0.289562613335158,0.821905290201534,0,18.0457081829579,15.3683992957503,16.6033232641828,12.3209314828558,0,0,0,0,0,2.24702107184155,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71809722777571,10.138567438475,12.0602140317892,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.618246069886334,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.340906509664404,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,4.05958087385735,0.764637207142375,9.68400218196076,6.67048971281809,8.22724546172388,4.53931317834902,6.48037724685738,10.3106272918255,0.213648142254946,0,0,6.50311112940016,0,1.56512055366511,1.4348364545594,1.79621434289535,3.83010740264733,4.44514523720154,0.649243880549111,11.7934814807653,7.98821376616173,2.97691801968744,5.01268954180134,0.169291777801603,11.241165257259,4.43959355820305,0,18.5492886168113,0.614481528616916,2.23676107892416,1.00109485027145,6.25241905286529,11.6930593036002,0,4.32729085561573,0.66614393599564,2.81974010175699,0,1.75809815126273,0,4.23484860254418,0,0,0.296964680832639,0,0,0.422008249231538,0,0.329607748453519,0,0.796991953004279,3.31540698637377,0,0,3.81562896929315,0,0,0,9.71987503431056,0.0986434056369336,9.57932369387759,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.591095237907095,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,1.06606955203727,12.2631957834884,2.5116841023204,1.99454018280188,0,0.392125068635479,0.503464760927528,0,2.38404868470568,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0.802577647298789,0.468528891450678,0.182454789215666,0,0,0,1.20990716048664,0,1.39010475182674,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,2.23581842213102,0,0,0,0.193978032976839,0,0.90392296312213,0,0,0.189932387867636,0,0,0.85381197895741,0,0,0,3.60349495510126,0,0,0,0.543616824294456,0.313808538937,0,0,0.600420288709789,0.821432273351958,0,0,6.57218385698286,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0.0787831823072236,0,0.0674035438541849,0,0.084673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|short_description=p4@HCST | |||
}} | }} |
Latest revision as of 14:24, 17 September 2015
Short description: | p4@HCST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HCST_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -18bp_to_ENST00000246551, ENST00000437550, NM_001007469, NM_014266, uc002ock.1, uc002ocl.1_5end |
EntrezGene: | HCST |
HGNC: | 16977 |
UniProt: | Q9UBK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.35e-53 | 98 |
blood island | 2.35e-53 | 98 |
hemolymphoid system | 9.27e-49 | 108 |
bone marrow | 1.05e-41 | 76 |
immune system | 2.65e-41 | 93 |
bone element | 4.43e-37 | 82 |
skeletal element | 6.64e-32 | 90 |
skeletal system | 1.20e-26 | 100 |
connective tissue | 1.14e-24 | 371 |
lateral plate mesoderm | 5.49e-14 | 203 |
musculoskeletal system | 3.92e-09 | 167 |
blood | 8.23e-08 | 15 |
haemolymphatic fluid | 8.23e-08 | 15 |
organism substance | 8.23e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.11e-14 | 39 |
hematologic cancer | 5.83e-13 | 51 |
immune system cancer | 5.83e-13 | 51 |
myeloid leukemia | 1.43e-09 | 31 |