FFCP PHASE1:Hg19::chr3:195306346..195306361,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347 | |EntrezGene=347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=612 | |HGNC=612 | ||
|TSSclassifier=strong | |||
|UniProt=P05090 | |UniProt=P05090 | ||
|association_with_transcript=-14bp_to_BT019860,BT019861,CR456838,CR541773,CU675645,DQ892668,DQ896124_5end | |association_with_transcript=-14bp_to_BT019860,BT019861,CR456838,CR541773,CU675645,DQ892668,DQ896124_5end | ||
|cluster_id=chr3:195306346..195306361,- | |||
|description=CAGE_peak_8_at_APOD_5end | |description=CAGE_peak_8_at_APOD_5end | ||
|id=chr3:195306346..195306361,- | |id=chr3:195306346..195306361,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.64e-08;3!UBERON:0003057;8.64e-08;3!UBERON:0006601;2.49e-07;82!UBERON:0003056;3.52e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.79e-71!115;UBERON:0001049!2.40e-22!57;UBERON:0005068!2.40e-22!57;UBERON:0006241!2.40e-22!57;UBERON:0007135!2.40e-22!57;UBERON:0002616!1.46e-19!59;UBERON:0001017!1.69e-18!82;UBERON:0005743!2.88e-18!86;UBERON:0000073!2.34e-17!94;UBERON:0001016!2.34e-17!94;UBERON:0000955!2.37e-17!69;UBERON:0006238!2.37e-17!69;UBERON:0003075!2.70e-17!86;UBERON:0007284!2.70e-17!86;UBERON:0002346!5.20e-17!90;UBERON:0003080!4.87e-14!42;UBERON:0000153!2.26e-13!129;UBERON:0007811!2.26e-13!129;UBERON:0002780!5.45e-13!41;UBERON:0001890!5.45e-13!41;UBERON:0006240!5.45e-13!41;UBERON:0000033!2.04e-12!123;UBERON:0000924!4.01e-12!173;UBERON:0006601!4.01e-12!173;UBERON:0004121!4.24e-12!169;UBERON:0002298!8.13e-12!8;UBERON:0002020!1.38e-10!34;UBERON:0003528!1.38e-10!34;UBERON:0001893!1.51e-10!34;UBERON:0003076!5.10e-10!15;UBERON:0003057!5.10e-10!15;UBERON:0002791!8.36e-10!33;UBERON:0004111!8.95e-10!241;UBERON:0000477!1.48e-09!286;UBERON:0001869!9.85e-09!32;UBERON:0002619!1.16e-08!22;UBERON:0003056!1.72e-08!61;UBERON:0004732!9.29e-08!13;UBERON:0000956!2.96e-07!25;UBERON:0000203!2.96e-07!25;UBERON:0000025!3.83e-07!194;UBERON:0001950!7.49e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.20e-11;114!UBERON:0001905;3.15e-11;2!UBERON:0002757;3.15e-11;2!UBERON:0010134;3.15e-11;2!UBERON:0005408;3.15e-11;2!UBERON:0001899;3.15e-11;2!UBERON:0002240;8.64e-08;3!UBERON:0005174;8.64e-08;3!UBERON:0001137;8.64e-08;3!UBERON:0004151;1.05e-07;3!UBERON:0001896;3.52e-07;3!UBERON:0006947;3.52e-07;3!UBERON:0005290;3.52e-07;3!UBERON:0004054;3.52e-07;3!UBERON:0003135;4.34e-07;11!UBERON:0001894;6.61e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.81e-42,114;UBERON:0001905,3.01e-11,2;UBERON:0002757,3.01e-11,2;UBERON:0010134,3.01e-11,2;UBERON:0005408,3.01e-11,2;UBERON:0001899,3.01e-11,2;UBERON:0010314,9.79e-09,132;UBERON:0001016,2.09e-08,89;UBERON:0003075,2.39e-08,82;UBERON:0007284,2.39e-08,82;UBERON:0001017,2.72e-08,81;UBERON:0001049,3.96e-08,56;UBERON:0005068,3.96e-08,56;UBERON:0006241,3.96e-08,56;UBERON:0007135,3.96e-08,56;UBERON:0002346,7.80e-08,86;UBERON:0002240,8.80e-08,3;UBERON:0005174,8.80e-08,3;UBERON:0001137,8.80e-08,3;UBERON:0004151,1.04e-07,3;UBERON:0006947,1.93e-07,3;UBERON:0004054,1.93e-07,3;UBERON:0003135,2.87e-07,11;UBERON:0001896,4.83e-07,3;UBERON:0005290,4.83e-07,3;UBERON:0010096,4.83e-07,3;UBERON:0001894,5.04e-07,7;UBERON:0006222,5.04e-07,7 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,0.872338524100369,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0.760272105718513,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0,0,0,0,1.36221684880438,0.576175924479999,0,0,0,1.34503812496621,0,0,0,0.408308342509787,0,0.929932030581889,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0.308482478109971,0.901029173531752,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56731081233197,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.996239941255349,0,0,0,0,0,0,0,0,1.57829449019094,0,0,0.969332746095218,1.11321717794222,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.886642856860642,0.219385397153973,0,0,0.923403102045565,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,1.48260564340311,4.57186574102061,5.22109747527277,0.943615861729479,0,1.87411556580271,0.182454789215666,0,0,1.57833761139756,0,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.35784623083787,0,1.12990370390266,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.279282401272254,0.687481272035051,2.15361907373044,0.599037001496973,1.28767814440971,2.4548860318606,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,3.97255182219259,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.66116300871345,0,0,1.17466153824464,0,0.414239055347196,0.496166021811951,0,0,0,0,0.7520696820681,0.919036730290385,0,0,0,2.07444650333337,0.3755727921195,1.14681839138014,1.33114861844223,0.745156835296601,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.638535436228605,1.43581454968528,0,0.484100767249525,0.968853873791107,1.42769420259154,0,0,0,0,0,0,0,0.451261970095544,0,0.781514011233092,0.261906694481422,0,0,0.405225507710368,0,1.03343398250592,0.443910671357348,0,0,2.97726707033577,0.527613733078862,0,4.28561468702629,2.69026977775059,0,0,0,0,0,0.747667062745149,0.328863867814245,0,0,0.941917114206168,0,0,0,0,0,1.07214816264985,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,1.69354820076372,0,0,0,0,0,0,3.88457302312737,3.69586104682489,0,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,0,0.490296643507811,0.942706188406504,5.30032861210352,2.37637120261669,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0.730336388246517,0.458729283404541,1.57673541466596,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,1.43979526614655,0.267964130156178,0,0.517164979309476,0.852935927603924,0,0.0645889098360061,0.248298857183432,0,1.84576759006678,0,1.52401723527873,0,0.134704106029175,1.14755528628282,0.332660356546013,0,0,0,0,0,0.366724332548599,0.406896178315738,3.32878387092756,0.603821380773079,0 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|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,0.872338524100369,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0.760272105718513,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0,0,0,0,1.36221684880438,0.576175924479999,0,0,0,1.34503812496621,0,0,0,0.408308342509787,0,0.929932030581889,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0.308482478109971,0.901029173531752,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56731081233197,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.996239941255349,0,0,0,0,0,0,0,0,1.57829449019094,0,0,0.969332746095218,1.11321717794222,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.886642856860642,0.219385397153973,0,0,0.923403102045565,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,1.48260564340311,4.57186574102061,5.22109747527277,0.943615861729479,0,1.87411556580271,0.182454789215666,0,0,1.57833761139756,0,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.35784623083787,0,1.12990370390266,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.279282401272254,0.687481272035051,2.15361907373044,0.599037001496973,1.28767814440971,2.4548860318606,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,3.97255182219259,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.66116300871345,0,0,1.17466153824464,0,0.414239055347196,0.496166021811951,0,0,0,0,0.7520696820681,0.919036730290385,0,0,0,2.07444650333337,0.3755727921195,1.14681839138014,1.33114861844223,0.745156835296601,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.638535436228605,1.43581454968528,0,0.484100767249525,0.968853873791107,1.42769420259154,0,0,0,0,0,0,0,0.451261970095544,0,0.781514011233092,0.261906694481422,0,0,0.405225507710368,0,1.03343398250592,0.443910671357348,0,0,2.97726707033577,0.527613733078862,0,4.28561468702629,2.69026977775059,0,0,0,0,0,0.747667062745149,0.328863867814245,0,0,0.941917114206168,0,0,0,0,0,1.07214816264985,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,1.69354820076372,0,0,0,0,0,0,3.88457302312737,3.69586104682489,0,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,0,0.490296643507811,0.942706188406504,5.30032861210352,2.37637120261669,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0.730336388246517,0.458729283404541,1.57673541466596,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,1.43979526614655,0.267964130156178,0,0.517164979309476,0.852935927603924,0,0.0645889098360061,0.248298857183432,0,1.84576759006678,0,1.52401723527873,0,0.134704106029175,1.14755528628282,0.332660356546013,0,0,0,0,0,0.366724332548599,0.406896178315738,3.32878387092756,0.603821380773079,0 | ||
|short_description=p8@APOD | |short_description=p8@APOD | ||
}} | }} |
Latest revision as of 14:16, 17 September 2015
Short description: | p8@APOD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_APOD_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_BT019860, BT019861, CR456838, CR541773, CU675645, DQ892668, DQ896124_5end |
EntrezGene: | APOD |
HGNC: | 612 |
UniProt: | P05090 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.81e-42 | 114 |
pineal body | 3.01e-11 | 2 |
regional part of epithalamus | 3.01e-11 | 2 |
secretory circumventricular organ | 3.01e-11 | 2 |
circumventricular organ | 3.01e-11 | 2 |
epithalamus | 3.01e-11 | 2 |
structure with developmental contribution from neural crest | 9.79e-09 | 132 |
nervous system | 2.09e-08 | 89 |
neural plate | 2.39e-08 | 82 |
presumptive neural plate | 2.39e-08 | 82 |
central nervous system | 2.72e-08 | 81 |
neural tube | 3.96e-08 | 56 |
neural rod | 3.96e-08 | 56 |
future spinal cord | 3.96e-08 | 56 |
neural keel | 3.96e-08 | 56 |
neurectoderm | 7.80e-08 | 86 |
spinal cord | 8.80e-08 | 3 |
dorsal region element | 8.80e-08 | 3 |
dorsum | 8.80e-08 | 3 |
cardiac chamber | 1.04e-07 | 3 |
male genital duct | 1.93e-07 | 3 |
internal male genitalia | 1.93e-07 | 3 |
male reproductive organ | 2.87e-07 | 11 |
medulla oblongata | 4.83e-07 | 3 |
myelencephalon | 4.83e-07 | 3 |
future myelencephalon | 4.83e-07 | 3 |
diencephalon | 5.04e-07 | 7 |
future diencephalon | 5.04e-07 | 7 |