FFCP PHASE1:Hg19::chr4:3372015..3372020,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6002 | |EntrezGene=6002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9994 | |HGNC=9994 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=102bp_to_ENST00000506998_5end | |association_with_transcript=102bp_to_ENST00000506998_5end | ||
|cluster_id=chr4:3372015..3372020,+ | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_33_at_RGS12_5end | |description=CAGE_peak_33_at_RGS12_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!1.92e-16!42;CL:0000860!3.72e-15!45;CL:0002009!5.32e-13!65;CL:0000557!1.23e-11!71;CL:0001014!4.35e-11!2;CL:0001016!4.35e-11!2;CL:0002194!8.01e-10!63;CL:0000576!8.01e-10!63;CL:0000040!8.01e-10!63;CL:0000559!8.01e-10!63;CL:0000766!4.40e-09!76;CL:0002393!1.32e-08!9;CL:0002397!1.32e-08!9;CL:0000839!1.38e-08!70;CL:0000763!2.86e-07!112;CL:0000049!2.86e-07!112;CL:0000842!4.39e-07!3;CL:0000738!7.28e-07!140 | |ontology_enrichment_celltype=CL:0002057!1.92e-16!42;CL:0000860!3.72e-15!45;CL:0002009!5.32e-13!65;CL:0000557!1.23e-11!71;CL:0001014!4.35e-11!2;CL:0001016!4.35e-11!2;CL:0002194!8.01e-10!63;CL:0000576!8.01e-10!63;CL:0000040!8.01e-10!63;CL:0000559!8.01e-10!63;CL:0000766!4.40e-09!76;CL:0002393!1.32e-08!9;CL:0002397!1.32e-08!9;CL:0000839!1.38e-08!70;CL:0000763!2.86e-07!112;CL:0000049!2.86e-07!112;CL:0000842!4.39e-07!3;CL:0000738!7.28e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0001014;3.61e-34;2!CL:0001016;3.61e-34;2!CL:0000453;1.40e-14;5!CL:0000840;2.19e-12;5!CL:0000990;1.04e-08;8!CL:0000451;2.32e-07;10 | |ontology_enrichment_celltype_v019=CL:0001014;3.61e-34;2!CL:0001016;3.61e-34;2!CL:0000453;1.40e-14;5!CL:0000840;2.19e-12;5!CL:0000990;1.04e-08;8!CL:0000451;2.32e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.61e-34,2;CL:0001016,3.61e-34,2;CL:0000453,1.40e-14,5;CL:0000840,2.19e-12,5;CL:0001029,2.19e-12,5;CL:0000990,1.04e-08,8;CL:0000451,2.32e-07,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!1.19e-18!6;UBERON:0002619!5.72e-18!22;UBERON:0001950!5.40e-16!20;UBERON:0000956!1.12e-15!25;UBERON:0000203!1.12e-15!25;UBERON:0001869!1.94e-14!32;UBERON:0002771!3.50e-14!3;UBERON:0001871!5.35e-14!7;UBERON:0002020!1.53e-13!34;UBERON:0003528!1.53e-13!34;UBERON:0001893!1.72e-13!34;UBERON:0002791!1.51e-11!33;UBERON:0002780!6.95e-11!41;UBERON:0001890!6.95e-11!41;UBERON:0006240!6.95e-11!41;UBERON:0002390!9.18e-11!102;UBERON:0003061!9.18e-11!102;UBERON:0002193!1.07e-10!112;UBERON:0003080!1.39e-10!42;UBERON:0001474!2.12e-10!86;UBERON:0001049!2.38e-10!57;UBERON:0005068!2.38e-10!57;UBERON:0006241!2.38e-10!57;UBERON:0007135!2.38e-10!57;UBERON:0002371!5.66e-10!80;UBERON:0002616!6.46e-10!59;UBERON:0004765!1.42e-09!101;UBERON:0001434!1.42e-09!101;UBERON:0001017!7.80e-09!82;UBERON:0005743!2.72e-08!86;UBERON:0000955!5.62e-08!69;UBERON:0006238!5.62e-08!69;UBERON:0002405!5.87e-08!115;UBERON:0000073!3.07e-07!94;UBERON:0001016!3.07e-07!94;UBERON:0003075!3.72e-07!86;UBERON:0007284!3.72e-07!86 | |ontology_enrichment_uberon=UBERON:0000200!1.19e-18!6;UBERON:0002619!5.72e-18!22;UBERON:0001950!5.40e-16!20;UBERON:0000956!1.12e-15!25;UBERON:0000203!1.12e-15!25;UBERON:0001869!1.94e-14!32;UBERON:0002771!3.50e-14!3;UBERON:0001871!5.35e-14!7;UBERON:0002020!1.53e-13!34;UBERON:0003528!1.53e-13!34;UBERON:0001893!1.72e-13!34;UBERON:0002791!1.51e-11!33;UBERON:0002780!6.95e-11!41;UBERON:0001890!6.95e-11!41;UBERON:0006240!6.95e-11!41;UBERON:0002390!9.18e-11!102;UBERON:0003061!9.18e-11!102;UBERON:0002193!1.07e-10!112;UBERON:0003080!1.39e-10!42;UBERON:0001474!2.12e-10!86;UBERON:0001049!2.38e-10!57;UBERON:0005068!2.38e-10!57;UBERON:0006241!2.38e-10!57;UBERON:0007135!2.38e-10!57;UBERON:0002371!5.66e-10!80;UBERON:0002616!6.46e-10!59;UBERON:0004765!1.42e-09!101;UBERON:0001434!1.42e-09!101;UBERON:0001017!7.80e-09!82;UBERON:0005743!2.72e-08!86;UBERON:0000955!5.62e-08!69;UBERON:0006238!5.62e-08!69;UBERON:0002405!5.87e-08!115;UBERON:0000073!3.07e-07!94;UBERON:0001016!3.07e-07!94;UBERON:0003075!3.72e-07!86;UBERON:0007284!3.72e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001872;1.71e-14;5 | |ontology_enrichment_uberon_v019=UBERON:0001872;1.71e-14;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,1.83e-14,5 | |||
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| ||
|short_description=p33@RGS12 | |short_description=p33@RGS12 | ||
}} | }} |
Latest revision as of 14:04, 17 September 2015
Short description: | p33@RGS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_RGS12_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 102bp_to_ENST00000506998_5end |
EntrezGene: | RGS12 |
HGNC: | 9994 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.61e-34 | 2 |
immature CD1a-positive Langerhans cell | 3.61e-34 | 2 |
Langerhans cell | 1.40e-14 | 5 |
immature conventional dendritic cell | 2.19e-12 | 5 |
common dendritic progenitor | 2.19e-12 | 5 |
conventional dendritic cell | 1.04e-08 | 8 |
dendritic cell | 2.32e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 1.83e-14 | 5 |