FFCP PHASE1:Hg19::chr17:74137321..74137337,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:74137321..74137337,-
|short_description=p1@FOXJ1
|description=CAGE_peak_1_at_FOXJ1_5end
|association_with_transcript=33bp_to_uc002jqx.2_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2302 | |EntrezGene=2302 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3816 | |HGNC=3816 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_uc002jqx.2_5end | |||
|cluster_id=chr17:74137321..74137337,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_FOXJ1_5end | |||
|id=chr17:74137321..74137337,- | |||
|ontology_enrichment_celltype=CL:0002057!1.46e-10!42;CL:0000860!2.96e-10!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.35e-13;33!CL:0002057;8.35e-13;33!CL:0000473;5.11e-08;39!CL:0000234;5.11e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.59e-10,42;CL:0002057,3.59e-10,42;CL:0000473,4.02e-08,48;CL:0000234,4.02e-08,48;CL:0000766,1.00e-07,72;CL:0000839,6.07e-07,66;CL:0000557,9.63e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.55e-18!57;UBERON:0005068!8.55e-18!57;UBERON:0006241!8.55e-18!57;UBERON:0007135!8.55e-18!57;UBERON:0001017!8.85e-18!82;UBERON:0005743!1.18e-16!86;UBERON:0000073!1.05e-14!94;UBERON:0001016!1.05e-14!94;UBERON:0002780!9.70e-14!41;UBERON:0001890!9.70e-14!41;UBERON:0006240!9.70e-14!41;UBERON:0002616!1.78e-13!59;UBERON:0007023!1.81e-13!115;UBERON:0000955!3.18e-13!69;UBERON:0006238!3.18e-13!69;UBERON:0003080!4.02e-13!42;UBERON:0002020!9.88e-12!34;UBERON:0003528!9.88e-12!34;UBERON:0001893!2.14e-11!34;UBERON:0002791!3.88e-11!33;UBERON:0001869!4.26e-10!32;UBERON:0003075!1.51e-09!86;UBERON:0007284!1.51e-09!86;UBERON:0002346!7.64e-09!90;UBERON:0000956!9.51e-08!25;UBERON:0000203!9.51e-08!25;UBERON:0003056!4.48e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.44e-11;41!UBERON:0001890;1.44e-11;41!UBERON:0003528;2.27e-11;34!UBERON:0002020;2.27e-11;34!UBERON:0000073;1.02e-10;53!UBERON:0002616;1.02e-10;53!UBERON:0001893;1.04e-10;34!UBERON:0002791;1.07e-10;32!UBERON:0001869;1.12e-09;32!UBERON:0000956;1.23e-08;25!UBERON:0000203;1.23e-08;25!UBERON:0002619;1.78e-07;22!UBERON:0001950;4.55e-07;20!UBERON:0000125;4.88e-07;9!UBERON:0002308;4.88e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.29e-18,56;UBERON:0005068,8.29e-18,56;UBERON:0006241,8.29e-18,56;UBERON:0007135,8.29e-18,56;UBERON:0000073,1.50e-16,53;UBERON:0002616,1.50e-16,53;UBERON:0001017,2.86e-15,81;UBERON:0001016,2.93e-14,89;UBERON:0002780,4.55e-14,41;UBERON:0001890,4.55e-14,41;UBERON:0003080,4.55e-14,41;UBERON:0006240,4.55e-14,41;UBERON:0003528,9.01e-14,34;UBERON:0002020,9.01e-14,34;UBERON:0000955,1.55e-12,68;UBERON:0006238,1.55e-12,68;UBERON:0001893,2.37e-12,34;UBERON:0002791,7.26e-12,32;UBERON:0001869,1.53e-10,32;UBERON:0007023,2.13e-10,114;UBERON:0003075,6.96e-10,82;UBERON:0007284,6.96e-10,82;UBERON:0002346,5.39e-09,86;UBERON:0000956,1.24e-08,25;UBERON:0000203,1.24e-08,25;UBERON:0003056,5.54e-08,61;UBERON:0002619,1.86e-07,22;UBERON:0000125,4.33e-07,9;UBERON:0002308,4.33e-07,9;UBERON:0001950,4.73e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,1.56727360739044,3.72106783270374,0.136874425072884,4.77062030460251,0,0,0,1.96682138424452,0.767658796194425,2.78669021968937,0,0,0,0,0,0.293600439334847,0,0.802177789880567,1.51907609501096,0,0,0,0.581592955118259,1.51150377475524,1.21292030593908,1.62700325833979,2.46700732813095,3.40677007984614,0.863077176966451,0.768482119587302,1.89185783910868,2.06847408441971,5.80936215225443,9.47985406160392,0.752969358170419,3.547779950752,4.71919317334678,2.44867113896722,2.56743221660875,1.27867425159808,0.329851300186716,0.598390972864896,1.27867425159808,0.870627715885752,2.26954089876456,5.60540024096017,2.26123798731069,1.0429658368404,1.73751075764093,1.21079900526674,1.47311054395026,5.69632297393592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,1.1384259382189,0.587237189370939,0.382273228125229,1.32171328579026,1.68152568894461,1.58030450865046,3.14735632182133,0.786021525498329,0.616804496998528,0,1.30368906653436,1.4203434172042,1.94826728407911,0.111410456885174,0.294605907474837,0.443067789167242,0.270803863765016,0,0,0,0,0,1.33457906845854,0.267540828089713,2.09071047609954,0.113309342697566,2.68254345521345,0.34362744548263,1.77113784413652,0,0,0.950452044448374,0.602300476311091,0.511946444617674,0,0,0,2.41928091869679,2.40696176205157,4.19990771260117,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,9.69245158683074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516628905878827,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,0.132529768321485,1.62671520017326,5.39037486079926,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,12.6470150479871,9.07955706526857,10.7306068412423,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.1673383622212,1.94064817373566,2.18183161675572,0,1.30139853857622,5.41302168944387,0.670065061337395,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,3.10419213877515,0,0,0,0,0,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,1.35359883872224,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,6.69766575710195,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,6.02520324971387,0,0,0,0,0,0,0,0.238231775457789,0,1.29694662238543,0.540031437238115,0.79312517629427,2.13648142254946,0,1.22520107990516,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,1.66849141711908,0,0,0,0,0,0,0.935702702041099,0,0,0,0,1.67121139316383,0.890894042497916,3.07160702099232,0,4.92342957436795,0,0,35.2579431573749,9.36465544780028,0,6.04638594850262,0,0.369254416383208,0,0.359473404589307,0,0.511572370226872,0.986434056369336,0,0,0,2.59750674853184,5.98841394003583,0,0.0874599999961957,0,0,3.0510438035132,12.2921594519327,0,0,0.173624994933292,15.9433449446491,12.421433178417,0,0.442317039724898,0,7.02033270892712,0,0,1.23120413606075,0,0.23056390438806,0.359030577639089,0,3.82801391678303,0,3.19820865611181,0,0,0,0,0,0,0,0.158936578980379,0,47.8272127906303,2.82706142867882,0.216388639742091,0,0,0,0,0,0,25.679831665638,0,7.96499115466153,0,0.391329237864179,0.242780379534093,1.18375320854817,0,5.81538247097931,0.063186579628488,1.80388103297391,0,0,0,0,0,4.55375273647668,0,1.38847790668105,0.489961987071888,0,26.9079069092726,0,0.0967563312890851,0.0730893170861856,0,0,0,1.35588444468319,0,0,0.759729551470544,46.5412290908831,0,0,0.39961921916426,36.1666947056806,0,59.7150592559637,0,0,0.471388069233591,0,0,0.101998217636322,0,0,1.36905378891993,0,0,1.57732412567589,0,0,0,0.399358000997982,0,0,0,0,2.32991899054908,0.157566364614447,0,0,2.26383207483922,0.0846733320657845,0,7.62739074224823,0.482259445395058,0.687697182986169,1.66176135211674,0,0,0.91124334987037,0,1.57611414598396,9.17955292362467,0,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,5.55916712354667,8.72735171501754,0,7.75296524548339,21.0371202758359,61.3096789888697,28.5824948189565,0.496166021811951,0.988058159489721,0.121792598380896,0,1.63205341010842,0.7520696820681,0.306345576763462,0.983617892129413,4.86867698375726,0.886068179966986,0,2.3786276834235,35.5513701327844,30.061772966487,9.62494245591443,0.691743174681154,0.124980407962107,0,0,0,0.936669811613763,8.11557760220621,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,2.90342715918635,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0.18410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| ||
|short_description=p1@FOXJ1 | |||
}} | }} |
Latest revision as of 14:04, 17 September 2015
Short description: | p1@FOXJ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXJ1_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 33bp_to_uc002jqx.2_5end |
EntrezGene: | FOXJ1 |
HGNC: | 3816 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.59e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.59e-10 | 42 |
defensive cell | 4.02e-08 | 48 |
phagocyte | 4.02e-08 | 48 |
myeloid leukocyte | 1.00e-07 | 72 |
myeloid lineage restricted progenitor cell | 6.07e-07 | 66 |
granulocyte monocyte progenitor cell | 9.63e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
neural tube | 8.29e-18 | 56 |
neural rod | 8.29e-18 | 56 |
future spinal cord | 8.29e-18 | 56 |
neural keel | 8.29e-18 | 56 |
regional part of nervous system | 1.50e-16 | 53 |
regional part of brain | 1.50e-16 | 53 |
central nervous system | 2.86e-15 | 81 |
nervous system | 2.93e-14 | 89 |
regional part of forebrain | 4.55e-14 | 41 |
forebrain | 4.55e-14 | 41 |
anterior neural tube | 4.55e-14 | 41 |
future forebrain | 4.55e-14 | 41 |
brain grey matter | 9.01e-14 | 34 |
gray matter | 9.01e-14 | 34 |
brain | 1.55e-12 | 68 |
future brain | 1.55e-12 | 68 |
telencephalon | 2.37e-12 | 34 |
regional part of telencephalon | 7.26e-12 | 32 |
cerebral hemisphere | 1.53e-10 | 32 |
adult organism | 2.13e-10 | 114 |
neural plate | 6.96e-10 | 82 |
presumptive neural plate | 6.96e-10 | 82 |
neurectoderm | 5.39e-09 | 86 |
cerebral cortex | 1.24e-08 | 25 |
pallium | 1.24e-08 | 25 |
pre-chordal neural plate | 5.54e-08 | 61 |
regional part of cerebral cortex | 1.86e-07 | 22 |
neural nucleus | 4.33e-07 | 9 |
nucleus of brain | 4.33e-07 | 9 |
neocortex | 4.73e-07 | 20 |