FFCP PHASE1:Hg19::chr1:155949397..155949414,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:155949397..155949414,-
|short_description=p21@ARHGEF2
|description=CAGE_peak_21_at_ARHGEF2_5end
|association_with_transcript=-316bp_to_ENST00000543433,uc01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9181 | |EntrezGene=9181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=682 | |HGNC=682 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3H5 | |UniProt=F5H3H5 | ||
|association_with_transcript=-316bp_to_ENST00000543433,uc010pgt.1_5end | |||
|cluster_id=chr1:155949397..155949414,- | |||
|description=CAGE_peak_21_at_ARHGEF2_5end | |||
|id=chr1:155949397..155949414,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;8.66e-10;1!UBERON:0004874;3.12e-09;1!UBERON:0005062;4.41e-09;4!UBERON:0007284;4.41e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.49e-17;2!DOID:4960;7.96e-10;1!DOID:0070004;7.96e-10;1!DOID:178;1.43e-09;1!DOID:326;1.43e-09;1!DOID:3978;1.43e-09;1!DOID:3394;1.43e-09;1!DOID:5844;1.43e-09;1!DOID:1287;3.13e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.62e-17,2;DOID:4960,7.98e-10,1;DOID:0070004,7.98e-10,1;DOID:178,1.56e-09,1;DOID:326,1.56e-09,1;DOID:3978,1.56e-09,1;DOID:3394,1.56e-09,1;DOID:5844,1.56e-09,1;DOID:1287,3.26e-09,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;8.13e-12;3!UBERON:0000946;8.13e-12;3!UBERON:0007100;2.58e-11;25!UBERON:0002146;9.42e-10;1!UBERON:0005623;9.42e-10;1!UBERON:0007029;1.43e-09;1!UBERON:0000989;3.12e-09;1!UBERON:0002135;3.12e-09;1!UBERON:0008811;3.12e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,8.36e-12,3;UBERON:0009751,8.36e-12,3;UBERON:0000946,8.36e-12,3;UBERON:0002523,8.36e-12,3;UBERON:0005983,8.36e-12,3;UBERON:0002165,8.36e-12,3;UBERON:0002062,8.36e-12,3;UBERON:0007280,8.36e-12,3;UBERON:0007100,1.75e-10,27;UBERON:0002146,9.44e-10,1;UBERON:0005623,9.44e-10,1;UBERON:0007029,1.32e-09,1;UBERON:0000989,2.77e-09,1;UBERON:0008811,2.77e-09,1;UBERON:0006258,2.77e-09,1;UBERON:0005876,2.77e-09,1;UBERON:0004874,2.77e-09,1;UBERON:0002135,3.25e-09,1 | |||
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| ||
|short_description=p21@ARHGEF2 | |||
}} | }} |
Latest revision as of 14:04, 17 September 2015
Short description: | p21@ARHGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_ARHGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -316bp_to_ENST00000543433, uc010pgt.1_5end |
EntrezGene: | ARHGEF2 |
HGNC: | 682 |
UniProt: | F5H3H5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 8.36e-12 | 3 |
cardiac mesenchyme | 8.36e-12 | 3 |
cardial valve | 8.36e-12 | 3 |
tunica intima | 8.36e-12 | 3 |
heart layer | 8.36e-12 | 3 |
endocardium | 8.36e-12 | 3 |
endocardial cushion | 8.36e-12 | 3 |
presumptive endocardium | 8.36e-12 | 3 |
primary circulatory organ | 1.75e-10 | 27 |
pulmonary valve | 9.44e-10 | 1 |
semi-lunar valve | 9.44e-10 | 1 |
surface | 1.32e-09 | 1 |
penis | 2.77e-09 | 1 |
intromittent organ | 2.77e-09 | 1 |
lateral plate mesenchyme | 2.77e-09 | 1 |
undifferentiated genital tubercle | 2.77e-09 | 1 |
somatopleure | 2.77e-09 | 1 |
mitral valve | 3.25e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.62e-17 | 2 |
bone marrow cancer | 7.98e-10 | 1 |
myeloma | 7.98e-10 | 1 |
vascular disease | 1.56e-09 | 1 |
ischemia | 1.56e-09 | 1 |
extrinsic cardiomyopathy | 1.56e-09 | 1 |
myocardial ischemia | 1.56e-09 | 1 |
myocardial infarction | 1.56e-09 | 1 |
cardiovascular system disease | 3.26e-09 | 4 |