FFCP PHASE1:Hg19::chr7:18126210..18126222,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9734 | |EntrezGene=9734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |HGNC=14065 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z917,Q9UKV0 | |UniProt=B7Z917,Q9UKV0 | ||
|association_with_transcript=-349bp_to_ENST00000262069,ENST00000417496,NM_001204144,uc011jya.1_5end | |||
|cluster_id=chr7:18126210..18126222,+ | |||
|description=CAGE_peak_25_at_HDAC9_5end | |||
|id=chr7:18126210..18126222,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;2.93e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,5.13e-23,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;2.45e-12;2!DOID:4236;2.45e-12;2!DOID:3119;2.64e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:154,3.62e-12,2;DOID:4236,3.62e-12,2;DOID:3119,2.52e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.72e-25!115;UBERON:0001049!9.57e-17!57;UBERON:0005068!9.57e-17!57;UBERON:0006241!9.57e-17!57;UBERON:0007135!9.57e-17!57;UBERON:0002616!6.60e-16!59;UBERON:0000955!1.44e-15!69;UBERON:0006238!1.44e-15!69;UBERON:0001017!9.35e-13!82;UBERON:0005743!1.23e-12!86;UBERON:0003075!4.59e-12!86;UBERON:0007284!4.59e-12!86;UBERON:0000073!2.01e-11!94;UBERON:0001016!2.01e-11!94;UBERON:0002346!3.80e-11!90;UBERON:0000477!7.87e-11!286;UBERON:0003080!1.12e-10!42;UBERON:0000153!1.87e-10!129;UBERON:0007811!1.87e-10!129;UBERON:0004733!3.71e-10!12;UBERON:0002028!3.71e-10!12;UBERON:0007277!3.71e-10!12;UBERON:0002298!6.00e-10!8;UBERON:0002780!1.18e-09!41;UBERON:0001890!1.18e-09!41;UBERON:0006240!1.18e-09!41;UBERON:0004111!1.45e-09!241;UBERON:0004732!3.17e-09!13;UBERON:0000033!3.74e-09!123;UBERON:0000025!7.23e-09!194;UBERON:0003296!4.34e-08!4;UBERON:0010133!4.34e-08!4;UBERON:0002619!4.64e-08!22;UBERON:0003076!9.66e-08!15;UBERON:0003057!9.66e-08!15;UBERON:0000481!1.30e-07!347;UBERON:0001950!1.31e-07!20;UBERON:0003056!2.50e-07!61;UBERON:0002020!2.73e-07!34;UBERON:0003528!2.73e-07!34;UBERON:0001893!5.38e-07!34;UBERON:0000956!8.16e-07!25;UBERON:0000203!8.16e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;2.93e-23;1!UBERON:0005352;2.93e-23;1!UBERON:0002702;2.45e-12;2!UBERON:0000078;2.45e-12;2!UBERON:0002012;2.45e-12;2!UBERON:0008886;2.45e-12;2!UBERON:0001870;1.17e-08;3!UBERON:0006947;1.17e-08;3!UBERON:0004054;1.17e-08;3!UBERON:0001052;8.37e-07;4!UBERON:0005904;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,4.10e-23,1;UBERON:0005352,4.10e-23,1;UBERON:0002702,1.65e-12,2;UBERON:0000078,3.24e-12,2;UBERON:0007497,3.24e-12,2;UBERON:0003643,3.24e-12,2;UBERON:0003504,3.24e-12,2;UBERON:0003469,3.24e-12,2;UBERON:0003496,3.24e-12,2;UBERON:0002012,3.24e-12,2;UBERON:0008886,3.24e-12,2;UBERON:0007303,3.24e-12,2;UBERON:0002061,3.24e-12,2;UBERON:0005432,3.24e-12,2;UBERON:0004363,3.24e-12,2;UBERON:0001870,8.96e-09,3;UBERON:0006947,1.30e-08,3;UBERON:0004054,1.30e-08,3;UBERON:0004145,1.40e-08,3;UBERON:0001052,7.70e-07,4;UBERON:0005904,9.11e-07,4 | |||
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| ||
|short_description=p25@HDAC9 | |||
}} | }} |
Latest revision as of 14:00, 17 September 2015
Short description: | p25@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_HDAC9_5end |
Coexpression cluster: | NA |
Association with transcript: | -349bp_to_ENST00000262069, ENST00000417496, NM_001204144, uc011jya.1_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | B7Z917Q9UKV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 5.13e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 4.10e-23 | 1 |
spermatic cord | 4.10e-23 | 1 |
middle frontal gyrus | 1.65e-12 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.24e-12 | 2 |
developing epithelial placode | 3.24e-12 | 2 |
respiratory system arterial blood vessel | 3.24e-12 | 2 |
respiratory system blood vessel | 3.24e-12 | 2 |
respiratory system artery | 3.24e-12 | 2 |
head blood vessel | 3.24e-12 | 2 |
pulmonary artery | 3.24e-12 | 2 |
pulmonary vascular system | 3.24e-12 | 2 |
pharyngeal vasculature | 3.24e-12 | 2 |
truncus arteriosus | 3.24e-12 | 2 |
aortic sac | 3.24e-12 | 2 |
pharyngeal arch artery | 3.24e-12 | 2 |
frontal cortex | 8.96e-09 | 3 |
male genital duct | 1.30e-08 | 3 |
internal male genitalia | 1.30e-08 | 3 |
outflow tract | 1.40e-08 | 3 |
rectum | 7.70e-07 | 4 |
duct of male reproductive system | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 3.62e-12 | 2 |
carcinosarcoma | 3.62e-12 | 2 |
gastrointestinal system cancer | 2.52e-07 | 14 |