FFCP PHASE1:Hg19::chr17:74068707..74068721,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:74068707..74068721,- to FFCP PHASE1:Hg19::chr17:74068707..74068721,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6730 | |EntrezGene=6730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11302 | |HGNC=11302 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHB9,F5H281,B3KMI9 | |UniProt=Q9UHB9,F5H281,B3KMI9 | ||
|association_with_transcript=-100bp_to_ENST00000307877,ENST00000540937,NM_014230,uc002jqk.1,uc002jql.1_5end | |||
|cluster_id=chr17:74068707..74068721,- | |||
|description=CAGE_peak_5_at_SRP68_5end | |||
|id=chr17:74068707..74068721,- | |||
|ontology_enrichment_celltype=CL:0000542!2.86e-07!53;CL:0000051!2.86e-07!53;CL:0000838!6.61e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0002363;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.70e-09,52;CL:0000542,1.15e-08,53;CL:0000051,1.15e-08,53;CL:0002363,9.19e-08,2;CL:0000008,9.19e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.80e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;6.80e-08;2!DOID:962;6.80e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,8.04e-08,2;DOID:962,8.04e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.48e-15;15!UBERON:0000179;9.48e-15;15!UBERON:0000463;9.48e-15;15!UBERON:0001874;1.72e-14;1!UBERON:0002331;7.59e-13;10!UBERON:0003714;6.80e-08;2!UBERON:0003566;6.80e-08;2!UBERON:0001777;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.32e-15,15;UBERON:0000179,9.32e-15,15;UBERON:0000463,9.32e-15,15;UBERON:0001874,1.41e-14,1;UBERON:0002331,7.59e-13,10;UBERON:0000358,7.59e-13,10;UBERON:0000307,7.59e-13,10;UBERON:0000091,7.59e-13,10;UBERON:0000087,7.59e-13,10;UBERON:0007010,7.59e-13,10;UBERON:0007806,7.59e-13,10;UBERON:0008780,7.59e-13,10;UBERON:0005728,7.59e-13,10;UBERON:0003714,8.04e-08,2;UBERON:0003566,9.19e-08,2;UBERON:0001777,9.19e-08,2 | |||
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| ||
|short_description=p5@SRP68 | |||
}} | }} |
Latest revision as of 13:47, 17 September 2015
Short description: | p5@SRP68 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SRP68_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000307877, ENST00000540937, NM_014230, uc002jqk.1, uc002jql.1_5end |
EntrezGene: | SRP68 |
HGNC: | 11302 |
UniProt: | Q9UHB9F5H281B3KMI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.70e-09 | 52 |
lymphocyte | 1.15e-08 | 53 |
common lymphoid progenitor | 1.15e-08 | 53 |
keratocyte | 9.19e-08 | 2 |
migratory cranial neural crest cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 9.32e-15 | 15 |
haemolymphatic fluid | 9.32e-15 | 15 |
organism substance | 9.32e-15 | 15 |
putamen | 1.41e-14 | 1 |
umbilical cord | 7.59e-13 | 10 |
blastocyst | 7.59e-13 | 10 |
blastula | 7.59e-13 | 10 |
bilaminar disc | 7.59e-13 | 10 |
inner cell mass | 7.59e-13 | 10 |
cleaving embryo | 7.59e-13 | 10 |
connecting stalk | 7.59e-13 | 10 |
inner cell mass derived epiblast | 7.59e-13 | 10 |
extraembryonic mesoderm | 7.59e-13 | 10 |
neural tissue | 8.04e-08 | 2 |
head connective tissue | 9.19e-08 | 2 |
substantia propria of cornea | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 8.04e-08 | 2 |
neurofibroma | 8.04e-08 | 2 |