FFCP PHASE1:Hg19::chr1:32169648..32169659,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1307 | |EntrezGene=1307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2193 | |HGNC=2193 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000532877_5end | |association_with_transcript=1bp_to_ENST00000532877_5end | ||
|cluster_id=chr1:32169648..32169659,- | |||
|coexpression_cluster_id=C2580 | |||
|description=CAGE_peak_6_at_COL16A1_5end | |description=CAGE_peak_6_at_COL16A1_5end | ||
|id=chr1:32169648..32169659,- | |id=chr1:32169648..32169659,- | ||
|ontology_enrichment_celltype=CL:0000055!3.24e-31!180;CL:0000680!1.32e-17!57;CL:0000056!1.32e-17!57;CL:0000355!1.32e-17!57;CL:0000057!1.40e-17!75;CL:0000183!8.14e-17!59;CL:0000187!1.84e-16!54;CL:0000192!1.68e-14!42;CL:0000514!1.68e-14!42;CL:0000393!1.14e-13!60;CL:0000211!1.14e-13!60;CL:0000359!4.45e-12!32;CL:0002334!6.63e-10!12;CL:0002371!3.66e-07!591 | |ontology_enrichment_celltype=CL:0000055!3.24e-31!180;CL:0000680!1.32e-17!57;CL:0000056!1.32e-17!57;CL:0000355!1.32e-17!57;CL:0000057!1.40e-17!75;CL:0000183!8.14e-17!59;CL:0000187!1.84e-16!54;CL:0000192!1.68e-14!42;CL:0000514!1.68e-14!42;CL:0000393!1.14e-13!60;CL:0000211!1.14e-13!60;CL:0000359!4.45e-12!32;CL:0002334!6.63e-10!12;CL:0002371!3.66e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.75e-17;12!CL:0000359;2.61e-16;32!CL:0002539;2.04e-11;10!CL:0000192;5.18e-10;43!CL:0000499;6.98e-10;28!CL:0000327;8.11e-10;15!CL:1000306;4.27e-07;4!CL:0002547;4.27e-07;4!CL:0000153;7.09e-07;9!CL:0000447;7.09e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.44e-19,76;CL:0002334,3.76e-17,12;CL:0000359,3.96e-17,32;CL:0000192,1.29e-13,43;CL:0000514,1.29e-13,43;CL:0000723,2.46e-13,433;CL:0000048,7.51e-13,427;CL:0000034,1.34e-12,441;CL:0000187,3.68e-12,55;CL:0000680,4.55e-12,58;CL:0000056,4.55e-12,58;CL:0000355,4.55e-12,58;CL:0002539,1.03e-11,10;CL:0000393,3.11e-10,61;CL:0000211,3.11e-10,61;CL:0000327,3.60e-10,15;CL:0000499,4.32e-10,28;CL:1000306,2.85e-07,4;CL:0002547,2.85e-07,4;CL:0000153,3.59e-07,9;CL:0000447,3.59e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;5.18e-10;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!2.68e-18!82;UBERON:0000914!2.41e-17!83;UBERON:0002329!2.41e-17!83;UBERON:0003077!2.41e-17!83;UBERON:0003059!2.41e-17!83;UBERON:0007282!2.41e-17!83;UBERON:0009618!2.41e-17!83;UBERON:0007285!2.41e-17!83;UBERON:0004290!3.68e-17!70;UBERON:0001134!4.19e-17!61;UBERON:0002036!4.19e-17!61;UBERON:0003082!4.19e-17!61;UBERON:0002385!7.14e-17!63;UBERON:0001015!7.14e-17!63;UBERON:0000383!7.14e-17!63;UBERON:0000475!1.08e-13!365;UBERON:0003102!3.69e-11!95;UBERON:0004573!3.22e-10!33;UBERON:0004571!3.22e-10!33;UBERON:0001637!3.74e-10!42;UBERON:0003509!3.74e-10!42;UBERON:0004572!3.74e-10!42;UBERON:0002100!6.20e-09!216;UBERON:0005256!2.78e-08!143;UBERON:0000468!6.14e-08!659;UBERON:0000479!8.95e-08!787;UBERON:0004872!1.05e-07!84;UBERON:0002199!1.11e-07!45;UBERON:0002416!1.11e-07!45;UBERON:0001135!4.11e-07!15;UBERON:0002097!7.15e-07!40;UBERON:0001981!8.50e-07!60;UBERON:0007500!8.50e-07!60;UBERON:0004537!8.50e-07!60;UBERON:0006965!8.50e-07!60;UBERON:0000481!9.88e-07!347 | |ontology_enrichment_uberon=UBERON:0000486!2.68e-18!82;UBERON:0000914!2.41e-17!83;UBERON:0002329!2.41e-17!83;UBERON:0003077!2.41e-17!83;UBERON:0003059!2.41e-17!83;UBERON:0007282!2.41e-17!83;UBERON:0009618!2.41e-17!83;UBERON:0007285!2.41e-17!83;UBERON:0004290!3.68e-17!70;UBERON:0001134!4.19e-17!61;UBERON:0002036!4.19e-17!61;UBERON:0003082!4.19e-17!61;UBERON:0002385!7.14e-17!63;UBERON:0001015!7.14e-17!63;UBERON:0000383!7.14e-17!63;UBERON:0000475!1.08e-13!365;UBERON:0003102!3.69e-11!95;UBERON:0004573!3.22e-10!33;UBERON:0004571!3.22e-10!33;UBERON:0001637!3.74e-10!42;UBERON:0003509!3.74e-10!42;UBERON:0004572!3.74e-10!42;UBERON:0002100!6.20e-09!216;UBERON:0005256!2.78e-08!143;UBERON:0000468!6.14e-08!659;UBERON:0000479!8.95e-08!787;UBERON:0004872!1.05e-07!84;UBERON:0002199!1.11e-07!45;UBERON:0002416!1.11e-07!45;UBERON:0001135!4.11e-07!15;UBERON:0002097!7.15e-07!40;UBERON:0001981!8.50e-07!60;UBERON:0007500!8.50e-07!60;UBERON:0004537!8.50e-07!60;UBERON:0006965!8.50e-07!60;UBERON:0000481!9.88e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.68e-15;33!UBERON:0004571;2.68e-15;33!UBERON:0004237;2.04e-11;10!UBERON:0004695;2.04e-11;10!UBERON:0002111;2.04e-11;10!UBERON:0004178;2.04e-11;10!UBERON:0004457;2.44e-11;9!UBERON:0000042;2.44e-11;9!UBERON:0001637;3.00e-11;42!UBERON:0003509;3.00e-11;42!UBERON:0004572;3.00e-11;42!UBERON:0003688;3.26e-11;6!UBERON:0002358;3.26e-11;6!UBERON:0003684;3.26e-11;6!UBERON:0001178;3.26e-11;6!UBERON:0000947;5.78e-10;21!UBERON:0010191;5.78e-10;21!UBERON:0004797;4.27e-07;4!UBERON:0000415;4.27e-07;4!UBERON:0007240;4.27e-07;4!UBERON:0005742;4.27e-07;4!UBERON:0005734;4.27e-07;4!UBERON:0004664;4.27e-07;4!UBERON:0004663;4.27e-07;4!UBERON:0001135;6.40e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,5.22e-17,33;UBERON:0004571,5.22e-17,33;UBERON:0001637,5.79e-16,42;UBERON:0003509,5.79e-16,42;UBERON:0004572,5.79e-16,42;UBERON:0001134,6.58e-12,62;UBERON:0002036,6.58e-12,62;UBERON:0003082,6.58e-12,62;UBERON:0000486,6.88e-12,83;UBERON:0004237,1.03e-11,10;UBERON:0004695,1.03e-11,10;UBERON:0002111,1.03e-11,10;UBERON:0004178,1.03e-11,10;UBERON:0002329,1.66e-11,71;UBERON:0003059,1.66e-11,71;UBERON:0007282,1.66e-11,71;UBERON:0004290,1.66e-11,71;UBERON:0009618,1.66e-11,71;UBERON:0002385,2.76e-11,64;UBERON:0001015,2.76e-11,64;UBERON:0000383,2.76e-11,64;UBERON:0003077,3.14e-11,72;UBERON:0007285,3.14e-11,72;UBERON:0003688,3.42e-11,6;UBERON:0002358,3.42e-11,6;UBERON:0003684,3.42e-11,6;UBERON:0001178,3.42e-11,6;UBERON:0007524,5.85e-11,73;UBERON:0000947,2.98e-10,21;UBERON:0010191,2.98e-10,21;UBERON:0007503,1.01e-09,78;UBERON:0007500,2.66e-09,59;UBERON:0001981,2.66e-09,59;UBERON:0004537,2.66e-09,59;UBERON:0006965,2.66e-09,59;UBERON:0002049,1.74e-08,78;UBERON:0007798,1.74e-08,78;UBERON:0004872,2.41e-08,83;UBERON:0004457,3.30e-08,12;UBERON:0000042,3.30e-08,12;UBERON:0000055,5.82e-08,68;UBERON:0000415,2.85e-07,4;UBERON:0007240,2.85e-07,4;UBERON:0005742,2.85e-07,4;UBERON:0005734,2.85e-07,4;UBERON:0004664,2.85e-07,4;UBERON:0004663,2.85e-07,4;UBERON:0001135,4.20e-07,15;UBERON:0002100,4.61e-07,199;UBERON:0004535,5.87e-07,109;UBERON:0002384,6.86e-07,371 | |||
|phase1_expression=13.2625216867506,2.14100523890983,14.9411668341729,12.0087958023756,15.1966772105278,11.3404008133048,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,0.495065411840187,0.331397375727916,2.01697543935533,1.80808358407193,2.92124036154949,3.41552959153355,0.369363174230364,0.816002764977012,1.56727360739044,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0.919421224478927,1.204823675113,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,1.44575660953827,3.00802746381534,1.30361867064741,1.5905718941022,3.40644409211845,0.189069634328136,0,0.263504357079378,0.458426764241994,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,6.95760732373446,4.05217637326655,5.95841313659485,10.3261183469573,1.77334191099179,0.560677600142307,4.2699598291882,2.71334303258876,0,0.538842688278752,0,2.72443369760877,4.60940739583999,0,0.936480230490962,0,0,0.469737994575059,0,0.561803226808994,0.408308342509787,0,0.206651562351531,0,0.989067717114227,0,1.43723628363248,0.168336113954066,0.375355559615893,0,1.31693286264251,0.30648779579902,0.600952235626387,0.794025282120147,1.25572744982203,1.92201649936711,0.847727604638247,2.70081986475962,1.13357782162283,3.09168648054755,1.30281799432113,2.02531598689519,1.36411807225678,1.26216887122057,0.736399189138395,0.161646056818812,2.13005755509969,0.403008392910561,0.508681776931463,0.966304265816484,1.09098448236334,0.573609190778008,0,0,0,0.10366105501537,0,0,7.8224766164908,7.07565032012174,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,2.94017422771084,0,0,0,0,0,0,1.42675371031213,1.1240175325762,0.201057944823262,0.833296006426766,0.651616610620649,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.335964256397719,0.567100388969546,0.716468181622786,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.897048674762886,2.1798003441664,0.22001485746285,22.4932785418533,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0,0,0.977208552881205,0,0,0.301439377059586,0,0.199945982364114,0,0,0,2.63587341040741,3.44585807502342,1.42636905040718,0.723906533337896,1.02738161275192,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.00034104211935,0.542530047399471,1.03985430765404,0,2.05013139544115,0.937131319941706,0.300946099727719,2.27407504055985,1.03473071292505,0,0.921845842708516,0.60818530127658,16.4472972268702,16.4708843429211,0,0,0,0,0,0.907170879989041,20.5929480489585,19.4896706075839,13.1910244383545,13.0701932240815,9.21073048320066,10.1337970320473,19.2943486378488,1.07946785661859,1.42049380250502,1.31403449622095,1.03850885836724,1.27831416305955,0,0.40101294060657,0.276242966807689,2.18147451512753,1.0925470080403,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0.386682873168488,0.308097234229289,0.307007349452259,0.413509717453592,1.18162269355101,0.580066775656914,0.426133137080504,1.86967274858148,0.661139661443912,0.384380134730212,0.510450849978337,0.50578890427775,0,6.92587163027408,2.7881490806424,5.23657086299351,2.12922412126809,1.73986598415015,4.07713282028624,1.43124886741991,5.21021717103534,0,0.38126038784765,0.511795582622668,0,1.27281299170375,3.92474320099615,0.539617372749944,0.823611089208164,0.824686816419805,1.01091240786658,0,1.26377536871694,1.95053495635836,5.11798328225697,0,0.409499734223957,1.55545975149084,1.13008116620243,2.2054613741845,0.66343897524122,1.31535265576129,0.578775534266688,0,1.62328301570163,0,2.25356482025793,0.286822704408103,0.294747123039363,0.7133421029625,0.354761064070598,1.68886108238131,1.64647446479951,0.379473173765715,0.349934720244983,1.05844323998063,1.34060455107157,0,0.188287601553558,0.86101074534246,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0.494411622680279,0,0.398495976502139,0,0,0,0.246169610922139,0.311039587661807,0,0,0,0.789147245095469,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0,0,0,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,3.21031058919516,0,0,0,0,0.394584402849391,0,0,2.0851571277401,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0.19871461170299,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0.223171457441873,0.201550417460179,5.40449825313605,0,0,0,0.13480708770837,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0.419636705079985,0,0,0.383830394638891,0,0,0.76280561296425,0,0,0,0,0,0,0.22662418304025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| ||
|short_description=p6@COL16A1 | |short_description=p6@COL16A1 | ||
}} | }} |
Latest revision as of 13:45, 17 September 2015
Short description: | p6@COL16A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_COL16A1_5end |
Coexpression cluster: | C2580_Fibroblast_Preadipocyte_Pericytes_Adipocyte_Hair_Ewing_Mesenchymal |
Association with transcript: | 1bp_to_ENST00000532877_5end |
EntrezGene: | COL16A1 |
HGNC: | 2193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.44e-19 | 76 |
preadipocyte | 3.76e-17 | 12 |
vascular associated smooth muscle cell | 3.96e-17 | 32 |
smooth muscle cell | 1.29e-13 | 43 |
smooth muscle myoblast | 1.29e-13 | 43 |
somatic stem cell | 2.46e-13 | 433 |
multi fate stem cell | 7.51e-13 | 427 |
stem cell | 1.34e-12 | 441 |
muscle cell | 3.68e-12 | 55 |
muscle precursor cell | 4.55e-12 | 58 |
myoblast | 4.55e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.55e-12 | 58 |
aortic smooth muscle cell | 1.03e-11 | 10 |
electrically responsive cell | 3.11e-10 | 61 |
electrically active cell | 3.11e-10 | 61 |
extracellular matrix secreting cell | 3.60e-10 | 15 |
stromal cell | 4.32e-10 | 28 |
fibroblast of tunica adventitia of artery | 2.85e-07 | 4 |
fibroblast of the aortic adventitia | 2.85e-07 | 4 |
GAG secreting cell | 3.59e-07 | 9 |
carbohydrate secreting cell | 3.59e-07 | 9 |