FFCP PHASE1:Hg19::chr6:292253..292329,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:292253..292329,+
|short_description=p3@DUSP22
|description=CAGE_peak_3_at_DUSP22_5end
|association_with_transcript=152bp_to_NM_020185,uc003msx.2,uc011dhn.1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56940 | |EntrezGene=56940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16077 | |HGNC=16077 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRW4 | |UniProt=Q9NRW4 | ||
|association_with_transcript=152bp_to_NM_020185,uc003msx.2,uc011dhn.1_5end | |||
|cluster_id=chr6:292253..292329,+ | |||
|description=CAGE_peak_3_at_DUSP22_5end | |||
|id=chr6:292253..292329,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.67e-17!65;CL:0002194!9.04e-17!63;CL:0000576!9.04e-17!63;CL:0000040!9.04e-17!63;CL:0000559!9.04e-17!63;CL:0002057!5.07e-16!42;CL:0000557!4.28e-15!71;CL:0000766!8.30e-15!76;CL:0000860!1.09e-14!45;CL:0000839!6.09e-13!70;CL:0000763!6.54e-11!112;CL:0000049!6.54e-11!112;CL:0000738!6.60e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.36e-14;33!CL:0002057;5.36e-14;33!CL:0000473;2.50e-13;39!CL:0000234;2.50e-13;39!CL:0000576;2.59e-10;48!CL:0000766;2.44e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.94e-19,61;CL:0002194,3.89e-18,59;CL:0000576,3.89e-18,59;CL:0000040,3.89e-18,59;CL:0000559,3.89e-18,59;CL:0000473,5.33e-18,48;CL:0000234,5.33e-18,48;CL:0000557,3.32e-16,67;CL:0000860,4.99e-16,42;CL:0002057,4.99e-16,42;CL:0000766,7.83e-16,72;CL:0000839,6.29e-14,66;CL:0000763,1.80e-11,108;CL:0000049,1.80e-11,108;CL:0000738,3.33e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.32e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.26e-19!112;UBERON:0002390!6.54e-19!102;UBERON:0003061!6.54e-19!102;UBERON:0007023!3.34e-16!115;UBERON:0002371!1.30e-14!80;UBERON:0002405!3.21e-12!115;UBERON:0001474!3.25e-12!86;UBERON:0003081!4.88e-12!216;UBERON:0004765!3.72e-10!101;UBERON:0001434!3.72e-10!101;UBERON:0000480!6.73e-08!626;UBERON:0000467!1.28e-07!625;UBERON:0002050!1.44e-07!605;UBERON:0005423!1.44e-07!605;UBERON:0000923!1.91e-07!604;UBERON:0005291!1.91e-07!604;UBERON:0006598!1.91e-07!604;UBERON:0002532!1.91e-07!604;UBERON:0000922!6.22e-07!612;UBERON:0000468!7.23e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.31e-20,108;UBERON:0002390,6.90e-20,98;UBERON:0003061,6.90e-20,98;UBERON:0007023,4.83e-16,114;UBERON:0002371,1.41e-15,76;UBERON:0002405,2.10e-15,93;UBERON:0003081,5.45e-13,203;UBERON:0001474,5.96e-13,82;UBERON:0004765,6.76e-12,90;UBERON:0001434,2.74e-10,100;UBERON:0002050,9.90e-10,564;UBERON:0000923,1.84e-09,560;UBERON:0010316,1.84e-09,560;UBERON:0005291,1.84e-09,560;UBERON:0006598,1.84e-09,560;UBERON:0010317,1.84e-09,560;UBERON:0002532,1.84e-09,560;UBERON:0005423,1.00e-08,581;UBERON:0000926,2.62e-08,315;UBERON:0004120,2.62e-08,315;UBERON:0006603,2.62e-08,315;UBERON:0000922,1.02e-07,592 | |||
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| ||
|short_description=p3@DUSP22 | |||
}} | }} |
Latest revision as of 13:44, 17 September 2015
Short description: | p3@DUSP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DUSP22_5end |
Coexpression cluster: | NA |
Association with transcript: | 152bp_to_NM_020185, uc003msx.2, uc011dhn.1_5end |
EntrezGene: | DUSP22 |
HGNC: | 16077 |
UniProt: | Q9NRW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 6.94e-19 | 61 |
monopoietic cell | 3.89e-18 | 59 |
monocyte | 3.89e-18 | 59 |
monoblast | 3.89e-18 | 59 |
promonocyte | 3.89e-18 | 59 |
defensive cell | 5.33e-18 | 48 |
phagocyte | 5.33e-18 | 48 |
granulocyte monocyte progenitor cell | 3.32e-16 | 67 |
classical monocyte | 4.99e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.99e-16 | 42 |
myeloid leukocyte | 7.83e-16 | 72 |
myeloid lineage restricted progenitor cell | 6.29e-14 | 66 |
myeloid cell | 1.80e-11 | 108 |
common myeloid progenitor | 1.80e-11 | 108 |
leukocyte | 3.33e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.31e-20 | 108 |
hematopoietic system | 6.90e-20 | 98 |
blood island | 6.90e-20 | 98 |
adult organism | 4.83e-16 | 114 |
bone marrow | 1.41e-15 | 76 |
immune system | 2.10e-15 | 93 |
lateral plate mesoderm | 5.45e-13 | 203 |
bone element | 5.96e-13 | 82 |
skeletal element | 6.76e-12 | 90 |
skeletal system | 2.74e-10 | 100 |
embryonic structure | 9.90e-10 | 564 |
germ layer | 1.84e-09 | 560 |
germ layer / neural crest | 1.84e-09 | 560 |
embryonic tissue | 1.84e-09 | 560 |
presumptive structure | 1.84e-09 | 560 |
germ layer / neural crest derived structure | 1.84e-09 | 560 |
epiblast (generic) | 1.84e-09 | 560 |
developing anatomical structure | 1.00e-08 | 581 |
mesoderm | 2.62e-08 | 315 |
mesoderm-derived structure | 2.62e-08 | 315 |
presumptive mesoderm | 2.62e-08 | 315 |
embryo | 1.02e-07 | 592 |